RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 FHAD1B1AJZ9 1412 aa38.5■■■■□ 3.75
SMARCD3-203ENST00000392811 RRBP1Q9P2E9 1410 aaKnown RBP38.5■■■■□ 3.75
SMARCD3-203ENST00000392811 EFCAB5A4FU69 1503 aa38.5■■■■□ 3.75
SMARCD3-203ENST00000392811 P3H3Q8IVL6 736 aa38.46■■■■□ 3.75
SMARCD3-203ENST00000392811 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
SMARCD3-203ENST00000392811 PCF11O94913 1555 aaKnown RBP38.43■■■■□ 3.74
SMARCD3-203ENST00000392811 FHOD3Q2V2M9 1422 aa38.42■■■■□ 3.74
SMARCD3-203ENST00000392811 CFAP43Q8NDM7 1665 aa38.35■■■■□ 3.73
SMARCD3-203ENST00000392811 LRRC9Q6ZRR7 1453 aa38.34■■■■□ 3.73
SMARCD3-203ENST00000392811 CCNB3Q8WWL7 1395 aa38.33■■■■□ 3.73
SMARCD3-203ENST00000392811 PBRM1Q86U86 1689 aa38.3■■■■□ 3.72
SMARCD3-203ENST00000392811 FYCO1Q9BQS8 1478 aa38.29■■■■□ 3.72
SMARCD3-203ENST00000392811 AQRO60306 1485 aaKnown RBP eCLIP38.27■■■■□ 3.72
SMARCD3-203ENST00000392811 CASKIN1Q8WXD9 1431 aa38.26■■■■□ 3.71
SMARCD3-203ENST00000392811 SAMD9Q5K651 1589 aa38.23■■■■□ 3.71
SMARCD3-203ENST00000392811 ATP1B4Q9UN42 357 aaPredicted RBP38.19■■■■□ 3.7
SMARCD3-203ENST00000392811 WDR62O43379 1518 aa38.19■■■■□ 3.7
SMARCD3-203ENST00000392811 FMN1Q68DA7 1419 aa38.19■■■■□ 3.7
SMARCD3-203ENST00000392811 ADAMTS12P58397 1594 aa38.13■■■■□ 3.69
SMARCD3-203ENST00000392811 SNAPC4Q5SXM2 1469 aa38.12■■■■□ 3.69
SMARCD3-203ENST00000392811 IFT140Q96RY7 1462 aa38.12■■■■□ 3.69
SMARCD3-203ENST00000392811 PHLDB1Q86UU1 1377 aa38.12■■■■□ 3.69
SMARCD3-203ENST00000392811 GRIN2BQ13224 1484 aa38.1■■■■□ 3.69
SMARCD3-203ENST00000392811 DHX57Q6P158 1386 aaKnown RBP38.07■■■■□ 3.69
SMARCD3-203ENST00000392811 ZNF608Q9ULD9 1512 aaPredicted RBP38.04■■■■□ 3.68
SMARCD3-203ENST00000392811 ITGAEP38570 1179 aa38.02■■■■□ 3.68
SMARCD3-203ENST00000392811 CLSPNQ9HAW4 1339 aa37.99■■■■□ 3.67
SMARCD3-203ENST00000392811 ERCC6Q03468 1493 aa37.97■■■■□ 3.67
SMARCD3-203ENST00000392811 IQGAP2Q13576 1575 aa37.95■■■■□ 3.67
SMARCD3-203ENST00000392811 LRRIQ1Q96JM4 1722 aa37.93■■■■□ 3.66
SMARCD3-203ENST00000392811 THOC2Q8NI27 1593 aaKnown RBP37.9■■■■□ 3.66
SMARCD3-203ENST00000392811 ZNF316A6NFI3 1004 aaPredicted RBP37.87■■■■□ 3.65
SMARCD3-203ENST00000392811 FAM50AQ14320 339 aaKnown RBP37.86■■■■□ 3.65
SMARCD3-203ENST00000392811 DIEXFQ68CQ4 756 aaKnown RBP37.86■■■■□ 3.65
SMARCD3-203ENST00000392811 EIF4G3O43432 1585 aaKnown RBP37.85■■■■□ 3.65
SMARCD3-203ENST00000392811 MTUS2Q5JR59 1369 aa37.82■■■■□ 3.64
SMARCD3-203ENST00000392811 RAB3GAP2Q9H2M9 1393 aa37.82■■■■□ 3.64
SMARCD3-203ENST00000392811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.76■■■■□ 3.64
SMARCD3-203ENST00000392811 SETD5Q9C0A6 1442 aa37.76■■■■□ 3.63
SMARCD3-203ENST00000392811 UGGT2Q9NYU1 1516 aa37.75■■■■□ 3.63
SMARCD3-203ENST00000392811 FGD6Q6ZV73 1430 aa37.72■■■■□ 3.63
SMARCD3-203ENST00000392811 EHBP1L1Q8N3D4 1523 aa37.69■■■■□ 3.62
SMARCD3-203ENST00000392811 GRIN2AQ12879 1464 aa37.68■■■■□ 3.62
SMARCD3-203ENST00000392811 CCDC18Q5T9S5 1454 aa37.68■■■■□ 3.62
SMARCD3-203ENST00000392811 HECW1Q76N89 1606 aa37.68■■■■□ 3.62
SMARCD3-203ENST00000392811 KIAA0586Q9BVV6 1533 aa37.68■■■■□ 3.62
SMARCD3-203ENST00000392811 NCOA2Q15596 1464 aa37.66■■■■□ 3.62
SMARCD3-203ENST00000392811 SUPT6HQ7KZ85 1726 aaKnown RBP37.65■■■■□ 3.62
SMARCD3-203ENST00000392811 MAGI1Q96QZ7 1491 aaPredicted RBP37.61■■■■□ 3.61
SMARCD3-203ENST00000392811 MAGI3Q5TCQ9 1506 aa37.61■■■■□ 3.61
SMARCD3-203ENST00000392811 MYOM3Q5VTT5 1437 aa37.58■■■■□ 3.61
SMARCD3-203ENST00000392811 MAPKBP1O60336 1514 aa37.57■■■■□ 3.6
SMARCD3-203ENST00000392811 EPRSP07814 1512 aaKnown RBP37.56■■■■□ 3.6
SMARCD3-203ENST00000392811 KIAA0556O60303 1618 aa37.56■■■■□ 3.6
SMARCD3-203ENST00000392811 DISP1Q96F81 1524 aa37.55■■■■□ 3.6
SMARCD3-203ENST00000392811 ARHGEF11O15085 1522 aa37.54■■■■□ 3.6
SMARCD3-203ENST00000392811 SYNJ2O15056 1496 aa37.51■■■■□ 3.6
SMARCD3-203ENST00000392811 CDK13Q14004 1512 aaKnown RBP37.49■■■■□ 3.59
SMARCD3-203ENST00000392811 CHMP7Q8WUX9 453 aaPredicted RBP37.46■■■■□ 3.59
SMARCD3-203ENST00000392811 CEP170Q5SW79 1584 aa37.45■■■■□ 3.59
SMARCD3-203ENST00000392811 PTPN23Q9H3S7 1636 aa37.42■■■■□ 3.58
SMARCD3-203ENST00000392811 PTPRKQ15262 1439 aa37.42■■■■□ 3.58
SMARCD3-203ENST00000392811 ARID3CA6NKF2 412 aa37.34■■■■□ 3.57
SMARCD3-203ENST00000392811 FBLN2P98095 1184 aa37.34■■■■□ 3.57
SMARCD3-203ENST00000392811 HFM1A2PYH4 1435 aa37.33■■■■□ 3.57
SMARCD3-203ENST00000392811 RAPGEF6Q8TEU7 1601 aa37.33■■■■□ 3.57
SMARCD3-203ENST00000392811 TCOF1Q13428 1488 aaKnown RBP37.31■■■■□ 3.56
SMARCD3-203ENST00000392811 NUP160Q12769 1436 aa37.31■■■■□ 3.56
SMARCD3-203ENST00000392811 NUP153P49790 1475 aaKnown RBP37.31■■■■□ 3.56
SMARCD3-203ENST00000392811 NAIPQ13075 1403 aa37.23■■■■□ 3.55
SMARCD3-203ENST00000392811 MIA2Q96PC5 1412 aa37.22■■■■□ 3.55
SMARCD3-203ENST00000392811 SIN3AQ96ST3 1273 aa37.19■■■■□ 3.54
SMARCD3-203ENST00000392811 JPH4Q96JJ6 628 aa37.16■■■■□ 3.54
SMARCD3-203ENST00000392811 CARMIL2Q6F5E8 1435 aa37.16■■■■□ 3.54
SMARCD3-203ENST00000392811 UACAQ9BZF9 1416 aa37.14■■■■□ 3.54
SMARCD3-203ENST00000392811 MIER1Q8N108 512 aa37.14■■■■□ 3.54
SMARCD3-203ENST00000392811 NEUROD1Q13562 356 aa37.12■■■■□ 3.53
SMARCD3-203ENST00000392811 PLB1Q6P1J6 1458 aa37.12■■■■□ 3.53
SMARCD3-203ENST00000392811 CDK11AQ9UQ88 783 aaPredicted RBP37.09■■■■□ 3.53
SMARCD3-203ENST00000392811 GCC2Q8IWJ2 1684 aa37.06■■■■□ 3.52
SMARCD3-203ENST00000392811 TIMELESSQ9UNS1 1208 aa37.05■■■■□ 3.52
SMARCD3-203ENST00000392811 AKNAQ7Z591 1439 aa37.03■■■■□ 3.52
SMARCD3-203ENST00000392811 CHIC2Q9UKJ5 165 aa37.03■■■■□ 3.52
SMARCD3-203ENST00000392811 RRP7BPQ9NSQ0 103 aa37.02■■■■□ 3.52
SMARCD3-203ENST00000392811 TROQ12816 1431 aaPredicted RBP37.01■■■■□ 3.51
SMARCD3-203ENST00000392811 PRG4Q92954 1404 aaPredicted RBP37■■■■□ 3.51
SMARCD3-203ENST00000392811 ACIN1Q9UKV3 1341 aaKnown RBP36.99■■■■□ 3.51
SMARCD3-203ENST00000392811 CENPBP07199 599 aaPredicted RBP36.95■■■■□ 3.51
SMARCD3-203ENST00000392811 SCAF1Q9H7N4 1312 aaKnown RBP36.95■■■■□ 3.5
SMARCD3-203ENST00000392811 ABCA8O94911 1581 aa36.93■■■■□ 3.5
SMARCD3-203ENST00000392811 DAPK1P53355 1430 aa36.91■■■■□ 3.5
SMARCD3-203ENST00000392811 DNMT1P26358 1616 aaKnown RBP36.91■■■■□ 3.5
SMARCD3-203ENST00000392811 KDM6BO15054 1643 aa36.9■■■■□ 3.5
SMARCD3-203ENST00000392811 ADCY10Q96PN6 1610 aa36.9■■■■□ 3.5
SMARCD3-203ENST00000392811 ZNF644Q9H582 1327 aaPredicted RBP36.87■■■■□ 3.49
SMARCD3-203ENST00000392811 KIF14Q15058 1648 aa36.87■■■■□ 3.49
SMARCD3-203ENST00000392811 ABCC5O15440 1437 aa36.86■■■■□ 3.49
SMARCD3-203ENST00000392811 CHD1O14646 1710 aa36.85■■■■□ 3.49
SMARCD3-203ENST00000392811 PPP1R15AO75807 674 aaPredicted RBP36.85■■■■□ 3.49
SMARCD3-203ENST00000392811 ITSN2Q9NZM3 1697 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms