RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 IGF1RP08069 1367 aa32.63■■■□□ 2.81
SNCB-202ENST00000393693 KIF27Q86VH2 1401 aa32.56■■■□□ 2.8
SNCB-202ENST00000393693 KIF13AQ9H1H9 1805 aa32.56■■■□□ 2.8
SNCB-202ENST00000393693 KIAA0586Q9BVV6 1533 aa32.52■■■□□ 2.8
SNCB-202ENST00000393693 NPM1P06748 294 aaKnown RBP eCLIP32.5■■■□□ 2.79
SNCB-202ENST00000393693 FAM69CQ0P6D2 419 aa32.48■■■□□ 2.79
SNCB-202ENST00000393693 CUL7Q14999 1698 aa32.45■■■□□ 2.79
SNCB-202ENST00000393693 ADCY10Q96PN6 1610 aa32.44■■■□□ 2.78
SNCB-202ENST00000393693 ABCC10Q5T3U5 1492 aa32.44■■■□□ 2.78
SNCB-202ENST00000393693 MAPKBP1O60336 1514 aa32.4■■■□□ 2.78
SNCB-202ENST00000393693 CARMIL1Q5VZK9 1371 aa32.39■■■□□ 2.78
SNCB-202ENST00000393693 TTBK1Q5TCY1 1321 aaPredicted RBP32.34■■■□□ 2.77
SNCB-202ENST00000393693 DIP2BQ9P265 1576 aa32.33■■■□□ 2.77
SNCB-202ENST00000393693 PTPRGP23470 1445 aa32.29■■■□□ 2.76
SNCB-202ENST00000393693 TNIKQ9UKE5 1360 aa32.2■■■□□ 2.75
SNCB-202ENST00000393693 CARMIL2Q6F5E8 1435 aa32.19■■■□□ 2.74
SNCB-202ENST00000393693 IQGAP2Q13576 1575 aa32.16■■■□□ 2.74
SNCB-202ENST00000393693 TSPOAP1O95153 1857 aa32.11■■■□□ 2.73
SNCB-202ENST00000393693 ABCC2Q92887 1545 aa32.1■■■□□ 2.73
SNCB-202ENST00000393693 KDM6BO15054 1643 aa32.09■■■□□ 2.73
SNCB-202ENST00000393693 DISP1Q96F81 1524 aa32.07■■■□□ 2.72
SNCB-202ENST00000393693 RAPGEF2Q9Y4G8 1499 aa32.05■■■□□ 2.72
SNCB-202ENST00000393693 ASXL2Q76L83 1435 aa32.05■■■□□ 2.72
SNCB-202ENST00000393693 UACAQ9BZF9 1416 aa32.03■■■□□ 2.72
SNCB-202ENST00000393693 UHRF1BP1LA0JNW5 1464 aa32.02■■■□□ 2.72
SNCB-202ENST00000393693 PLB1Q6P1J6 1458 aa31.98■■■□□ 2.71
SNCB-202ENST00000393693 UGGT2Q9NYU1 1516 aa31.96■■■□□ 2.71
SNCB-202ENST00000393693 KDM4FA0A1W2PPD8 638 aa31.96■■■□□ 2.71
SNCB-202ENST00000393693 GLI2P10070 1586 aa31.92■■■□□ 2.7
SNCB-202ENST00000393693 KDM5BQ9UGL1 1544 aa31.89■■■□□ 2.7
SNCB-202ENST00000393693 KIAA0556O60303 1618 aa31.89■■■□□ 2.7
SNCB-202ENST00000393693 PPRC1Q5VV67 1664 aaKnown RBP31.89■■■□□ 2.7
SNCB-202ENST00000393693 EPRSP07814 1512 aaKnown RBP31.85■■■□□ 2.69
SNCB-202ENST00000393693 ZCCHC11Q5TAX3 1644 aaKnown RBP31.81■■■□□ 2.68
SNCB-202ENST00000393693 COL17A1Q9UMD9 1497 aaPredicted RBP31.78■■■□□ 2.68
SNCB-202ENST00000393693 MAP3K4Q9Y6R4 1608 aa31.74■■■□□ 2.67
SNCB-202ENST00000393693 CTTNBP2Q8WZ74 1663 aa31.72■■■□□ 2.67
SNCB-202ENST00000393693 PRXQ9BXM0 1461 aa31.68■■■□□ 2.66
SNCB-202ENST00000393693 WDR7Q9Y4E6 1490 aa31.67■■■□□ 2.66
SNCB-202ENST00000393693 GOLGA3Q08378 1498 aa31.66■■■□□ 2.66
SNCB-202ENST00000393693 TEX14Q8IWB6 1497 aa31.65■■■□□ 2.66
SNCB-202ENST00000393693 ABCA8O94911 1581 aa31.62■■■□□ 2.65
SNCB-202ENST00000393693 KCNH8Q96L42 1107 aa31.61■■■□□ 2.65
SNCB-202ENST00000393693 ADGRL1O94910 1474 aa31.59■■■□□ 2.65
SNCB-202ENST00000393693 P3H3Q8IVL6 736 aa31.55■■■□□ 2.64
SNCB-202ENST00000393693 CD109Q6YHK3 1445 aa31.53■■■□□ 2.64
SNCB-202ENST00000393693 ARID3CA6NKF2 412 aa31.52■■■□□ 2.64
SNCB-202ENST00000393693 MAGI3Q5TCQ9 1506 aa31.48■■■□□ 2.63
SNCB-202ENST00000393693 CFAP43Q8NDM7 1665 aa31.44■■■□□ 2.62
SNCB-202ENST00000393693 CSRNP3Q8WYN3 585 aa31.44■■■□□ 2.62
SNCB-202ENST00000393693 ATP10BO94823 1461 aa31.4■■■□□ 2.62
SNCB-202ENST00000393693 FAM9AQ8IZU1 332 aaPredicted RBP31.38■■■□□ 2.61
SNCB-202ENST00000393693 SAMD9Q5K651 1589 aa31.3■■■□□ 2.6
SNCB-202ENST00000393693 RANGAP1P46060 587 aaPredicted RBP31.3■■■□□ 2.6
SNCB-202ENST00000393693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.24■■■□□ 2.59
SNCB-202ENST00000393693 HNRNPUL2Q1KMD3 747 aaKnown RBP31.24■■■□□ 2.59
SNCB-202ENST00000393693 ARAP3Q8WWN8 1544 aa31.24■■■□□ 2.59
SNCB-202ENST00000393693 RAPGEF6Q8TEU7 1601 aa31.23■■■□□ 2.59
SNCB-202ENST00000393693 HECW2Q9P2P5 1572 aa31.21■■■□□ 2.59
SNCB-202ENST00000393693 ABCA9Q8IUA7 1624 aa31.2■■■□□ 2.59
SNCB-202ENST00000393693 KIF21BO75037 1637 aa31.19■■■□□ 2.58
SNCB-202ENST00000393693 FHOD3Q2V2M9 1422 aa31.17■■■□□ 2.58
SNCB-202ENST00000393693 ILDR1Q86SU0 546 aaPredicted RBP31.17■■■□□ 2.58
SNCB-202ENST00000393693 EEA1Q15075 1411 aa31.16■■■□□ 2.58
SNCB-202ENST00000393693 NUP153P49790 1475 aaKnown RBP31.16■■■□□ 2.58
SNCB-202ENST00000393693 RAPGEF3O95398 923 aa31.15■■■□□ 2.58
SNCB-202ENST00000393693 PHLDB1Q86UU1 1377 aa31.12■■■□□ 2.57
SNCB-202ENST00000393693 NEO1Q92859 1461 aa31.07■■■□□ 2.56
SNCB-202ENST00000393693 PLEKHD1A6NEE1 506 aa31.03■■■□□ 2.56
SNCB-202ENST00000393693 FRMPD1Q5SYB0 1578 aa30.98■■■□□ 2.55
SNCB-202ENST00000393693 EHMT2Q96KQ7 1210 aa30.96■■■□□ 2.55
SNCB-202ENST00000393693 ADAMTSL3P82987 1691 aa30.93■■■□□ 2.54
SNCB-202ENST00000393693 EFCAB5A4FU69 1503 aa30.93■■■□□ 2.54
SNCB-202ENST00000393693 PTPRMP28827 1452 aa30.92■■■□□ 2.54
SNCB-202ENST00000393693 ARID4BQ4LE39 1312 aaPredicted RBP30.92■■■□□ 2.54
SNCB-202ENST00000393693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.9■■■□□ 2.54
SNCB-202ENST00000393693 AKNAQ7Z591 1439 aa30.9■■■□□ 2.54
SNCB-202ENST00000393693 DENND4BO75064 1496 aaPredicted RBP30.89■■■□□ 2.53
SNCB-202ENST00000393693 FANCAO15360 1455 aa30.87■■■□□ 2.53
SNCB-202ENST00000393693 CDK13Q14004 1512 aaKnown RBP30.86■■■□□ 2.53
SNCB-202ENST00000393693 TTC37Q6PGP7 1564 aa30.84■■■□□ 2.53
SNCB-202ENST00000393693 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
SNCB-202ENST00000393693 BCORL1Q5H9F3 1711 aa30.84■■■□□ 2.53
SNCB-202ENST00000393693 RICTORQ6R327 1708 aa30.81■■■□□ 2.52
SNCB-202ENST00000393693 MADDQ8WXG6 1647 aa30.8■■■□□ 2.52
SNCB-202ENST00000393693 ATP1B4Q9UN42 357 aaPredicted RBP30.8■■■□□ 2.52
SNCB-202ENST00000393693 ARHGEF40Q8TER5 1519 aa30.79■■■□□ 2.52
SNCB-202ENST00000393693 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.52
SNCB-202ENST00000393693 YEATS2Q9ULM3 1422 aa30.73■■■□□ 2.51
SNCB-202ENST00000393693 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
SNCB-202ENST00000393693 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
SNCB-202ENST00000393693 PLCH2O75038 1416 aa30.71■■■□□ 2.51
SNCB-202ENST00000393693 ZMYM4Q5VZL5 1548 aa30.69■■■□□ 2.5
SNCB-202ENST00000393693 FMN1Q68DA7 1419 aa30.69■■■□□ 2.5
SNCB-202ENST00000393693 ZFYVE16Q7Z3T8 1539 aa30.68■■■□□ 2.5
SNCB-202ENST00000393693 SCAPERQ9BY12 1400 aa30.68■■■□□ 2.5
SNCB-202ENST00000393693 PLPPR3Q6T4P5 718 aa30.68■■■□□ 2.5
SNCB-202ENST00000393693 RIMS1Q86UR5 1692 aaKnown RBP30.68■■■□□ 2.5
SNCB-202ENST00000393693 SIGLEC1Q9BZZ2 1709 aa30.66■■■□□ 2.5
SNCB-202ENST00000393693 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms