RNA–Protein interactions for RNA: ENST00000393958.6

PC-202, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-202ENST00000393958 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
PC-202ENST00000393958 TOP2BQ02880 1626 aa14.38□□□□□ -0.11
PC-202ENST00000393958 CUX1P39880 1505 aa14.37□□□□□ -0.11
PC-202ENST00000393958 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
PC-202ENST00000393958 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
PC-202ENST00000393958 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
PC-202ENST00000393958 PLPPR3Q6T4P5 718 aa14.35□□□□□ -0.11
PC-202ENST00000393958 MYT1LQ9UL68 1186 aa14.33□□□□□ -0.12
PC-202ENST00000393958 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
PC-202ENST00000393958 NEFLP07196 543 aa14.32□□□□□ -0.12
PC-202ENST00000393958 KIF27Q86VH2 1401 aa14.31□□□□□ -0.12
PC-202ENST00000393958 CUX2O14529 1486 aa14.31□□□□□ -0.12
PC-202ENST00000393958 IRX6P78412 446 aaPredicted RBP14.3□□□□□ -0.12
PC-202ENST00000393958 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
PC-202ENST00000393958 IGF1RP08069 1367 aa14.26□□□□□ -0.13
PC-202ENST00000393958 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
PC-202ENST00000393958 BIVM-ERCC5R4GMW8 1640 aa14.24□□□□□ -0.13
PC-202ENST00000393958 RAB3GAP2Q9H2M9 1393 aa14.23□□□□□ -0.13
PC-202ENST00000393958 CFTRP13569 1480 aa14.22□□□□□ -0.13
PC-202ENST00000393958 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
PC-202ENST00000393958 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
PC-202ENST00000393958 ANP32CO43423 234 aa14.21□□□□□ -0.13
PC-202ENST00000393958 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.14
PC-202ENST00000393958 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
PC-202ENST00000393958 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
PC-202ENST00000393958 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
PC-202ENST00000393958 ARID3CA6NKF2 412 aa14.2□□□□□ -0.14
PC-202ENST00000393958 RRBP1Q9P2E9 1410 aaKnown RBP14.17□□□□□ -0.14
PC-202ENST00000393958 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
PC-202ENST00000393958 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
PC-202ENST00000393958 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
PC-202ENST00000393958 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
PC-202ENST00000393958 HNRNPUQ00839 825 aaKnown RBP eCLIP14.13□□□□□ -0.15
PC-202ENST00000393958 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
PC-202ENST00000393958 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
PC-202ENST00000393958 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
PC-202ENST00000393958 FHOD3Q2V2M9 1422 aa14.11□□□□□ -0.15
PC-202ENST00000393958 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
PC-202ENST00000393958 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
PC-202ENST00000393958 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
PC-202ENST00000393958 TONSLQ96HA7 1378 aa14.06□□□□□ -0.16
PC-202ENST00000393958 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
PC-202ENST00000393958 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
PC-202ENST00000393958 FAM9BQ8IZU0 186 aa14.04□□□□□ -0.16
PC-202ENST00000393958 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
PC-202ENST00000393958 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
PC-202ENST00000393958 AQRO60306 1485 aaKnown RBP eCLIP14.03□□□□□ -0.163e-6■■■□□ 15.3
PC-202ENST00000393958 WDR97A6NE52 1622 aa14.02□□□□□ -0.17
PC-202ENST00000393958 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
PC-202ENST00000393958 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
PC-202ENST00000393958 TIAM1Q13009 1591 aa14.01□□□□□ -0.17
PC-202ENST00000393958 ARID4BQ4LE39 1312 aaPredicted RBP14□□□□□ -0.17
PC-202ENST00000393958 FOXD1Q16676 465 aa13.98□□□□□ -0.17
PC-202ENST00000393958 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
PC-202ENST00000393958 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
PC-202ENST00000393958 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.18
PC-202ENST00000393958 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
PC-202ENST00000393958 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
PC-202ENST00000393958 B4GALNT3Q6L9W6 998 aa13.93□□□□□ -0.18
PC-202ENST00000393958 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
PC-202ENST00000393958 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
PC-202ENST00000393958 MTUS2Q5JR59 1369 aa13.92□□□□□ -0.18
PC-202ENST00000393958 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
PC-202ENST00000393958 MSH5O43196 834 aa13.9□□□□□ -0.18
PC-202ENST00000393958 CCER2I3L3R5 266 aa13.9□□□□□ -0.18
PC-202ENST00000393958 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
PC-202ENST00000393958 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
PC-202ENST00000393958 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
PC-202ENST00000393958 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
PC-202ENST00000393958 ESF1Q9H501 851 aaKnown RBP13.87□□□□□ -0.19
PC-202ENST00000393958 NBR1Q14596 966 aa13.87□□□□□ -0.19
PC-202ENST00000393958 IFT140Q96RY7 1462 aa13.84□□□□□ -0.19
PC-202ENST00000393958 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.19
PC-202ENST00000393958 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.19
PC-202ENST00000393958 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
PC-202ENST00000393958 ZNF608Q9ULD9 1512 aaPredicted RBP13.83□□□□□ -0.2
PC-202ENST00000393958 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
PC-202ENST00000393958 EIF4G2P78344 907 aaKnown RBP eCLIP13.82□□□□□ -0.2
PC-202ENST00000393958 MAP3K1Q13233 1512 aa13.81□□□□□ -0.2
PC-202ENST00000393958 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
PC-202ENST00000393958 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
PC-202ENST00000393958 CCDC18Q5T9S5 1454 aa13.79□□□□□ -0.2
PC-202ENST00000393958 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
PC-202ENST00000393958 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
PC-202ENST00000393958 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
PC-202ENST00000393958 MLECQ14165 292 aa13.78□□□□□ -0.2
PC-202ENST00000393958 FYCO1Q9BQS8 1478 aa13.78□□□□□ -0.2
PC-202ENST00000393958 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
PC-202ENST00000393958 C11orf95C9JLR9 678 aaPredicted RBP13.77□□□□□ -0.2
PC-202ENST00000393958 ZNF644Q9H582 1327 aaPredicted RBP13.77□□□□□ -0.2
PC-202ENST00000393958 FMN1Q68DA7 1419 aa13.77□□□□□ -0.21
PC-202ENST00000393958 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
PC-202ENST00000393958 NAIPQ13075 1403 aa13.76□□□□□ -0.21
PC-202ENST00000393958 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
PC-202ENST00000393958 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
PC-202ENST00000393958 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
PC-202ENST00000393958 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
PC-202ENST00000393958 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
PC-202ENST00000393958 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
PC-202ENST00000393958 MPHOSPH9Q99550 1183 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms