RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 PNNQ9H307 717 aaKnown RBP7.92□□□□□ -1.14
GTDC1-204ENST00000392869 HTATSF1O43719 755 aaKnown RBP7.92□□□□□ -1.14
GTDC1-204ENST00000392869 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
GTDC1-204ENST00000392869 TNNT3P45378 269 aaPredicted RBP7.91□□□□□ -1.14
GTDC1-204ENST00000392869 SYAP1Q96A49 352 aaPredicted RBP7.91□□□□□ -1.14
GTDC1-204ENST00000392869 CCDC180Q9P1Z9 1646 aa7.9□□□□□ -1.14
GTDC1-204ENST00000392869 NAP1L5Q96NT1 182 aaPredicted RBP7.9□□□□□ -1.15
GTDC1-204ENST00000392869 CHMP4AQ9BY43 222 aa7.9□□□□□ -1.15
GTDC1-204ENST00000392869 ABCC9O60706 1549 aa7.9□□□□□ -1.15
GTDC1-204ENST00000392869 GOLGA6L4A6NEF3 574 aa7.89□□□□□ -1.15
GTDC1-204ENST00000392869 GOLGA6L3A6NEY3 463 aa7.88□□□□□ -1.15
GTDC1-204ENST00000392869 MCCP23508 829 aa7.88□□□□□ -1.15
GTDC1-204ENST00000392869 ESF1Q9H501 851 aaKnown RBP7.88□□□□□ -1.15
GTDC1-204ENST00000392869 CHMP4CQ96CF2 233 aa7.88□□□□□ -1.15
GTDC1-204ENST00000392869 TPM4P67936 248 aa7.87□□□□□ -1.15
GTDC1-204ENST00000392869 CSPP1Q1MSJ5 1256 aa7.87□□□□□ -1.15
GTDC1-204ENST00000392869 ANO8Q9HCE9 1232 aaPredicted RBP7.87□□□□□ -1.15
GTDC1-204ENST00000392869 NBR1Q14596 966 aa7.87□□□□□ -1.15
GTDC1-204ENST00000392869 GPS2Q13227 327 aa7.85□□□□□ -1.15
GTDC1-204ENST00000392869 CFAP53Q96M91 514 aa7.85□□□□□ -1.15
GTDC1-204ENST00000392869 PHF14O94880 888 aa7.85□□□□□ -1.15
GTDC1-204ENST00000392869 EIF4G2P78344 907 aaKnown RBP eCLIP7.85□□□□□ -1.15
GTDC1-204ENST00000392869 FBLN2P98095 1184 aa7.85□□□□□ -1.15
GTDC1-204ENST00000392869 MTERF4Q7Z6M4 381 aaKnown RBP7.84□□□□□ -1.15
GTDC1-204ENST00000392869 EEA1Q15075 1411 aa7.84□□□□□ -1.16
GTDC1-204ENST00000392869 RSPH6AQ9H0K4 717 aa7.83□□□□□ -1.16
GTDC1-204ENST00000392869 NOP58Q9Y2X3 529 aaKnown RBP7.83□□□□□ -1.16
GTDC1-204ENST00000392869 GBP4Q96PP9 640 aa7.83□□□□□ -1.16
GTDC1-204ENST00000392869 PABPN1Q86U42 306 aaKnown RBP eCLIP7.83□□□□□ -1.16
GTDC1-204ENST00000392869 HSCBQ8IWL3 235 aa7.81□□□□□ -1.16
GTDC1-204ENST00000392869 RSF1Q96T23 1441 aaPredicted RBP7.8□□□□□ -1.16
GTDC1-204ENST00000392869 TIMELESSQ9UNS1 1208 aa7.8□□□□□ -1.16
GTDC1-204ENST00000392869 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
GTDC1-204ENST00000392869 HDAC5Q9UQL6 1122 aa7.8□□□□□ -1.16
GTDC1-204ENST00000392869 CCDC70Q6NSX1 233 aa7.79□□□□□ -1.16
GTDC1-204ENST00000392869 FTSJ3Q8IY81 847 aaKnown RBP7.79□□□□□ -1.16
GTDC1-204ENST00000392869 PPP4R2Q9NY27 417 aa7.79□□□□□ -1.16
GTDC1-204ENST00000392869 NOC3LQ8WTT2 800 aaKnown RBP7.78□□□□□ -1.16
GTDC1-204ENST00000392869 BCL11AQ9H165 835 aa7.78□□□□□ -1.16
GTDC1-204ENST00000392869 MRS2Q9HD23 443 aa7.78□□□□□ -1.16
GTDC1-204ENST00000392869 KIF3AQ9Y496 699 aa7.78□□□□□ -1.16
GTDC1-204ENST00000392869 HSP90AB1P08238 724 aaKnown RBP7.78□□□□□ -1.16
GTDC1-204ENST00000392869 SCRIBQ14160 1630 aa7.78□□□□□ -1.16
GTDC1-204ENST00000392869 HMMRO75330 724 aa7.77□□□□□ -1.17
GTDC1-204ENST00000392869 STAG3Q9UJ98 1225 aa7.76□□□□□ -1.17
GTDC1-204ENST00000392869 NUDCQ9Y266 331 aa7.76□□□□□ -1.17
GTDC1-204ENST00000392869 CDR1P51861 262 aa7.76□□□□□ -1.17
GTDC1-204ENST00000392869 TEX35Q5T0J7 233 aa7.75□□□□□ -1.17
GTDC1-204ENST00000392869 FAM9BQ8IZU0 186 aa7.75□□□□□ -1.17
GTDC1-204ENST00000392869 MAP7D2Q96T17 732 aa7.75□□□□□ -1.17
GTDC1-204ENST00000392869 DRC7Q8IY82 874 aa7.75□□□□□ -1.17
GTDC1-204ENST00000392869 ZNF777Q9ULD5 760 aaPredicted RBP7.74□□□□□ -1.17
GTDC1-204ENST00000392869 DHX8Q14562 1220 aaKnown RBP7.74□□□□□ -1.17
GTDC1-204ENST00000392869 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
GTDC1-204ENST00000392869 SKOR2Q2VWA4 1001 aaPredicted RBP7.73□□□□□ -1.17
GTDC1-204ENST00000392869 TSPY4P0CV99 314 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 TSPY10P0CW01 314 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 ATP6V1DQ9Y5K8 247 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 CSRNP3Q8WYN3 585 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 FGD1P98174 961 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 PHLDB1Q86UU1 1377 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 ACBD3Q9H3P7 528 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 KNSTRNQ9Y448 316 aa7.72□□□□□ -1.17
GTDC1-204ENST00000392869 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
GTDC1-204ENST00000392869 P3H3Q8IVL6 736 aa7.71□□□□□ -1.18
GTDC1-204ENST00000392869 CEP89Q96ST8 783 aa7.71□□□□□ -1.18
GTDC1-204ENST00000392869 CWC15Q9P013 229 aaKnown RBP7.71□□□□□ -1.18
GTDC1-204ENST00000392869 DDX11L8A8MPP1 907 aa7.7□□□□□ -1.18
GTDC1-204ENST00000392869 TPM3P06753 285 aa7.7□□□□□ -1.18
GTDC1-204ENST00000392869 HSP90AA2PQ14568 343 aaPredicted RBP7.7□□□□□ -1.18
GTDC1-204ENST00000392869 ARID3CA6NKF2 412 aa7.7□□□□□ -1.18
GTDC1-204ENST00000392869 ARXQ96QS3 562 aa7.7□□□□□ -1.18
GTDC1-204ENST00000392869 CAGE1Q8TC20 777 aa7.7□□□□□ -1.18
GTDC1-204ENST00000392869 TCERG1O14776 1098 aaKnown RBP7.69□□□□□ -1.18
GTDC1-204ENST00000392869 NPM1P06748 294 aaKnown RBP eCLIP7.69□□□□□ -1.18
GTDC1-204ENST00000392869 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
GTDC1-204ENST00000392869 IPO8O15397 1037 aaKnown RBP7.69□□□□□ -1.18
GTDC1-204ENST00000392869 TAF3Q5VWG9 929 aa7.69□□□□□ -1.18
GTDC1-204ENST00000392869 HSP90B1P14625 803 aaKnown RBP7.69□□□□□ -1.18
GTDC1-204ENST00000392869 CCER2I3L3R5 266 aa7.68□□□□□ -1.18
GTDC1-204ENST00000392869 RRP12Q5JTH9 1297 aaKnown RBP7.68□□□□□ -1.18
GTDC1-204ENST00000392869 PLCB2Q00722 1185 aa7.68□□□□□ -1.18
GTDC1-204ENST00000392869 CCDC66A2RUB6 948 aa7.68□□□□□ -1.18
GTDC1-204ENST00000392869 TPM1P09493 284 aa7.68□□□□□ -1.18
GTDC1-204ENST00000392869 GNL2Q13823 731 aaKnown RBP7.68□□□□□ -1.18
GTDC1-204ENST00000392869 TSR1Q2NL82 804 aaKnown RBP7.68□□□□□ -1.18
GTDC1-204ENST00000392869 KCNJ4P48050 445 aa7.68□□□□□ -1.18
GTDC1-204ENST00000392869 TPM2P07951 284 aa7.67□□□□□ -1.18
GTDC1-204ENST00000392869 WWC1Q8IX03 1113 aa7.67□□□□□ -1.18
GTDC1-204ENST00000392869 GOLGA2Q08379 1002 aa7.67□□□□□ -1.18
GTDC1-204ENST00000392869 MTUS2Q5JR59 1369 aa7.66□□□□□ -1.18
GTDC1-204ENST00000392869 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
GTDC1-204ENST00000392869 KIAA1211Q6ZU35 1233 aa7.66□□□□□ -1.18
GTDC1-204ENST00000392869 CEP162Q5TB80 1403 aa7.66□□□□□ -1.18
GTDC1-204ENST00000392869 ARGLU1Q9NWB6 273 aaPredicted RBP7.66□□□□□ -1.18
GTDC1-204ENST00000392869 NEXNQ0ZGT2 675 aa7.66□□□□□ -1.18
GTDC1-204ENST00000392869 MYO6Q9UM54 1294 aa7.66□□□□□ -1.18
GTDC1-204ENST00000392869 KIF16BQ96L93 1317 aa7.65□□□□□ -1.18
GTDC1-204ENST00000392869 GPATCH3Q96I76 525 aa7.65□□□□□ -1.18
GTDC1-204ENST00000392869 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms