RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
PDE1C-206ENST00000396193 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
PDE1C-206ENST00000396193 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
PDE1C-206ENST00000396193 ERICH6BQ5W0A0 696 aa23.63■■□□□ 1.37
PDE1C-206ENST00000396193 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
PDE1C-206ENST00000396193 RBM19Q9Y4C8 960 aaKnown RBP23.61■■□□□ 1.37
PDE1C-206ENST00000396193 KDM2AQ9Y2K7 1162 aa23.61■■□□□ 1.37
PDE1C-206ENST00000396193 DEKP35659 375 aaKnown RBP23.58■■□□□ 1.37
PDE1C-206ENST00000396193 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.37
PDE1C-206ENST00000396193 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
PDE1C-206ENST00000396193 BECN1Q14457 450 aa23.53■■□□□ 1.36
PDE1C-206ENST00000396193 TRIM44Q96DX7 344 aaPredicted RBP23.52■■□□□ 1.36
PDE1C-206ENST00000396193 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
PDE1C-206ENST00000396193 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
PDE1C-206ENST00000396193 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
PDE1C-206ENST00000396193 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
PDE1C-206ENST00000396193 TSHZ2Q9NRE2 1034 aa23.48■■□□□ 1.35
PDE1C-206ENST00000396193 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
PDE1C-206ENST00000396193 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
PDE1C-206ENST00000396193 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
PDE1C-206ENST00000396193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.35
PDE1C-206ENST00000396193 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
PDE1C-206ENST00000396193 CCER2I3L3R5 266 aa23.43■■□□□ 1.34
PDE1C-206ENST00000396193 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
PDE1C-206ENST00000396193 NAP1L5Q96NT1 182 aaPredicted RBP23.38■■□□□ 1.33
PDE1C-206ENST00000396193 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
PDE1C-206ENST00000396193 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
PDE1C-206ENST00000396193 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
PDE1C-206ENST00000396193 GOLGA6L22H0YM25 854 aa23.29■■□□□ 1.32
PDE1C-206ENST00000396193 SOGA1O94964 1423 aa23.27■■□□□ 1.32
PDE1C-206ENST00000396193 KIF27Q86VH2 1401 aa23.27■■□□□ 1.31
PDE1C-206ENST00000396193 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
PDE1C-206ENST00000396193 RGS3P49796 1198 aa23.23■■□□□ 1.31
PDE1C-206ENST00000396193 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
PDE1C-206ENST00000396193 RGL3Q3MIN7 710 aa23.21■■□□□ 1.31
PDE1C-206ENST00000396193 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
PDE1C-206ENST00000396193 KNSTRNQ9Y448 316 aa23.18■■□□□ 1.3
PDE1C-206ENST00000396193 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
PDE1C-206ENST00000396193 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.3
PDE1C-206ENST00000396193 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
PDE1C-206ENST00000396193 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
PDE1C-206ENST00000396193 PTMAP06454 111 aaKnown RBP23.11■■□□□ 1.29
PDE1C-206ENST00000396193 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PDE1C-206ENST00000396193 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
PDE1C-206ENST00000396193 L1TD1Q5T7N2 865 aaKnown RBP23.1■■□□□ 1.29
PDE1C-206ENST00000396193 KANK4Q5T7N3 995 aaPredicted RBP23.1■■□□□ 1.29
PDE1C-206ENST00000396193 DNTTIP2Q5QJE6 756 aaKnown RBP23.09■■□□□ 1.29
PDE1C-206ENST00000396193 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
PDE1C-206ENST00000396193 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.07■■□□□ 1.28
PDE1C-206ENST00000396193 FTSJ3Q8IY81 847 aaKnown RBP23.05■■□□□ 1.28
PDE1C-206ENST00000396193 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
PDE1C-206ENST00000396193 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
PDE1C-206ENST00000396193 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
PDE1C-206ENST00000396193 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
PDE1C-206ENST00000396193 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
PDE1C-206ENST00000396193 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
PDE1C-206ENST00000396193 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
PDE1C-206ENST00000396193 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
PDE1C-206ENST00000396193 FRAT1Q92837 279 aaPredicted RBP23.01■■□□□ 1.27
PDE1C-206ENST00000396193 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
PDE1C-206ENST00000396193 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
PDE1C-206ENST00000396193 IPO9Q96P70 1041 aaKnown RBP23■■□□□ 1.27
PDE1C-206ENST00000396193 ESF1Q9H501 851 aaKnown RBP22.99■■□□□ 1.27
PDE1C-206ENST00000396193 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
PDE1C-206ENST00000396193 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
PDE1C-206ENST00000396193 NACADO15069 1562 aa22.96■■□□□ 1.27
PDE1C-206ENST00000396193 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
PDE1C-206ENST00000396193 PNNQ9H307 717 aaKnown RBP22.92■■□□□ 1.26
PDE1C-206ENST00000396193 RCAN3Q9UKA8 241 aa22.91■■□□□ 1.26
PDE1C-206ENST00000396193 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
PDE1C-206ENST00000396193 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDE1C-206ENST00000396193 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
PDE1C-206ENST00000396193 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
PDE1C-206ENST00000396193 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
PDE1C-206ENST00000396193 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.25
PDE1C-206ENST00000396193 MSNP26038 577 aaKnown RBP22.87■■□□□ 1.25
PDE1C-206ENST00000396193 MS4A1P11836 297 aa22.87■■□□□ 1.25
PDE1C-206ENST00000396193 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
PDE1C-206ENST00000396193 TMF1P82094 1093 aa22.86■■□□□ 1.25
PDE1C-206ENST00000396193 CDK11BP21127 795 aaKnown RBP22.86■■□□□ 1.25
PDE1C-206ENST00000396193 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
PDE1C-206ENST00000396193 HSCBQ8IWL3 235 aa22.85■■□□□ 1.25
PDE1C-206ENST00000396193 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
PDE1C-206ENST00000396193 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
PDE1C-206ENST00000396193 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
PDE1C-206ENST00000396193 FANCIQ9NVI1 1328 aa22.83■■□□□ 1.25
PDE1C-206ENST00000396193 USP35Q9P2H5 1018 aa22.83■■□□□ 1.25
PDE1C-206ENST00000396193 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
PDE1C-206ENST00000396193 FOXD1Q16676 465 aa22.8■■□□□ 1.24
PDE1C-206ENST00000396193 CHMP4BQ9H444 224 aaKnown RBP22.79■■□□□ 1.24
PDE1C-206ENST00000396193 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
PDE1C-206ENST00000396193 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
PDE1C-206ENST00000396193 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
PDE1C-206ENST00000396193 KTN1Q86UP2 1357 aaKnown RBP22.78■■□□□ 1.24
PDE1C-206ENST00000396193 CUX2O14529 1486 aa22.78■■□□□ 1.24
PDE1C-206ENST00000396193 RALBP1Q15311 655 aa22.77■■□□□ 1.24
PDE1C-206ENST00000396193 PLCB2Q00722 1185 aa22.76■■□□□ 1.23
PDE1C-206ENST00000396193 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
PDE1C-206ENST00000396193 SLKQ9H2G2 1235 aaPredicted RBP22.74■■□□□ 1.23
PDE1C-206ENST00000396193 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms