RNA–Protein interactions for RNA: ENST00000394072.7

TNS4-202, Transcript of tensin 4, humanhuman

TSL 1 (best)

Gene TNS4, Length 2,174 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS4-202ENST00000394072 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
TNS4-202ENST00000394072 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
TNS4-202ENST00000394072 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
TNS4-202ENST00000394072 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
TNS4-202ENST00000394072 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
TNS4-202ENST00000394072 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
TNS4-202ENST00000394072 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
TNS4-202ENST00000394072 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
TNS4-202ENST00000394072 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.37
TNS4-202ENST00000394072 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
TNS4-202ENST00000394072 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
TNS4-202ENST00000394072 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
TNS4-202ENST00000394072 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
TNS4-202ENST00000394072 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.37
TNS4-202ENST00000394072 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.36
TNS4-202ENST00000394072 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
TNS4-202ENST00000394072 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
TNS4-202ENST00000394072 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
TNS4-202ENST00000394072 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
TNS4-202ENST00000394072 SAMD9Q5K651 1589 aa17.27■□□□□ 0.36
TNS4-202ENST00000394072 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
TNS4-202ENST00000394072 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.35
TNS4-202ENST00000394072 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
TNS4-202ENST00000394072 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
TNS4-202ENST00000394072 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
TNS4-202ENST00000394072 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
TNS4-202ENST00000394072 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
TNS4-202ENST00000394072 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
TNS4-202ENST00000394072 MIER1Q8N108 512 aa17.21■□□□□ 0.34
TNS4-202ENST00000394072 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
TNS4-202ENST00000394072 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
TNS4-202ENST00000394072 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
TNS4-202ENST00000394072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNS4-202ENST00000394072 WDR62O43379 1518 aa17.15■□□□□ 0.34
TNS4-202ENST00000394072 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
TNS4-202ENST00000394072 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
TNS4-202ENST00000394072 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
TNS4-202ENST00000394072 LRRIQ1Q96JM4 1722 aa17.11■□□□□ 0.33
TNS4-202ENST00000394072 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
TNS4-202ENST00000394072 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
TNS4-202ENST00000394072 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
TNS4-202ENST00000394072 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
TNS4-202ENST00000394072 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
TNS4-202ENST00000394072 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
TNS4-202ENST00000394072 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
TNS4-202ENST00000394072 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
TNS4-202ENST00000394072 HECW1Q76N89 1606 aa17.04■□□□□ 0.32
TNS4-202ENST00000394072 UGGT2Q9NYU1 1516 aa17.03■□□□□ 0.32
TNS4-202ENST00000394072 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.31
TNS4-202ENST00000394072 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
TNS4-202ENST00000394072 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
TNS4-202ENST00000394072 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
TNS4-202ENST00000394072 ARHGEF11O15085 1522 aa16.97■□□□□ 0.31
TNS4-202ENST00000394072 MAPKBP1O60336 1514 aa16.97■□□□□ 0.31
TNS4-202ENST00000394072 ITGAEP38570 1179 aa16.96■□□□□ 0.31
TNS4-202ENST00000394072 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
TNS4-202ENST00000394072 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
TNS4-202ENST00000394072 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
TNS4-202ENST00000394072 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
TNS4-202ENST00000394072 MYOM3Q5VTT5 1437 aa16.95■□□□□ 0.3
TNS4-202ENST00000394072 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
TNS4-202ENST00000394072 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
TNS4-202ENST00000394072 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
TNS4-202ENST00000394072 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
TNS4-202ENST00000394072 EPRSP07814 1512 aaKnown RBP16.91■□□□□ 0.3
TNS4-202ENST00000394072 PTPN23Q9H3S7 1636 aa16.91■□□□□ 0.3
TNS4-202ENST00000394072 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
TNS4-202ENST00000394072 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
TNS4-202ENST00000394072 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
TNS4-202ENST00000394072 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
TNS4-202ENST00000394072 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
TNS4-202ENST00000394072 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
TNS4-202ENST00000394072 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
TNS4-202ENST00000394072 GCC2Q8IWJ2 1684 aa16.84■□□□□ 0.29
TNS4-202ENST00000394072 RAPGEF6Q8TEU7 1601 aa16.83■□□□□ 0.29
TNS4-202ENST00000394072 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
TNS4-202ENST00000394072 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
TNS4-202ENST00000394072 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
TNS4-202ENST00000394072 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
TNS4-202ENST00000394072 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
TNS4-202ENST00000394072 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
TNS4-202ENST00000394072 NAIPQ13075 1403 aa16.78■□□□□ 0.28
TNS4-202ENST00000394072 NUP160Q12769 1436 aa16.76■□□□□ 0.27
TNS4-202ENST00000394072 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
TNS4-202ENST00000394072 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
TNS4-202ENST00000394072 ADCY10Q96PN6 1610 aa16.72■□□□□ 0.27
TNS4-202ENST00000394072 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
TNS4-202ENST00000394072 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
TNS4-202ENST00000394072 CDK11AQ9UQ88 783 aaPredicted RBP16.71■□□□□ 0.27
TNS4-202ENST00000394072 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
TNS4-202ENST00000394072 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
TNS4-202ENST00000394072 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
TNS4-202ENST00000394072 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
TNS4-202ENST00000394072 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
TNS4-202ENST00000394072 DAPK1P53355 1430 aa16.63■□□□□ 0.25
TNS4-202ENST00000394072 ABCA8O94911 1581 aa16.62■□□□□ 0.25
TNS4-202ENST00000394072 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
TNS4-202ENST00000394072 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
TNS4-202ENST00000394072 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
TNS4-202ENST00000394072 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms