RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 ARHGAP35Q9NRY4 1499 aa26.74■■□□□ 1.87
SLC6A4-202ENST00000394821 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
SLC6A4-202ENST00000394821 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
SLC6A4-202ENST00000394821 FBLN2P98095 1184 aa26.71■■□□□ 1.87
SLC6A4-202ENST00000394821 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
SLC6A4-202ENST00000394821 P3H3Q8IVL6 736 aa26.68■■□□□ 1.86
SLC6A4-202ENST00000394821 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
SLC6A4-202ENST00000394821 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
SLC6A4-202ENST00000394821 VPS8Q8N3P4 1428 aa26.63■■□□□ 1.85
SLC6A4-202ENST00000394821 HRCP23327 699 aa26.58■■□□□ 1.85
SLC6A4-202ENST00000394821 CEP170Q5SW79 1584 aa26.57■■□□□ 1.84
SLC6A4-202ENST00000394821 TTBK1Q5TCY1 1321 aaPredicted RBP26.56■■□□□ 1.84
SLC6A4-202ENST00000394821 FHOD3Q2V2M9 1422 aa26.55■■□□□ 1.84
SLC6A4-202ENST00000394821 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
SLC6A4-202ENST00000394821 CHD1O14646 1710 aa26.51■■□□□ 1.83
SLC6A4-202ENST00000394821 KIAA0586Q9BVV6 1533 aa26.49■■□□□ 1.83
SLC6A4-202ENST00000394821 SAMD9Q5K651 1589 aa26.48■■□□□ 1.83
SLC6A4-202ENST00000394821 EFCAB5A4FU69 1503 aa26.48■■□□□ 1.83
SLC6A4-202ENST00000394821 NUP160Q12769 1436 aa26.47■■□□□ 1.83
SLC6A4-202ENST00000394821 UGGT2Q9NYU1 1516 aa26.39■■□□□ 1.82
SLC6A4-202ENST00000394821 DISP1Q96F81 1524 aa26.35■■□□□ 1.81
SLC6A4-202ENST00000394821 PCF11O94913 1555 aaKnown RBP26.35■■□□□ 1.81
SLC6A4-202ENST00000394821 APLP2Q06481 763 aa26.33■■□□□ 1.81
SLC6A4-202ENST00000394821 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
SLC6A4-202ENST00000394821 ATP1B4Q9UN42 357 aaPredicted RBP26.33■■□□□ 1.81
SLC6A4-202ENST00000394821 KANK4Q5T7N3 995 aaPredicted RBP26.31■■□□□ 1.8
SLC6A4-202ENST00000394821 KIAA0556O60303 1618 aa26.3■■□□□ 1.8
SLC6A4-202ENST00000394821 FMN1Q68DA7 1419 aa26.26■■□□□ 1.79
SLC6A4-202ENST00000394821 CASKIN1Q8WXD9 1431 aa26.24■■□□□ 1.79
SLC6A4-202ENST00000394821 FYCO1Q9BQS8 1478 aa26.2■■□□□ 1.79
SLC6A4-202ENST00000394821 LRRIQ1Q96JM4 1722 aa26.2■■□□□ 1.78
SLC6A4-202ENST00000394821 TIAM1Q13009 1591 aa26.19■■□□□ 1.78
SLC6A4-202ENST00000394821 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
SLC6A4-202ENST00000394821 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
SLC6A4-202ENST00000394821 ARID3CA6NKF2 412 aa26.13■■□□□ 1.77
SLC6A4-202ENST00000394821 ERCC6L2Q5T890 1561 aa26.13■■□□□ 1.77
SLC6A4-202ENST00000394821 CARMIL2Q6F5E8 1435 aa26.13■■□□□ 1.77
SLC6A4-202ENST00000394821 SHROOM2Q13796 1616 aa26.12■■□□□ 1.77
SLC6A4-202ENST00000394821 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
SLC6A4-202ENST00000394821 MAP3K1Q13233 1512 aa26.09■■□□□ 1.77
SLC6A4-202ENST00000394821 LRRC9Q6ZRR7 1453 aa26.07■■□□□ 1.76
SLC6A4-202ENST00000394821 PLB1Q6P1J6 1458 aa26.06■■□□□ 1.76
SLC6A4-202ENST00000394821 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
SLC6A4-202ENST00000394821 HECW1Q76N89 1606 aa26.02■■□□□ 1.76
SLC6A4-202ENST00000394821 RAPGEF6Q8TEU7 1601 aa26.02■■□□□ 1.76
SLC6A4-202ENST00000394821 EPRSP07814 1512 aaKnown RBP26■■□□□ 1.75
SLC6A4-202ENST00000394821 NUP153P49790 1475 aaKnown RBP25.99■■□□□ 1.75
SLC6A4-202ENST00000394821 MAGI3Q5TCQ9 1506 aa25.97■■□□□ 1.75
SLC6A4-202ENST00000394821 OSCARQ8IYS5 282 aa25.97■■□□□ 1.75
SLC6A4-202ENST00000394821 PTPRGP23470 1445 aa25.96■■□□□ 1.75
SLC6A4-202ENST00000394821 ABCA8O94911 1581 aa25.92■■□□□ 1.74
SLC6A4-202ENST00000394821 CCDC18Q5T9S5 1454 aa25.92■■□□□ 1.74
SLC6A4-202ENST00000394821 MTUS2Q5JR59 1369 aa25.91■■□□□ 1.74
SLC6A4-202ENST00000394821 PHLDB1Q86UU1 1377 aa25.9■■□□□ 1.74
SLC6A4-202ENST00000394821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
SLC6A4-202ENST00000394821 HNRNPUL2Q1KMD3 747 aaKnown RBP25.88■■□□□ 1.73
SLC6A4-202ENST00000394821 ZEB1P37275 1124 aaPredicted RBP25.86■■□□□ 1.73
SLC6A4-202ENST00000394821 EHBP1L1Q8N3D4 1523 aa25.81■■□□□ 1.72
SLC6A4-202ENST00000394821 RRBP1Q9P2E9 1410 aaKnown RBP25.81■■□□□ 1.72
SLC6A4-202ENST00000394821 ATP10BO94823 1461 aa25.8■■□□□ 1.72
SLC6A4-202ENST00000394821 UACAQ9BZF9 1416 aa25.79■■□□□ 1.72
SLC6A4-202ENST00000394821 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
SLC6A4-202ENST00000394821 SUPT6HQ7KZ85 1726 aaKnown RBP25.76■■□□□ 1.71
SLC6A4-202ENST00000394821 CCNB3Q8WWL7 1395 aa25.75■■□□□ 1.71
SLC6A4-202ENST00000394821 ARHGEF11O15085 1522 aa25.71■■□□□ 1.71
SLC6A4-202ENST00000394821 ABCC2Q92887 1545 aa25.71■■□□□ 1.71
SLC6A4-202ENST00000394821 ITGAEP38570 1179 aa25.69■■□□□ 1.7
SLC6A4-202ENST00000394821 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
SLC6A4-202ENST00000394821 CDK11AQ9UQ88 783 aaPredicted RBP25.68■■□□□ 1.7
SLC6A4-202ENST00000394821 FAM50AQ14320 339 aaKnown RBP25.67■■□□□ 1.7
SLC6A4-202ENST00000394821 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
SLC6A4-202ENST00000394821 KIF14Q15058 1648 aa25.66■■□□□ 1.7
SLC6A4-202ENST00000394821 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
SLC6A4-202ENST00000394821 MYOM3Q5VTT5 1437 aa25.64■■□□□ 1.7
SLC6A4-202ENST00000394821 PLEKHD1A6NEE1 506 aa25.63■■□□□ 1.69
SLC6A4-202ENST00000394821 ADCY10Q96PN6 1610 aa25.61■■□□□ 1.69
SLC6A4-202ENST00000394821 UHRF1BP1LA0JNW5 1464 aa25.59■■□□□ 1.69
SLC6A4-202ENST00000394821 ZCCHC11Q5TAX3 1644 aaKnown RBP25.59■■□□□ 1.69
SLC6A4-202ENST00000394821 KDM5BQ9UGL1 1544 aa25.55■■□□□ 1.68
SLC6A4-202ENST00000394821 PTPN23Q9H3S7 1636 aa25.54■■□□□ 1.68
SLC6A4-202ENST00000394821 ZNF644Q9H582 1327 aaPredicted RBP25.5■■□□□ 1.67
SLC6A4-202ENST00000394821 ABCC10Q5T3U5 1492 aa25.49■■□□□ 1.67
SLC6A4-202ENST00000394821 GPATCH8Q9UKJ3 1502 aaKnown RBP25.49■■□□□ 1.67
SLC6A4-202ENST00000394821 KCNH8Q96L42 1107 aa25.48■■□□□ 1.67
SLC6A4-202ENST00000394821 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
SLC6A4-202ENST00000394821 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
SLC6A4-202ENST00000394821 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
SLC6A4-202ENST00000394821 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
SLC6A4-202ENST00000394821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.46■■□□□ 1.67
SLC6A4-202ENST00000394821 CDC42BPAQ5VT25 1732 aa25.45■■□□□ 1.66
SLC6A4-202ENST00000394821 MIA2Q96PC5 1412 aa25.44■■□□□ 1.66
SLC6A4-202ENST00000394821 TCOF1Q13428 1488 aaKnown RBP25.44■■□□□ 1.66
SLC6A4-202ENST00000394821 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
SLC6A4-202ENST00000394821 CFDP1Q9UEE9 299 aaPredicted RBP25.41■■□□□ 1.66
SLC6A4-202ENST00000394821 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
SLC6A4-202ENST00000394821 TTC37Q6PGP7 1564 aa25.41■■□□□ 1.66
SLC6A4-202ENST00000394821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.4■■□□□ 1.66
SLC6A4-202ENST00000394821 ITSN2Q9NZM3 1697 aa25.39■■□□□ 1.66
SLC6A4-202ENST00000394821 CHIC2Q9UKJ5 165 aa25.35■■□□□ 1.65
SLC6A4-202ENST00000394821 CDC42BPBQ9Y5S2 1711 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms