RNA–Protein interactions for RNA: ENST00000396872.7

SLC29A4-202, Transcript of solute carrier family 29 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC29A4, Length 5,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-202ENST00000396872 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
SLC29A4-202ENST00000396872 MTUS2Q5JR59 1369 aa24.68■■□□□ 1.54
SLC29A4-202ENST00000396872 NOP58Q9Y2X3 529 aaKnown RBP24.67■■□□□ 1.54
SLC29A4-202ENST00000396872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.54
SLC29A4-202ENST00000396872 PPP4R2Q9NY27 417 aa24.67■■□□□ 1.54
SLC29A4-202ENST00000396872 SIN3AQ96ST3 1273 aa24.67■■□□□ 1.54
SLC29A4-202ENST00000396872 B4GALNT3Q6L9W6 998 aa24.66■■□□□ 1.54
SLC29A4-202ENST00000396872 RBM19Q9Y4C8 960 aaKnown RBP24.65■■□□□ 1.54
SLC29A4-202ENST00000396872 GOLGA3Q08378 1498 aa24.64■■□□□ 1.53
SLC29A4-202ENST00000396872 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
SLC29A4-202ENST00000396872 BECN1Q14457 450 aa24.58■■□□□ 1.52
SLC29A4-202ENST00000396872 PPM1GO15355 546 aaPredicted RBP24.57■■□□□ 1.52
SLC29A4-202ENST00000396872 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
SLC29A4-202ENST00000396872 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
SLC29A4-202ENST00000396872 TRIM44Q96DX7 344 aaPredicted RBP24.55■■□□□ 1.52
SLC29A4-202ENST00000396872 EEA1Q15075 1411 aa24.49■■□□□ 1.51
SLC29A4-202ENST00000396872 TSHZ2Q9NRE2 1034 aa24.48■■□□□ 1.51
SLC29A4-202ENST00000396872 TSPY4P0CV99 314 aa24.45■■□□□ 1.51
SLC29A4-202ENST00000396872 TSPY10P0CW01 314 aa24.45■■□□□ 1.51
SLC29A4-202ENST00000396872 ERICH6BQ5W0A0 696 aa24.45■■□□□ 1.5
SLC29A4-202ENST00000396872 RGS3P49796 1198 aa24.44■■□□□ 1.5
SLC29A4-202ENST00000396872 NAP1L5Q96NT1 182 aaPredicted RBP24.41■■□□□ 1.5
SLC29A4-202ENST00000396872 RGL3Q3MIN7 710 aa24.39■■□□□ 1.49
SLC29A4-202ENST00000396872 NCLP19338 710 aaKnown RBP24.37■■□□□ 1.49
SLC29A4-202ENST00000396872 MYH16Q9H6N6 1097 aa24.34■■□□□ 1.49
SLC29A4-202ENST00000396872 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
SLC29A4-202ENST00000396872 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
SLC29A4-202ENST00000396872 GOLGA6L22H0YM25 854 aa24.32■■□□□ 1.48
SLC29A4-202ENST00000396872 CARD11Q9BXL7 1154 aa24.31■■□□□ 1.48
SLC29A4-202ENST00000396872 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
SLC29A4-202ENST00000396872 CCER2I3L3R5 266 aa24.29■■□□□ 1.48
SLC29A4-202ENST00000396872 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
SLC29A4-202ENST00000396872 NEUROD2Q15784 382 aa24.27■■□□□ 1.48
SLC29A4-202ENST00000396872 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
SLC29A4-202ENST00000396872 KNSTRNQ9Y448 316 aa24.23■■□□□ 1.47
SLC29A4-202ENST00000396872 TPRNQ4KMQ1 711 aa24.23■■□□□ 1.47
SLC29A4-202ENST00000396872 PTMAP06454 111 aaKnown RBP24.23■■□□□ 1.47
SLC29A4-202ENST00000396872 FRAT1Q92837 279 aaPredicted RBP24.21■■□□□ 1.47
SLC29A4-202ENST00000396872 DNTTIP2Q5QJE6 756 aaKnown RBP24.19■■□□□ 1.46
SLC29A4-202ENST00000396872 CC2D1BQ5T0F9 858 aaKnown RBP24.19■■□□□ 1.46
SLC29A4-202ENST00000396872 SOGA1O94964 1423 aa24.19■■□□□ 1.46
SLC29A4-202ENST00000396872 FTSJ3Q8IY81 847 aaKnown RBP24.18■■□□□ 1.46
SLC29A4-202ENST00000396872 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.16■■□□□ 1.46
SLC29A4-202ENST00000396872 HSPA5P11021 654 aaKnown RBP24.12■■□□□ 1.45
SLC29A4-202ENST00000396872 ESF1Q9H501 851 aaKnown RBP24.12■■□□□ 1.45
SLC29A4-202ENST00000396872 TNNT2P45379 298 aaPredicted RBP24.11■■□□□ 1.45
SLC29A4-202ENST00000396872 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
SLC29A4-202ENST00000396872 SPRYD3Q8NCJ5 442 aa24.1■■□□□ 1.45
SLC29A4-202ENST00000396872 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
SLC29A4-202ENST00000396872 KANK4Q5T7N3 995 aaPredicted RBP24.08■■□□□ 1.45
SLC29A4-202ENST00000396872 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
SLC29A4-202ENST00000396872 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
SLC29A4-202ENST00000396872 TIMELESSQ9UNS1 1208 aa24.07■■□□□ 1.44
SLC29A4-202ENST00000396872 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
SLC29A4-202ENST00000396872 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
SLC29A4-202ENST00000396872 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
SLC29A4-202ENST00000396872 HSP90AB1P08238 724 aaKnown RBP24.04■■□□□ 1.44
SLC29A4-202ENST00000396872 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
SLC29A4-202ENST00000396872 PLCB2Q00722 1185 aa24.02■■□□□ 1.44
SLC29A4-202ENST00000396872 CDCA8Q53HL2 280 aa24.02■■□□□ 1.44
SLC29A4-202ENST00000396872 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
SLC29A4-202ENST00000396872 VPS8Q8N3P4 1428 aa24■■□□□ 1.43
SLC29A4-202ENST00000396872 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
SLC29A4-202ENST00000396872 L1TD1Q5T7N2 865 aaKnown RBP23.98■■□□□ 1.43
SLC29A4-202ENST00000396872 IPO9Q96P70 1041 aaKnown RBP23.98■■□□□ 1.43
SLC29A4-202ENST00000396872 CASC1Q6TDU7 716 aa23.97■■□□□ 1.43
SLC29A4-202ENST00000396872 RAB3GAP2Q9H2M9 1393 aa23.96■■□□□ 1.43
SLC29A4-202ENST00000396872 FOXD1Q16676 465 aa23.95■■□□□ 1.43
SLC29A4-202ENST00000396872 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.42
SLC29A4-202ENST00000396872 HSCBQ8IWL3 235 aa23.93■■□□□ 1.42
SLC29A4-202ENST00000396872 SLKQ9H2G2 1235 aaPredicted RBP23.93■■□□□ 1.42
SLC29A4-202ENST00000396872 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
SLC29A4-202ENST00000396872 RCAN3Q9UKA8 241 aa23.93■■□□□ 1.42
SLC29A4-202ENST00000396872 GZF1Q9H116 711 aaPredicted RBP23.93■■□□□ 1.42
SLC29A4-202ENST00000396872 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
SLC29A4-202ENST00000396872 TCERG1O14776 1098 aaKnown RBP23.91■■□□□ 1.42
SLC29A4-202ENST00000396872 NPM1P06748 294 aaKnown RBP eCLIP23.91■■□□□ 1.42
SLC29A4-202ENST00000396872 PLEKHG5O94827 1062 aa23.89■■□□□ 1.42
SLC29A4-202ENST00000396872 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
SLC29A4-202ENST00000396872 MSNP26038 577 aaKnown RBP23.86■■□□□ 1.41
SLC29A4-202ENST00000396872 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
SLC29A4-202ENST00000396872 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
SLC29A4-202ENST00000396872 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
SLC29A4-202ENST00000396872 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
SLC29A4-202ENST00000396872 TMF1P82094 1093 aa23.83■■□□□ 1.41
SLC29A4-202ENST00000396872 ZRSR1Q15695 479 aaKnown RBP23.83■■□□□ 1.41
SLC29A4-202ENST00000396872 NUDCQ9Y266 331 aa23.83■■□□□ 1.4
SLC29A4-202ENST00000396872 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.4
SLC29A4-202ENST00000396872 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
SLC29A4-202ENST00000396872 PNNQ9H307 717 aaKnown RBP23.81■■□□□ 1.4
SLC29A4-202ENST00000396872 ARID3AQ99856 593 aa23.8■■□□□ 1.4
SLC29A4-202ENST00000396872 MS4A1P11836 297 aa23.77■■□□□ 1.4
SLC29A4-202ENST00000396872 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
SLC29A4-202ENST00000396872 KTN1Q86UP2 1357 aaKnown RBP23.75■■□□□ 1.39
SLC29A4-202ENST00000396872 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
SLC29A4-202ENST00000396872 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
SLC29A4-202ENST00000396872 TAOK2Q9UL54 1235 aa23.71■■□□□ 1.39
SLC29A4-202ENST00000396872 PKD2Q13563 968 aa23.7■■□□□ 1.39
SLC29A4-202ENST00000396872 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
SLC29A4-202ENST00000396872 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms