RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.26
UBE2D3-207ENST00000394801 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.25
UBE2D3-207ENST00000394801 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
UBE2D3-207ENST00000394801 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
UBE2D3-207ENST00000394801 LRRC9Q6ZRR7 1453 aa22.87■■□□□ 1.25
UBE2D3-207ENST00000394801 CLSPNQ9HAW4 1339 aa22.86■■□□□ 1.25
UBE2D3-207ENST00000394801 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-207ENST00000394801 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.252e-7■■■■□ 25.1
UBE2D3-207ENST00000394801 PCF11O94913 1555 aaKnown RBP22.83■■□□□ 1.25
UBE2D3-207ENST00000394801 CFAP43Q8NDM7 1665 aa22.83■■□□□ 1.24
UBE2D3-207ENST00000394801 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
UBE2D3-207ENST00000394801 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
UBE2D3-207ENST00000394801 CASKIN1Q8WXD9 1431 aa22.8■■□□□ 1.24
UBE2D3-207ENST00000394801 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
UBE2D3-207ENST00000394801 P3H3Q8IVL6 736 aa22.79■■□□□ 1.24
UBE2D3-207ENST00000394801 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
UBE2D3-207ENST00000394801 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
UBE2D3-207ENST00000394801 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
UBE2D3-207ENST00000394801 FMN1Q68DA7 1419 aa22.75■■□□□ 1.23
UBE2D3-207ENST00000394801 SAMD9Q5K651 1589 aa22.74■■□□□ 1.23
UBE2D3-207ENST00000394801 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
UBE2D3-207ENST00000394801 PHLDB1Q86UU1 1377 aa22.72■■□□□ 1.23
UBE2D3-207ENST00000394801 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
UBE2D3-207ENST00000394801 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
UBE2D3-207ENST00000394801 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
UBE2D3-207ENST00000394801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.211e-10■■■□□ 14.9
UBE2D3-207ENST00000394801 WDR62O43379 1518 aa22.59■■□□□ 1.21
UBE2D3-207ENST00000394801 ITGAEP38570 1179 aa22.59■■□□□ 1.21
UBE2D3-207ENST00000394801 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
UBE2D3-207ENST00000394801 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
UBE2D3-207ENST00000394801 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
UBE2D3-207ENST00000394801 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.21
UBE2D3-207ENST00000394801 IFT140Q96RY7 1462 aa22.58■■□□□ 1.21
UBE2D3-207ENST00000394801 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
UBE2D3-207ENST00000394801 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
UBE2D3-207ENST00000394801 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-207ENST00000394801 IQGAP2Q13576 1575 aa22.52■■□□□ 1.19
UBE2D3-207ENST00000394801 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
UBE2D3-207ENST00000394801 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
UBE2D3-207ENST00000394801 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
UBE2D3-207ENST00000394801 ZNF608Q9ULD9 1512 aaPredicted RBP22.48■■□□□ 1.19
UBE2D3-207ENST00000394801 MAPKBP1O60336 1514 aa22.46■■□□□ 1.19
UBE2D3-207ENST00000394801 UGGT2Q9NYU1 1516 aa22.44■■□□□ 1.18
UBE2D3-207ENST00000394801 CCDC18Q5T9S5 1454 aa22.44■■□□□ 1.18
UBE2D3-207ENST00000394801 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
UBE2D3-207ENST00000394801 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
UBE2D3-207ENST00000394801 SUPT6HQ7KZ85 1726 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-207ENST00000394801 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
UBE2D3-207ENST00000394801 MYOM3Q5VTT5 1437 aa22.39■■□□□ 1.18
UBE2D3-207ENST00000394801 HECW1Q76N89 1606 aa22.39■■□□□ 1.17
UBE2D3-207ENST00000394801 KIAA0586Q9BVV6 1533 aa22.38■■□□□ 1.17
UBE2D3-207ENST00000394801 EIF4G3O43432 1585 aaKnown RBP22.36■■□□□ 1.17
UBE2D3-207ENST00000394801 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
UBE2D3-207ENST00000394801 MAGI3Q5TCQ9 1506 aa22.35■■□□□ 1.17
UBE2D3-207ENST00000394801 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-207ENST00000394801 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-207ENST00000394801 GRIN2AQ12879 1464 aa22.33■■□□□ 1.17
UBE2D3-207ENST00000394801 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
UBE2D3-207ENST00000394801 HFM1A2PYH4 1435 aa22.3■■□□□ 1.16
UBE2D3-207ENST00000394801 CENPBP07199 599 aaPredicted RBP22.3■■□□□ 1.16
UBE2D3-207ENST00000394801 MIER1Q8N108 512 aa22.3■■□□□ 1.16
UBE2D3-207ENST00000394801 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
UBE2D3-207ENST00000394801 DISP1Q96F81 1524 aa22.29■■□□□ 1.16
UBE2D3-207ENST00000394801 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
UBE2D3-207ENST00000394801 TIMELESSQ9UNS1 1208 aa22.28■■□□□ 1.16
UBE2D3-207ENST00000394801 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
UBE2D3-207ENST00000394801 PTPN23Q9H3S7 1636 aa22.27■■□□□ 1.16
UBE2D3-207ENST00000394801 TCOF1Q13428 1488 aaKnown RBP22.27■■□□□ 1.15
UBE2D3-207ENST00000394801 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-207ENST00000394801 NAIPQ13075 1403 aa22.23■■□□□ 1.15
UBE2D3-207ENST00000394801 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
UBE2D3-207ENST00000394801 MIA2Q96PC5 1412 aa22.22■■□□□ 1.15
UBE2D3-207ENST00000394801 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
UBE2D3-207ENST00000394801 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
UBE2D3-207ENST00000394801 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
UBE2D3-207ENST00000394801 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-207ENST00000394801 NUP153P49790 1475 aaKnown RBP22.16■■□□□ 1.14
UBE2D3-207ENST00000394801 RAPGEF6Q8TEU7 1601 aa22.15■■□□□ 1.14
UBE2D3-207ENST00000394801 AKNAQ7Z591 1439 aa22.14■■□□□ 1.14
UBE2D3-207ENST00000394801 NUP160Q12769 1436 aa22.13■■□□□ 1.13
UBE2D3-207ENST00000394801 GCC2Q8IWJ2 1684 aa22.09■■□□□ 1.13
UBE2D3-207ENST00000394801 PPP1R15AO75807 674 aaPredicted RBP22.09■■□□□ 1.13
UBE2D3-207ENST00000394801 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
UBE2D3-207ENST00000394801 ARID3CA6NKF2 412 aa22.05■■□□□ 1.12
UBE2D3-207ENST00000394801 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
UBE2D3-207ENST00000394801 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
UBE2D3-207ENST00000394801 FBLN2P98095 1184 aa22.02■■□□□ 1.11
UBE2D3-207ENST00000394801 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.11
UBE2D3-207ENST00000394801 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.11
UBE2D3-207ENST00000394801 TROQ12816 1431 aaPredicted RBP22.01■■□□□ 1.11
UBE2D3-207ENST00000394801 PLB1Q6P1J6 1458 aa22■■□□□ 1.11
UBE2D3-207ENST00000394801 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
UBE2D3-207ENST00000394801 ROCK1Q13464 1354 aa22■■□□□ 1.11
UBE2D3-207ENST00000394801 GTF3C3Q9Y5Q9 886 aa21.99■■□□□ 1.11
UBE2D3-207ENST00000394801 TONSLQ96HA7 1378 aa21.98■■□□□ 1.11
UBE2D3-207ENST00000394801 DAPK1P53355 1430 aa21.98■■□□□ 1.11
UBE2D3-207ENST00000394801 DNMT1P26358 1616 aaKnown RBP21.97■■□□□ 1.11
UBE2D3-207ENST00000394801 ABCC5O15440 1437 aa21.96■■□□□ 1.11
UBE2D3-207ENST00000394801 DENND4BO75064 1496 aaPredicted RBP21.95■■□□□ 1.11
UBE2D3-207ENST00000394801 PRG4Q92954 1404 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms