RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
PDE1C-206ENST00000396193 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
PDE1C-206ENST00000396193 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
PDE1C-206ENST00000396193 ERICH6BQ5W0A0 696 aa23.63■■□□□ 1.37
PDE1C-206ENST00000396193 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
PDE1C-206ENST00000396193 RBM19Q9Y4C8 960 aaKnown RBP23.61■■□□□ 1.37
PDE1C-206ENST00000396193 KDM2AQ9Y2K7 1162 aa23.61■■□□□ 1.37
PDE1C-206ENST00000396193 DEKP35659 375 aaKnown RBP23.58■■□□□ 1.37
PDE1C-206ENST00000396193 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.37
PDE1C-206ENST00000396193 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
PDE1C-206ENST00000396193 BECN1Q14457 450 aa23.53■■□□□ 1.36
PDE1C-206ENST00000396193 TRIM44Q96DX7 344 aaPredicted RBP23.52■■□□□ 1.36
PDE1C-206ENST00000396193 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
PDE1C-206ENST00000396193 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
PDE1C-206ENST00000396193 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
PDE1C-206ENST00000396193 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
PDE1C-206ENST00000396193 TSHZ2Q9NRE2 1034 aa23.48■■□□□ 1.35
PDE1C-206ENST00000396193 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
PDE1C-206ENST00000396193 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
PDE1C-206ENST00000396193 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
PDE1C-206ENST00000396193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.35
PDE1C-206ENST00000396193 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
PDE1C-206ENST00000396193 CCER2I3L3R5 266 aa23.43■■□□□ 1.34
PDE1C-206ENST00000396193 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
PDE1C-206ENST00000396193 NAP1L5Q96NT1 182 aaPredicted RBP23.38■■□□□ 1.33
PDE1C-206ENST00000396193 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
PDE1C-206ENST00000396193 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
PDE1C-206ENST00000396193 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
PDE1C-206ENST00000396193 GOLGA6L22H0YM25 854 aa23.29■■□□□ 1.32
PDE1C-206ENST00000396193 SOGA1O94964 1423 aa23.27■■□□□ 1.32
PDE1C-206ENST00000396193 KIF27Q86VH2 1401 aa23.27■■□□□ 1.31
PDE1C-206ENST00000396193 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
PDE1C-206ENST00000396193 RGS3P49796 1198 aa23.23■■□□□ 1.31
PDE1C-206ENST00000396193 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
PDE1C-206ENST00000396193 RGL3Q3MIN7 710 aa23.21■■□□□ 1.31
PDE1C-206ENST00000396193 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
PDE1C-206ENST00000396193 KNSTRNQ9Y448 316 aa23.18■■□□□ 1.3
PDE1C-206ENST00000396193 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
PDE1C-206ENST00000396193 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.3
PDE1C-206ENST00000396193 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
PDE1C-206ENST00000396193 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
PDE1C-206ENST00000396193 PTMAP06454 111 aaKnown RBP23.11■■□□□ 1.29
PDE1C-206ENST00000396193 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PDE1C-206ENST00000396193 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
PDE1C-206ENST00000396193 L1TD1Q5T7N2 865 aaKnown RBP23.1■■□□□ 1.29
PDE1C-206ENST00000396193 KANK4Q5T7N3 995 aaPredicted RBP23.1■■□□□ 1.29
PDE1C-206ENST00000396193 DNTTIP2Q5QJE6 756 aaKnown RBP23.09■■□□□ 1.29
PDE1C-206ENST00000396193 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
PDE1C-206ENST00000396193 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.07■■□□□ 1.28
PDE1C-206ENST00000396193 FTSJ3Q8IY81 847 aaKnown RBP23.05■■□□□ 1.28
PDE1C-206ENST00000396193 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
PDE1C-206ENST00000396193 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
PDE1C-206ENST00000396193 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
PDE1C-206ENST00000396193 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
PDE1C-206ENST00000396193 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
PDE1C-206ENST00000396193 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
PDE1C-206ENST00000396193 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
PDE1C-206ENST00000396193 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
PDE1C-206ENST00000396193 FRAT1Q92837 279 aaPredicted RBP23.01■■□□□ 1.27
PDE1C-206ENST00000396193 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
PDE1C-206ENST00000396193 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
PDE1C-206ENST00000396193 IPO9Q96P70 1041 aaKnown RBP23■■□□□ 1.27
PDE1C-206ENST00000396193 ESF1Q9H501 851 aaKnown RBP22.99■■□□□ 1.27
PDE1C-206ENST00000396193 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
PDE1C-206ENST00000396193 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
PDE1C-206ENST00000396193 NACADO15069 1562 aa22.96■■□□□ 1.27
PDE1C-206ENST00000396193 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
PDE1C-206ENST00000396193 PNNQ9H307 717 aaKnown RBP22.92■■□□□ 1.26
PDE1C-206ENST00000396193 RCAN3Q9UKA8 241 aa22.91■■□□□ 1.26
PDE1C-206ENST00000396193 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
PDE1C-206ENST00000396193 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDE1C-206ENST00000396193 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
PDE1C-206ENST00000396193 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
PDE1C-206ENST00000396193 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
PDE1C-206ENST00000396193 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.25
PDE1C-206ENST00000396193 MSNP26038 577 aaKnown RBP22.87■■□□□ 1.25
PDE1C-206ENST00000396193 MS4A1P11836 297 aa22.87■■□□□ 1.25
PDE1C-206ENST00000396193 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
PDE1C-206ENST00000396193 TMF1P82094 1093 aa22.86■■□□□ 1.25
PDE1C-206ENST00000396193 CDK11BP21127 795 aaKnown RBP22.86■■□□□ 1.25
PDE1C-206ENST00000396193 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
PDE1C-206ENST00000396193 HSCBQ8IWL3 235 aa22.85■■□□□ 1.25
PDE1C-206ENST00000396193 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
PDE1C-206ENST00000396193 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
PDE1C-206ENST00000396193 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
PDE1C-206ENST00000396193 FANCIQ9NVI1 1328 aa22.83■■□□□ 1.25
PDE1C-206ENST00000396193 USP35Q9P2H5 1018 aa22.83■■□□□ 1.25
PDE1C-206ENST00000396193 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
PDE1C-206ENST00000396193 FOXD1Q16676 465 aa22.8■■□□□ 1.24
PDE1C-206ENST00000396193 CHMP4BQ9H444 224 aaKnown RBP22.79■■□□□ 1.24
PDE1C-206ENST00000396193 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
PDE1C-206ENST00000396193 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
PDE1C-206ENST00000396193 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
PDE1C-206ENST00000396193 KTN1Q86UP2 1357 aaKnown RBP22.78■■□□□ 1.24
PDE1C-206ENST00000396193 CUX2O14529 1486 aa22.78■■□□□ 1.24
PDE1C-206ENST00000396193 RALBP1Q15311 655 aa22.77■■□□□ 1.24
PDE1C-206ENST00000396193 PLCB2Q00722 1185 aa22.76■■□□□ 1.23
PDE1C-206ENST00000396193 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
PDE1C-206ENST00000396193 SLKQ9H2G2 1235 aaPredicted RBP22.74■■□□□ 1.23
PDE1C-206ENST00000396193 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms