RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
PLXNA1-201ENST00000393409 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
PLXNA1-201ENST00000393409 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
PLXNA1-201ENST00000393409 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
PLXNA1-201ENST00000393409 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
PLXNA1-201ENST00000393409 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.33
PLXNA1-201ENST00000393409 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.33
PLXNA1-201ENST00000393409 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
PLXNA1-201ENST00000393409 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
PLXNA1-201ENST00000393409 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
PLXNA1-201ENST00000393409 DNTTIP2Q5QJE6 756 aaKnown RBP17.04■□□□□ 0.32
PLXNA1-201ENST00000393409 L1TD1Q5T7N2 865 aaKnown RBP17.03■□□□□ 0.32
PLXNA1-201ENST00000393409 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
PLXNA1-201ENST00000393409 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
PLXNA1-201ENST00000393409 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
PLXNA1-201ENST00000393409 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
PLXNA1-201ENST00000393409 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
PLXNA1-201ENST00000393409 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
PLXNA1-201ENST00000393409 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
PLXNA1-201ENST00000393409 RTN4Q9NQC3 1192 aaKnown RBP16.94■□□□□ 0.3
PLXNA1-201ENST00000393409 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
PLXNA1-201ENST00000393409 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
PLXNA1-201ENST00000393409 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
PLXNA1-201ENST00000393409 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
PLXNA1-201ENST00000393409 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
PLXNA1-201ENST00000393409 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
PLXNA1-201ENST00000393409 MSNP26038 577 aaKnown RBP16.9■□□□□ 0.3
PLXNA1-201ENST00000393409 RBM19Q9Y4C8 960 aaKnown RBP16.89■□□□□ 0.29
PLXNA1-201ENST00000393409 PTMSP20962 102 aa16.88■□□□□ 0.29
PLXNA1-201ENST00000393409 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
PLXNA1-201ENST00000393409 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
PLXNA1-201ENST00000393409 NRDCO43847 1150 aa16.87■□□□□ 0.29
PLXNA1-201ENST00000393409 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
PLXNA1-201ENST00000393409 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
PLXNA1-201ENST00000393409 MS4A1P11836 297 aa16.85■□□□□ 0.29
PLXNA1-201ENST00000393409 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
PLXNA1-201ENST00000393409 TSPY4P0CV99 314 aa16.84■□□□□ 0.29
PLXNA1-201ENST00000393409 TSPY10P0CW01 314 aa16.84■□□□□ 0.29
PLXNA1-201ENST00000393409 CFAP53Q96M91 514 aa16.83■□□□□ 0.29
PLXNA1-201ENST00000393409 KNSTRNQ9Y448 316 aa16.83■□□□□ 0.28
PLXNA1-201ENST00000393409 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
PLXNA1-201ENST00000393409 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
PLXNA1-201ENST00000393409 CHGAP10645 457 aaKnown RBP16.82■□□□□ 0.28
PLXNA1-201ENST00000393409 HSCBQ8IWL3 235 aa16.81■□□□□ 0.28
PLXNA1-201ENST00000393409 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
PLXNA1-201ENST00000393409 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
PLXNA1-201ENST00000393409 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
PLXNA1-201ENST00000393409 RGS3P49796 1198 aa16.75■□□□□ 0.27
PLXNA1-201ENST00000393409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■■■□ 20.1
PLXNA1-201ENST00000393409 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
PLXNA1-201ENST00000393409 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
PLXNA1-201ENST00000393409 GBP4Q96PP9 640 aa16.7■□□□□ 0.26
PLXNA1-201ENST00000393409 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
PLXNA1-201ENST00000393409 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
PLXNA1-201ENST00000393409 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
PLXNA1-201ENST00000393409 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
PLXNA1-201ENST00000393409 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
PLXNA1-201ENST00000393409 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
PLXNA1-201ENST00000393409 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
PLXNA1-201ENST00000393409 CARD11Q9BXL7 1154 aa16.68■□□□□ 0.26
PLXNA1-201ENST00000393409 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
PLXNA1-201ENST00000393409 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
PLXNA1-201ENST00000393409 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
PLXNA1-201ENST00000393409 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
PLXNA1-201ENST00000393409 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
PLXNA1-201ENST00000393409 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
PLXNA1-201ENST00000393409 PLCB2Q00722 1185 aa16.65■□□□□ 0.26
PLXNA1-201ENST00000393409 MCCP23508 829 aa16.64■□□□□ 0.25
PLXNA1-201ENST00000393409 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
PLXNA1-201ENST00000393409 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
PLXNA1-201ENST00000393409 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
PLXNA1-201ENST00000393409 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
PLXNA1-201ENST00000393409 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
PLXNA1-201ENST00000393409 NACADO15069 1562 aa16.6■□□□□ 0.25
PLXNA1-201ENST00000393409 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
PLXNA1-201ENST00000393409 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
PLXNA1-201ENST00000393409 GOLGA6L3A6NEY3 463 aa16.59■□□□□ 0.25
PLXNA1-201ENST00000393409 DRC7Q8IY82 874 aa16.59■□□□□ 0.25
PLXNA1-201ENST00000393409 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
PLXNA1-201ENST00000393409 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
PLXNA1-201ENST00000393409 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
PLXNA1-201ENST00000393409 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
PLXNA1-201ENST00000393409 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
PLXNA1-201ENST00000393409 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
PLXNA1-201ENST00000393409 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
PLXNA1-201ENST00000393409 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
PLXNA1-201ENST00000393409 FGD1P98174 961 aa16.52■□□□□ 0.24
PLXNA1-201ENST00000393409 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
PLXNA1-201ENST00000393409 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
PLXNA1-201ENST00000393409 HAP1P54257 671 aaPredicted RBP16.51■□□□□ 0.23
PLXNA1-201ENST00000393409 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
PLXNA1-201ENST00000393409 PHF14O94880 888 aa16.5■□□□□ 0.23
PLXNA1-201ENST00000393409 A0A0G2JS52 829 aa16.5■□□□□ 0.23
PLXNA1-201ENST00000393409 KCNJ4P48050 445 aa16.5■□□□□ 0.23
PLXNA1-201ENST00000393409 TMF1P82094 1093 aa16.5■□□□□ 0.23
PLXNA1-201ENST00000393409 RALBP1Q15311 655 aa16.49■□□□□ 0.23
PLXNA1-201ENST00000393409 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
PLXNA1-201ENST00000393409 CC2D1BQ5T0F9 858 aaKnown RBP16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms