RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 ARID3AQ99856 593 aa10.51□□□□□ -0.73
TRPS1-203ENST00000395715 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.5□□□□□ -0.73
TRPS1-203ENST00000395715 SALL2Q9Y467 1007 aaPredicted RBP10.5□□□□□ -0.73
TRPS1-203ENST00000395715 FAM9BQ8IZU0 186 aa10.49□□□□□ -0.73
TRPS1-203ENST00000395715 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
TRPS1-203ENST00000395715 NOC3LQ8WTT2 800 aaKnown RBP10.48□□□□□ -0.73
TRPS1-203ENST00000395715 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
TRPS1-203ENST00000395715 CASC1Q6TDU7 716 aa10.46□□□□□ -0.73
TRPS1-203ENST00000395715 GOLGA6L1Q8N7Z2 621 aa10.46□□□□□ -0.74
TRPS1-203ENST00000395715 DRC7Q8IY82 874 aa10.45□□□□□ -0.74
TRPS1-203ENST00000395715 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
TRPS1-203ENST00000395715 A0A0U1RQG5 324 aaPredicted RBP10.43□□□□□ -0.74
TRPS1-203ENST00000395715 APPP05067 770 aa10.43□□□□□ -0.74
TRPS1-203ENST00000395715 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
TRPS1-203ENST00000395715 ARID3CA6NKF2 412 aa10.42□□□□□ -0.74
TRPS1-203ENST00000395715 KIAA2012Q0VF49 1180 aa10.41□□□□□ -0.74
TRPS1-203ENST00000395715 IRX6P78412 446 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-203ENST00000395715 DEKP35659 375 aaKnown RBP10.41□□□□□ -0.74
TRPS1-203ENST00000395715 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
TRPS1-203ENST00000395715 TMC1Q8TDI8 760 aa10.4□□□□□ -0.74
TRPS1-203ENST00000395715 CHGAP10645 457 aaKnown RBP10.4□□□□□ -0.75
TRPS1-203ENST00000395715 PRM3Q9NNZ6 103 aa10.39□□□□□ -0.75
TRPS1-203ENST00000395715 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
TRPS1-203ENST00000395715 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRPS1-203ENST00000395715 USP35Q9P2H5 1018 aa10.38□□□□□ -0.75
TRPS1-203ENST00000395715 CLSTN1O94985 981 aa10.38□□□□□ -0.75
TRPS1-203ENST00000395715 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
TRPS1-203ENST00000395715 HSP90AA2PQ14568 343 aaPredicted RBP10.37□□□□□ -0.75
TRPS1-203ENST00000395715 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
TRPS1-203ENST00000395715 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
TRPS1-203ENST00000395715 GOLGA6L4A6NEF3 574 aa10.35□□□□□ -0.75
TRPS1-203ENST00000395715 ZNF777Q9ULD5 760 aaPredicted RBP10.35□□□□□ -0.75
TRPS1-203ENST00000395715 VSIG10Q8N0Z9 540 aa10.34□□□□□ -0.75
TRPS1-203ENST00000395715 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRPS1-203ENST00000395715 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
TRPS1-203ENST00000395715 DDX10Q13206 875 aaKnown RBP10.3□□□□□ -0.76
TRPS1-203ENST00000395715 FGD1P98174 961 aa10.29□□□□□ -0.76
TRPS1-203ENST00000395715 P3H3Q8IVL6 736 aa10.28□□□□□ -0.76
TRPS1-203ENST00000395715 TAF7LQ5H9L4 462 aa10.27□□□□□ -0.76
TRPS1-203ENST00000395715 RRP12Q5JTH9 1297 aaKnown RBP10.27□□□□□ -0.77
TRPS1-203ENST00000395715 NAP1L2Q9ULW6 460 aaPredicted RBP10.27□□□□□ -0.77
TRPS1-203ENST00000395715 ZNF771Q7L3S4 317 aaPredicted RBP10.27□□□□□ -0.77
TRPS1-203ENST00000395715 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
TRPS1-203ENST00000395715 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
TRPS1-203ENST00000395715 HSCBQ8IWL3 235 aa10.26□□□□□ -0.77
TRPS1-203ENST00000395715 NPM1P06748 294 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRPS1-203ENST00000395715 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
TRPS1-203ENST00000395715 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
TRPS1-203ENST00000395715 SENP3Q9H4L4 574 aaPredicted RBP10.24□□□□□ -0.77
TRPS1-203ENST00000395715 FTSJ3Q8IY81 847 aaKnown RBP10.24□□□□□ -0.77
TRPS1-203ENST00000395715 STK11IPQ8N1F8 1099 aa10.24□□□□□ -0.77
TRPS1-203ENST00000395715 KCNJ4P48050 445 aa10.22□□□□□ -0.77
TRPS1-203ENST00000395715 PDE4CQ08493 712 aa10.22□□□□□ -0.77
TRPS1-203ENST00000395715 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
TRPS1-203ENST00000395715 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.77
TRPS1-203ENST00000395715 GOLGA6L3A6NEY3 463 aa10.21□□□□□ -0.77
TRPS1-203ENST00000395715 TPM4P67936 248 aa10.21□□□□□ -0.78
TRPS1-203ENST00000395715 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
TRPS1-203ENST00000395715 GPS2Q13227 327 aa10.19□□□□□ -0.78
TRPS1-203ENST00000395715 GNL2Q13823 731 aaKnown RBP10.19□□□□□ -0.78
TRPS1-203ENST00000395715 MEX3CQ5U5Q3 659 aaKnown RBP10.19□□□□□ -0.78
TRPS1-203ENST00000395715 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
TRPS1-203ENST00000395715 GZF1Q9H116 711 aaPredicted RBP10.19□□□□□ -0.78
TRPS1-203ENST00000395715 RGS3P49796 1198 aa10.18□□□□□ -0.78
TRPS1-203ENST00000395715 SYAP1Q96A49 352 aaPredicted RBP10.18□□□□□ -0.78
TRPS1-203ENST00000395715 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
TRPS1-203ENST00000395715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRPS1-203ENST00000395715 GBP4Q96PP9 640 aa10.17□□□□□ -0.78
TRPS1-203ENST00000395715 HTATSF1O43719 755 aaKnown RBP10.17□□□□□ -0.78
TRPS1-203ENST00000395715 TEX35Q5T0J7 233 aa10.17□□□□□ -0.78
TRPS1-203ENST00000395715 ABCC9O60706 1549 aa10.16□□□□□ -0.78
TRPS1-203ENST00000395715 MCCP23508 829 aa10.16□□□□□ -0.78
TRPS1-203ENST00000395715 NPHP1O15259 732 aa10.16□□□□□ -0.78
TRPS1-203ENST00000395715 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
TRPS1-203ENST00000395715 MAP7D2Q96T17 732 aa10.16□□□□□ -0.78
TRPS1-203ENST00000395715 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.79
TRPS1-203ENST00000395715 TPM3P06753 285 aa10.14□□□□□ -0.79
TRPS1-203ENST00000395715 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
TRPS1-203ENST00000395715 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
TRPS1-203ENST00000395715 HMMRO75330 724 aa10.12□□□□□ -0.79
TRPS1-203ENST00000395715 PKNOX2Q96KN3 472 aa10.12□□□□□ -0.79
TRPS1-203ENST00000395715 PPP4R2Q9NY27 417 aa10.12□□□□□ -0.79
TRPS1-203ENST00000395715 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
TRPS1-203ENST00000395715 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
TRPS1-203ENST00000395715 MIER1Q8N108 512 aa10.11□□□□□ -0.79
TRPS1-203ENST00000395715 CHMP4BQ9H444 224 aaKnown RBP10.11□□□□□ -0.79
TRPS1-203ENST00000395715 CCDC191Q8NCU4 936 aa10.1□□□□□ -0.79
TRPS1-203ENST00000395715 CCAR2Q8N163 923 aaKnown RBP10.09□□□□□ -0.79
TRPS1-203ENST00000395715 HSP90B1P14625 803 aaKnown RBP10.09□□□□□ -0.79
TRPS1-203ENST00000395715 CFAP44Q96MT7 982 aa10.09□□□□□ -0.79
TRPS1-203ENST00000395715 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
TRPS1-203ENST00000395715 CALD1Q05682 793 aaKnown RBP10.08□□□□□ -0.8
TRPS1-203ENST00000395715 CCDC34Q96HJ3 373 aa10.08□□□□□ -0.8
TRPS1-203ENST00000395715 PHF14O94880 888 aa10.08□□□□□ -0.8
TRPS1-203ENST00000395715 CREBRFQ8IUR6 639 aa10.07□□□□□ -0.8
TRPS1-203ENST00000395715 NEFHP12036 1026 aa10.07□□□□□ -0.8
TRPS1-203ENST00000395715 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
TRPS1-203ENST00000395715 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
TRPS1-203ENST00000395715 ISY1Q9ULR0 285 aaKnown RBP10.07□□□□□ -0.8
TRPS1-203ENST00000395715 PLCD4Q9BRC7 762 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms