RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CCNB3Q8WWL7 1395 aa24.73■■□□□ 1.55
TRIM39-205ENST00000396551 CFAP43Q8NDM7 1665 aa24.73■■□□□ 1.55
TRIM39-205ENST00000396551 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
TRIM39-205ENST00000396551 EFCAB5A4FU69 1503 aa24.72■■□□□ 1.55
TRIM39-205ENST00000396551 P3H3Q8IVL6 736 aa24.72■■□□□ 1.55
TRIM39-205ENST00000396551 LRRC9Q6ZRR7 1453 aa24.71■■□□□ 1.55
TRIM39-205ENST00000396551 FHOD3Q2V2M9 1422 aa24.71■■□□□ 1.55
TRIM39-205ENST00000396551 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
TRIM39-205ENST00000396551 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
TRIM39-205ENST00000396551 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
TRIM39-205ENST00000396551 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
TRIM39-205ENST00000396551 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.53
TRIM39-205ENST00000396551 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
TRIM39-205ENST00000396551 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■■■■ 29.2
TRIM39-205ENST00000396551 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
TRIM39-205ENST00000396551 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
TRIM39-205ENST00000396551 CLSPNQ9HAW4 1339 aa24.58■■□□□ 1.53
TRIM39-205ENST00000396551 SAMD9Q5K651 1589 aa24.58■■□□□ 1.52
TRIM39-205ENST00000396551 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
TRIM39-205ENST00000396551 ITGAEP38570 1179 aa24.53■■□□□ 1.52
TRIM39-205ENST00000396551 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
TRIM39-205ENST00000396551 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
TRIM39-205ENST00000396551 MRC2Q9UBG0 1479 aa24.52■■□□□ 1.52
TRIM39-205ENST00000396551 FMN1Q68DA7 1419 aa24.51■■□□□ 1.51
TRIM39-205ENST00000396551 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
TRIM39-205ENST00000396551 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
TRIM39-205ENST00000396551 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
TRIM39-205ENST00000396551 GRIN2BQ13224 1484 aa24.4■■□□□ 1.5
TRIM39-205ENST00000396551 FAM50AQ14320 339 aaKnown RBP24.39■■□□□ 1.49
TRIM39-205ENST00000396551 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
TRIM39-205ENST00000396551 WDR62O43379 1518 aa24.36■■□□□ 1.49
TRIM39-205ENST00000396551 MAPKBP1O60336 1514 aa24.35■■□□□ 1.49
TRIM39-205ENST00000396551 THOC2Q8NI27 1593 aaKnown RBP24.35■■□□□ 1.49
TRIM39-205ENST00000396551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.33■■□□□ 1.48
TRIM39-205ENST00000396551 IQGAP2Q13576 1575 aa24.33■■□□□ 1.48
TRIM39-205ENST00000396551 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
TRIM39-205ENST00000396551 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
TRIM39-205ENST00000396551 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
TRIM39-205ENST00000396551 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
TRIM39-205ENST00000396551 FGD6Q6ZV73 1430 aa24.3■■□□□ 1.48
TRIM39-205ENST00000396551 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
TRIM39-205ENST00000396551 SUPT6HQ7KZ85 1726 aaKnown RBP24.24■■□□□ 1.47
TRIM39-205ENST00000396551 EHBP1L1Q8N3D4 1523 aa24.24■■□□□ 1.47
TRIM39-205ENST00000396551 ACIN1Q9UKV3 1341 aaKnown RBP24.24■■□□□ 1.47
TRIM39-205ENST00000396551 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
TRIM39-205ENST00000396551 NEUROD1Q13562 356 aa24.23■■□□□ 1.47
TRIM39-205ENST00000396551 MIER1Q8N108 512 aa24.22■■□□□ 1.47
TRIM39-205ENST00000396551 HECW1Q76N89 1606 aa24.2■■□□□ 1.47
TRIM39-205ENST00000396551 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
TRIM39-205ENST00000396551 UGGT2Q9NYU1 1516 aa24.19■■□□□ 1.46
TRIM39-205ENST00000396551 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
TRIM39-205ENST00000396551 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
TRIM39-205ENST00000396551 ARHGEF11O15085 1522 aa24.18■■□□□ 1.46
TRIM39-205ENST00000396551 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
TRIM39-205ENST00000396551 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
TRIM39-205ENST00000396551 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
TRIM39-205ENST00000396551 CENPBP07199 599 aaPredicted RBP24.12■■□□□ 1.45
TRIM39-205ENST00000396551 PTPN23Q9H3S7 1636 aa24.11■■□□□ 1.45
TRIM39-205ENST00000396551 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
TRIM39-205ENST00000396551 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
TRIM39-205ENST00000396551 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
TRIM39-205ENST00000396551 KIAA0556O60303 1618 aa24.09■■□□□ 1.45
TRIM39-205ENST00000396551 DISP1Q96F81 1524 aa24.09■■□□□ 1.45
TRIM39-205ENST00000396551 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.44
TRIM39-205ENST00000396551 HFM1A2PYH4 1435 aa24.08■■□□□ 1.44
TRIM39-205ENST00000396551 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
TRIM39-205ENST00000396551 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
TRIM39-205ENST00000396551 NAIPQ13075 1403 aa24.02■■□□□ 1.44
TRIM39-205ENST00000396551 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
TRIM39-205ENST00000396551 YTHDC1Q96MU7 727 aaKnown RBP23.99■■□□□ 1.43
TRIM39-205ENST00000396551 CEP170Q5SW79 1584 aa23.98■■□□□ 1.43
TRIM39-205ENST00000396551 ARID3CA6NKF2 412 aa23.97■■□□□ 1.43
TRIM39-205ENST00000396551 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
TRIM39-205ENST00000396551 RAPGEF6Q8TEU7 1601 aa23.96■■□□□ 1.43
TRIM39-205ENST00000396551 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
TRIM39-205ENST00000396551 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
TRIM39-205ENST00000396551 GCC2Q8IWJ2 1684 aa23.93■■□□□ 1.42
TRIM39-205ENST00000396551 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
TRIM39-205ENST00000396551 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
TRIM39-205ENST00000396551 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
TRIM39-205ENST00000396551 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.42
TRIM39-205ENST00000396551 KDM6BO15054 1643 aa23.85■■□□□ 1.41
TRIM39-205ENST00000396551 NUP160Q12769 1436 aa23.85■■□□□ 1.41
TRIM39-205ENST00000396551 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
TRIM39-205ENST00000396551 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
TRIM39-205ENST00000396551 CHIC2Q9UKJ5 165 aa23.85■■□□□ 1.41
TRIM39-205ENST00000396551 PPP1R15AO75807 674 aaPredicted RBP23.85■■□□□ 1.41
TRIM39-205ENST00000396551 FBLN2P98095 1184 aa23.81■■□□□ 1.4
TRIM39-205ENST00000396551 PLB1Q6P1J6 1458 aa23.8■■□□□ 1.4
TRIM39-205ENST00000396551 DENND4BO75064 1496 aaPredicted RBP23.79■■□□□ 1.4
TRIM39-205ENST00000396551 DNMT1P26358 1616 aaKnown RBP23.77■■□□□ 1.4
TRIM39-205ENST00000396551 TONSLQ96HA7 1378 aa23.77■■□□□ 1.4
TRIM39-205ENST00000396551 DAPK1P53355 1430 aa23.76■■□□□ 1.39
TRIM39-205ENST00000396551 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
TRIM39-205ENST00000396551 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
TRIM39-205ENST00000396551 KDM5BQ9UGL1 1544 aa23.74■■□□□ 1.39
TRIM39-205ENST00000396551 TROQ12816 1431 aaPredicted RBP23.74■■□□□ 1.39
TRIM39-205ENST00000396551 CARMIL2Q6F5E8 1435 aa23.74■■□□□ 1.39
TRIM39-205ENST00000396551 CDK11AQ9UQ88 783 aaPredicted RBP23.73■■□□□ 1.39
TRIM39-205ENST00000396551 ABCC5O15440 1437 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms