RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 KDM6BO15054 1643 aa25.52■■□□□ 1.68
VCPKMT-201ENST00000395859 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
VCPKMT-201ENST00000395859 JPH4Q96JJ6 628 aa25.48■■□□□ 1.67
VCPKMT-201ENST00000395859 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
VCPKMT-201ENST00000395859 ADCY10Q96PN6 1610 aa25.45■■□□□ 1.67
VCPKMT-201ENST00000395859 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
VCPKMT-201ENST00000395859 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
VCPKMT-201ENST00000395859 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
VCPKMT-201ENST00000395859 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
VCPKMT-201ENST00000395859 TSPOAP1O95153 1857 aa25.34■■□□□ 1.65
VCPKMT-201ENST00000395859 ADGRL1O94910 1474 aa25.28■■□□□ 1.64
VCPKMT-201ENST00000395859 PPRC1Q5VV67 1664 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-201ENST00000395859 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
VCPKMT-201ENST00000395859 GLI2P10070 1586 aa25.16■■□□□ 1.62
VCPKMT-201ENST00000395859 KIAA0586Q9BVV6 1533 aa25.15■■□□□ 1.62
VCPKMT-201ENST00000395859 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
VCPKMT-201ENST00000395859 ABCC2Q92887 1545 aa25.08■■□□□ 1.61
VCPKMT-201ENST00000395859 ASXL2Q76L83 1435 aa25.05■■□□□ 1.6
VCPKMT-201ENST00000395859 PLB1Q6P1J6 1458 aa25.05■■□□□ 1.6
VCPKMT-201ENST00000395859 PTPRGP23470 1445 aa25.03■■□□□ 1.6
VCPKMT-201ENST00000395859 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
VCPKMT-201ENST00000395859 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
VCPKMT-201ENST00000395859 IGF1RP08069 1367 aa24.96■■□□□ 1.59
VCPKMT-201ENST00000395859 FBXO41Q8TF61 875 aa24.96■■□□□ 1.59
VCPKMT-201ENST00000395859 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
VCPKMT-201ENST00000395859 EPRSP07814 1512 aaKnown RBP24.93■■□□□ 1.58
VCPKMT-201ENST00000395859 CUL7Q14999 1698 aa24.91■■□□□ 1.58
VCPKMT-201ENST00000395859 TEX14Q8IWB6 1497 aa24.88■■□□□ 1.57
VCPKMT-201ENST00000395859 KDM5BQ9UGL1 1544 aa24.86■■□□□ 1.57
VCPKMT-201ENST00000395859 UACAQ9BZF9 1416 aa24.85■■□□□ 1.57
VCPKMT-201ENST00000395859 CARMIL2Q6F5E8 1435 aa24.84■■□□□ 1.57
VCPKMT-201ENST00000395859 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
VCPKMT-201ENST00000395859 DISP1Q96F81 1524 aa24.77■■□□□ 1.56
VCPKMT-201ENST00000395859 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
VCPKMT-201ENST00000395859 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
VCPKMT-201ENST00000395859 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
VCPKMT-201ENST00000395859 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
VCPKMT-201ENST00000395859 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
VCPKMT-201ENST00000395859 MAGI3Q5TCQ9 1506 aa24.68■■□□□ 1.54
VCPKMT-201ENST00000395859 WDR7Q9Y4E6 1490 aa24.67■■□□□ 1.54
VCPKMT-201ENST00000395859 KIF21BO75037 1637 aa24.63■■□□□ 1.53
VCPKMT-201ENST00000395859 UGGT2Q9NYU1 1516 aa24.62■■□□□ 1.53
VCPKMT-201ENST00000395859 CFAP43Q8NDM7 1665 aa24.59■■□□□ 1.53
VCPKMT-201ENST00000395859 CD109Q6YHK3 1445 aa24.59■■□□□ 1.53
VCPKMT-201ENST00000395859 PTPRMP28827 1452 aa24.58■■□□□ 1.52
VCPKMT-201ENST00000395859 ADAMTSL3P82987 1691 aa24.57■■□□□ 1.52
VCPKMT-201ENST00000395859 KIAA0556O60303 1618 aa24.56■■□□□ 1.52
VCPKMT-201ENST00000395859 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.52
VCPKMT-201ENST00000395859 LMTK3Q96Q04 1460 aa24.51■■□□□ 1.51
VCPKMT-201ENST00000395859 PCF11O94913 1555 aaKnown RBP24.48■■□□□ 1.51
VCPKMT-201ENST00000395859 ABCA8O94911 1581 aa24.43■■□□□ 1.5
VCPKMT-201ENST00000395859 KCNH8Q96L42 1107 aa24.39■■□□□ 1.49
VCPKMT-201ENST00000395859 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
VCPKMT-201ENST00000395859 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
VCPKMT-201ENST00000395859 MADDQ8WXG6 1647 aa24.36■■□□□ 1.49
VCPKMT-201ENST00000395859 PHLDB1Q86UU1 1377 aa24.33■■□□□ 1.49
VCPKMT-201ENST00000395859 ILDR2Q71H61 639 aa24.33■■□□□ 1.49
VCPKMT-201ENST00000395859 SOCS7O14512 581 aa24.31■■□□□ 1.48
VCPKMT-201ENST00000395859 FRMPD1Q5SYB0 1578 aa24.28■■□□□ 1.48
VCPKMT-201ENST00000395859 ABCA9Q8IUA7 1624 aa24.28■■□□□ 1.48
VCPKMT-201ENST00000395859 CERKQ8TCT0 537 aa24.27■■□□□ 1.48
VCPKMT-201ENST00000395859 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
VCPKMT-201ENST00000395859 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
VCPKMT-201ENST00000395859 NEO1Q92859 1461 aa24.23■■□□□ 1.47
VCPKMT-201ENST00000395859 HSPA2P54652 639 aa24.22■■□□□ 1.47
VCPKMT-201ENST00000395859 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
VCPKMT-201ENST00000395859 ATP10BO94823 1461 aa24.2■■□□□ 1.47
VCPKMT-201ENST00000395859 RIMS1Q86UR5 1692 aaKnown RBP24.2■■□□□ 1.46
VCPKMT-201ENST00000395859 DISP3Q9P2K9 1392 aa24.17■■□□□ 1.46
VCPKMT-201ENST00000395859 ARHGEF40Q8TER5 1519 aa24.15■■□□□ 1.46
VCPKMT-201ENST00000395859 ARID4BQ4LE39 1312 aaPredicted RBP24.12■■□□□ 1.45
VCPKMT-201ENST00000395859 SIGLEC1Q9BZZ2 1709 aa24.07■■□□□ 1.44
VCPKMT-201ENST00000395859 RICTORQ6R327 1708 aa24.07■■□□□ 1.44
VCPKMT-201ENST00000395859 FHOD3Q2V2M9 1422 aa24.04■■□□□ 1.44
VCPKMT-201ENST00000395859 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
VCPKMT-201ENST00000395859 DENND4BO75064 1496 aaPredicted RBP24■■□□□ 1.43
VCPKMT-201ENST00000395859 ZMYM4Q5VZL5 1548 aa24■■□□□ 1.43
VCPKMT-201ENST00000395859 TTC37Q6PGP7 1564 aa24■■□□□ 1.43
VCPKMT-201ENST00000395859 FANCAO15360 1455 aa24■■□□□ 1.43
VCPKMT-201ENST00000395859 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
VCPKMT-201ENST00000395859 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
VCPKMT-201ENST00000395859 POGZQ7Z3K3 1410 aa23.98■■□□□ 1.43
VCPKMT-201ENST00000395859 AKNAQ7Z591 1439 aa23.96■■□□□ 1.43
VCPKMT-201ENST00000395859 YEATS2Q9ULM3 1422 aa23.95■■□□□ 1.42
VCPKMT-201ENST00000395859 STRCQ7RTU9 1775 aa23.94■■□□□ 1.42
VCPKMT-201ENST00000395859 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
VCPKMT-201ENST00000395859 FER1L4A9Z1Z3 1794 aa23.92■■□□□ 1.42
VCPKMT-201ENST00000395859 ZFYVE16Q7Z3T8 1539 aa23.91■■□□□ 1.42
VCPKMT-201ENST00000395859 PREX1Q8TCU6 1659 aa23.9■■□□□ 1.42
VCPKMT-201ENST00000395859 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
VCPKMT-201ENST00000395859 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
VCPKMT-201ENST00000395859 SAMD9Q5K651 1589 aa23.9■■□□□ 1.42
VCPKMT-201ENST00000395859 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.42
VCPKMT-201ENST00000395859 ARHGEF12Q9NZN5 1544 aa23.89■■□□□ 1.42
VCPKMT-201ENST00000395859 NUP153P49790 1475 aaKnown RBP23.89■■□□□ 1.42
VCPKMT-201ENST00000395859 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
VCPKMT-201ENST00000395859 CFAP74Q9C0B2 1584 aa23.86■■□□□ 1.41
VCPKMT-201ENST00000395859 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
VCPKMT-201ENST00000395859 HECW1Q76N89 1606 aa23.84■■□□□ 1.41
VCPKMT-201ENST00000395859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms