RNA–Protein interactions for RNA: ENST00000395002.6

FAM13A-202, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM13A, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-202ENST00000395002 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
FAM13A-202ENST00000395002 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
FAM13A-202ENST00000395002 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
FAM13A-202ENST00000395002 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
FAM13A-202ENST00000395002 ANP32CO43423 234 aa11.82□□□□□ -0.52
FAM13A-202ENST00000395002 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
FAM13A-202ENST00000395002 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
FAM13A-202ENST00000395002 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
FAM13A-202ENST00000395002 SENP3Q9H4L4 574 aaPredicted RBP11.81□□□□□ -0.52
FAM13A-202ENST00000395002 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
FAM13A-202ENST00000395002 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
FAM13A-202ENST00000395002 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
FAM13A-202ENST00000395002 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
FAM13A-202ENST00000395002 HRCP23327 699 aa11.8□□□□□ -0.52
FAM13A-202ENST00000395002 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
FAM13A-202ENST00000395002 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
FAM13A-202ENST00000395002 ZBTB7CA1YPR0 619 aa11.78□□□□□ -0.52
FAM13A-202ENST00000395002 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
FAM13A-202ENST00000395002 KANK1Q14678 1352 aa11.78□□□□□ -0.52
FAM13A-202ENST00000395002 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.53
FAM13A-202ENST00000395002 FHAD1B1AJZ9 1412 aa11.76□□□□□ -0.53
FAM13A-202ENST00000395002 GGT6Q6P531 493 aa11.75□□□□□ -0.53
FAM13A-202ENST00000395002 CANXP27824 592 aaKnown RBP11.75□□□□□ -0.53
FAM13A-202ENST00000395002 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
FAM13A-202ENST00000395002 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
FAM13A-202ENST00000395002 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
FAM13A-202ENST00000395002 POGKQ9P215 609 aa11.72□□□□□ -0.53
FAM13A-202ENST00000395002 MYT1Q01538 1121 aa11.71□□□□□ -0.53
FAM13A-202ENST00000395002 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
FAM13A-202ENST00000395002 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
FAM13A-202ENST00000395002 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
FAM13A-202ENST00000395002 PTPRGP23470 1445 aa11.66□□□□□ -0.54
FAM13A-202ENST00000395002 CDCA8Q53HL2 280 aa11.66□□□□□ -0.54
FAM13A-202ENST00000395002 NCAPD3P42695 1498 aa11.66□□□□□ -0.54
FAM13A-202ENST00000395002 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
FAM13A-202ENST00000395002 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
FAM13A-202ENST00000395002 EID1Q9Y6B2 187 aa11.64□□□□□ -0.55
FAM13A-202ENST00000395002 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
FAM13A-202ENST00000395002 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
FAM13A-202ENST00000395002 SMARCA4P51532 1647 aa11.62□□□□□ -0.55
FAM13A-202ENST00000395002 FMN1Q68DA7 1419 aa11.62□□□□□ -0.55
FAM13A-202ENST00000395002 RSPH4AQ5TD94 716 aa11.61□□□□□ -0.55
FAM13A-202ENST00000395002 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
FAM13A-202ENST00000395002 KIF3BO15066 747 aa11.59□□□□□ -0.55
FAM13A-202ENST00000395002 WDR43Q15061 677 aaKnown RBP eCLIP11.58□□□□□ -0.56
FAM13A-202ENST00000395002 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
FAM13A-202ENST00000395002 DNAJC5BQ9UF47 199 aa11.56□□□□□ -0.56
FAM13A-202ENST00000395002 RAPGEF2Q9Y4G8 1499 aa11.56□□□□□ -0.56
FAM13A-202ENST00000395002 CFAP53Q96M91 514 aa11.55□□□□□ -0.56
FAM13A-202ENST00000395002 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
FAM13A-202ENST00000395002 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
FAM13A-202ENST00000395002 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
FAM13A-202ENST00000395002 ARXQ96QS3 562 aa11.54□□□□□ -0.56
FAM13A-202ENST00000395002 WIZO95785 1651 aa11.53□□□□□ -0.56
FAM13A-202ENST00000395002 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
FAM13A-202ENST00000395002 NPHP1O15259 732 aa11.52□□□□□ -0.57
FAM13A-202ENST00000395002 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.57
FAM13A-202ENST00000395002 CC2D2AQ9P2K1 1620 aa11.5□□□□□ -0.57
FAM13A-202ENST00000395002 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
FAM13A-202ENST00000395002 ANKRD30AQ9BXX3 1397 aa11.5□□□□□ -0.57
FAM13A-202ENST00000395002 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
FAM13A-202ENST00000395002 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
FAM13A-202ENST00000395002 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
FAM13A-202ENST00000395002 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
FAM13A-202ENST00000395002 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.579e-7■■■■□ 21.5
FAM13A-202ENST00000395002 CCDC18Q5T9S5 1454 aa11.47□□□□□ -0.57
FAM13A-202ENST00000395002 STK26Q9P289 416 aa11.47□□□□□ -0.57
FAM13A-202ENST00000395002 NUDCQ9Y266 331 aa11.47□□□□□ -0.57
FAM13A-202ENST00000395002 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.58
FAM13A-202ENST00000395002 GRIN2BQ13224 1484 aa11.45□□□□□ -0.58
FAM13A-202ENST00000395002 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
FAM13A-202ENST00000395002 ARHGAP35Q9NRY4 1499 aa11.45□□□□□ -0.58
FAM13A-202ENST00000395002 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
FAM13A-202ENST00000395002 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
FAM13A-202ENST00000395002 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
FAM13A-202ENST00000395002 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
FAM13A-202ENST00000395002 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
FAM13A-202ENST00000395002 PKD2Q13563 968 aa11.43□□□□□ -0.58
FAM13A-202ENST00000395002 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
FAM13A-202ENST00000395002 NUP155O75694 1391 aa11.43□□□□□ -0.58
FAM13A-202ENST00000395002 RAD54L2Q9Y4B4 1467 aa11.43□□□□□ -0.58
FAM13A-202ENST00000395002 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
FAM13A-202ENST00000395002 SOX12O15370 315 aa11.41□□□□□ -0.58
FAM13A-202ENST00000395002 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
FAM13A-202ENST00000395002 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
FAM13A-202ENST00000395002 HDGFL2Q7Z4V5 671 aaPredicted RBP11.41□□□□□ -0.58
FAM13A-202ENST00000395002 NESP48681 1621 aa11.4□□□□□ -0.58
FAM13A-202ENST00000395002 MAPK8IP3Q9UPT6 1336 aa11.4□□□□□ -0.58
FAM13A-202ENST00000395002 TMF1P82094 1093 aa11.39□□□□□ -0.59
FAM13A-202ENST00000395002 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
FAM13A-202ENST00000395002 MRS2Q9HD23 443 aa11.38□□□□□ -0.59
FAM13A-202ENST00000395002 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
FAM13A-202ENST00000395002 PNNQ9H307 717 aaKnown RBP11.37□□□□□ -0.59
FAM13A-202ENST00000395002 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
FAM13A-202ENST00000395002 CFTRP13569 1480 aa11.37□□□□□ -0.59
FAM13A-202ENST00000395002 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
FAM13A-202ENST00000395002 IGF1RP08069 1367 aa11.36□□□□□ -0.59
FAM13A-202ENST00000395002 MEX3CQ5U5Q3 659 aaKnown RBP11.35□□□□□ -0.59
FAM13A-202ENST00000395002 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
FAM13A-202ENST00000395002 HNRNPUQ00839 825 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms