RNA–Protein interactions for RNA: ENST00000392854.4

LYPD6-202, Transcript of LY6/PLAUR domain containing 6, humanhuman

TSL 1 (best)

Gene LYPD6, Length 1,580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD6-202ENST00000392854 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
LYPD6-202ENST00000392854 IGF1RP08069 1367 aa11.23□□□□□ -0.61
LYPD6-202ENST00000392854 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
LYPD6-202ENST00000392854 NUP160Q12769 1436 aa11.22□□□□□ -0.61
LYPD6-202ENST00000392854 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
LYPD6-202ENST00000392854 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
LYPD6-202ENST00000392854 CUL7Q14999 1698 aa11.17□□□□□ -0.62
LYPD6-202ENST00000392854 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
LYPD6-202ENST00000392854 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
LYPD6-202ENST00000392854 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
LYPD6-202ENST00000392854 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
LYPD6-202ENST00000392854 KIAA0586Q9BVV6 1533 aa11.11□□□□□ -0.63
LYPD6-202ENST00000392854 ERCC6L2Q5T890 1561 aa11.1□□□□□ -0.63
LYPD6-202ENST00000392854 PRG4Q92954 1404 aaPredicted RBP11.1□□□□□ -0.63
LYPD6-202ENST00000392854 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
LYPD6-202ENST00000392854 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
LYPD6-202ENST00000392854 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
LYPD6-202ENST00000392854 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
LYPD6-202ENST00000392854 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
LYPD6-202ENST00000392854 CARMIL2Q6F5E8 1435 aa11□□□□□ -0.65
LYPD6-202ENST00000392854 EEA1Q15075 1411 aa10.99□□□□□ -0.65
LYPD6-202ENST00000392854 TNIKQ9UKE5 1360 aa10.96□□□□□ -0.66
LYPD6-202ENST00000392854 PTPRGP23470 1445 aa10.96□□□□□ -0.66
LYPD6-202ENST00000392854 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
LYPD6-202ENST00000392854 UGGT2Q9NYU1 1516 aa10.95□□□□□ -0.66
LYPD6-202ENST00000392854 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
LYPD6-202ENST00000392854 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
LYPD6-202ENST00000392854 CTTNBP2Q8WZ74 1663 aa10.94□□□□□ -0.66
LYPD6-202ENST00000392854 TTBK1Q5TCY1 1321 aaPredicted RBP10.94□□□□□ -0.66
LYPD6-202ENST00000392854 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
LYPD6-202ENST00000392854 KIAA0556O60303 1618 aa10.9□□□□□ -0.66
LYPD6-202ENST00000392854 GOLGA3Q08378 1498 aa10.9□□□□□ -0.67
LYPD6-202ENST00000392854 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
LYPD6-202ENST00000392854 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
LYPD6-202ENST00000392854 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
LYPD6-202ENST00000392854 ABCC2Q92887 1545 aa10.86□□□□□ -0.67
LYPD6-202ENST00000392854 KIF21BO75037 1637 aa10.86□□□□□ -0.67
LYPD6-202ENST00000392854 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
LYPD6-202ENST00000392854 ABCC10Q5T3U5 1492 aa10.84□□□□□ -0.67
LYPD6-202ENST00000392854 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
LYPD6-202ENST00000392854 KIF13AQ9H1H9 1805 aa10.83□□□□□ -0.68
LYPD6-202ENST00000392854 KDM5BQ9UGL1 1544 aa10.82□□□□□ -0.68
LYPD6-202ENST00000392854 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
LYPD6-202ENST00000392854 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
LYPD6-202ENST00000392854 RANGAP1P46060 587 aaPredicted RBP10.81□□□□□ -0.68
LYPD6-202ENST00000392854 SAMD9Q5K651 1589 aa10.81□□□□□ -0.68
LYPD6-202ENST00000392854 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
LYPD6-202ENST00000392854 ASXL2Q76L83 1435 aa10.8□□□□□ -0.68
LYPD6-202ENST00000392854 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
LYPD6-202ENST00000392854 ABCA8O94911 1581 aa10.79□□□□□ -0.68
LYPD6-202ENST00000392854 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
LYPD6-202ENST00000392854 FHOD3Q2V2M9 1422 aa10.74□□□□□ -0.69
LYPD6-202ENST00000392854 EFCAB5A4FU69 1503 aa10.74□□□□□ -0.69
LYPD6-202ENST00000392854 GLI2P10070 1586 aa10.74□□□□□ -0.69
LYPD6-202ENST00000392854 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
LYPD6-202ENST00000392854 ATP10BO94823 1461 aa10.73□□□□□ -0.69
LYPD6-202ENST00000392854 WDR7Q9Y4E6 1490 aa10.73□□□□□ -0.69
LYPD6-202ENST00000392854 RAPGEF6Q8TEU7 1601 aa10.72□□□□□ -0.69
LYPD6-202ENST00000392854 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
LYPD6-202ENST00000392854 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
LYPD6-202ENST00000392854 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
LYPD6-202ENST00000392854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
LYPD6-202ENST00000392854 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
LYPD6-202ENST00000392854 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
LYPD6-202ENST00000392854 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
LYPD6-202ENST00000392854 MAP3K4Q9Y6R4 1608 aa10.68□□□□□ -0.7
LYPD6-202ENST00000392854 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
LYPD6-202ENST00000392854 PPRC1Q5VV67 1664 aaKnown RBP10.67□□□□□ -0.7
LYPD6-202ENST00000392854 CD109Q6YHK3 1445 aa10.65□□□□□ -0.7
LYPD6-202ENST00000392854 PLEKHD1A6NEE1 506 aa10.65□□□□□ -0.7
LYPD6-202ENST00000392854 KDM6BO15054 1643 aa10.65□□□□□ -0.7
LYPD6-202ENST00000392854 TEX14Q8IWB6 1497 aa10.65□□□□□ -0.7
LYPD6-202ENST00000392854 CFAP43Q8NDM7 1665 aa10.64□□□□□ -0.71
LYPD6-202ENST00000392854 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
LYPD6-202ENST00000392854 MAGI3Q5TCQ9 1506 aa10.63□□□□□ -0.71
LYPD6-202ENST00000392854 CLIP1P30622 1438 aa10.6□□□□□ -0.71
LYPD6-202ENST00000392854 COL17A1Q9UMD9 1497 aaPredicted RBP10.6□□□□□ -0.71
LYPD6-202ENST00000392854 HECW1Q76N89 1606 aa10.6□□□□□ -0.71
LYPD6-202ENST00000392854 ABCA9Q8IUA7 1624 aa10.6□□□□□ -0.71
LYPD6-202ENST00000392854 CDK11AQ9UQ88 783 aaPredicted RBP10.6□□□□□ -0.71
LYPD6-202ENST00000392854 CDK13Q14004 1512 aaKnown RBP10.59□□□□□ -0.71
LYPD6-202ENST00000392854 PHLDB1Q86UU1 1377 aa10.57□□□□□ -0.72
LYPD6-202ENST00000392854 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
LYPD6-202ENST00000392854 LOC105371045A0A1W2PR82 267 aa10.56□□□□□ -0.72
LYPD6-202ENST00000392854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.55□□□□□ -0.72
LYPD6-202ENST00000392854 ARAP3Q8WWN8 1544 aa10.54□□□□□ -0.72
LYPD6-202ENST00000392854 NEO1Q92859 1461 aa10.54□□□□□ -0.72
LYPD6-202ENST00000392854 LRRIQ1Q96JM4 1722 aa10.54□□□□□ -0.72
LYPD6-202ENST00000392854 CEP162Q5TB80 1403 aa10.53□□□□□ -0.72
LYPD6-202ENST00000392854 CCDC18Q5T9S5 1454 aa10.53□□□□□ -0.72
LYPD6-202ENST00000392854 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
LYPD6-202ENST00000392854 FYCO1Q9BQS8 1478 aa10.52□□□□□ -0.72
LYPD6-202ENST00000392854 TROQ12816 1431 aaPredicted RBP10.52□□□□□ -0.72
LYPD6-202ENST00000392854 TTC37Q6PGP7 1564 aa10.51□□□□□ -0.73
LYPD6-202ENST00000392854 PLCH2O75038 1416 aa10.51□□□□□ -0.73
LYPD6-202ENST00000392854 FANCAO15360 1455 aa10.5□□□□□ -0.73
LYPD6-202ENST00000392854 RAPGEF3O95398 923 aa10.5□□□□□ -0.73
LYPD6-202ENST00000392854 AKNAQ7Z591 1439 aa10.5□□□□□ -0.73
LYPD6-202ENST00000392854 KIF14Q15058 1648 aa10.49□□□□□ -0.73
LYPD6-202ENST00000392854 KDM4FA0A1W2PPD8 638 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms