RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
USP30-203ENST00000392784 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
USP30-203ENST00000392784 THOC2Q8NI27 1593 aaKnown RBP14.23□□□□□ -0.13
USP30-203ENST00000392784 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
USP30-203ENST00000392784 PCF11O94913 1555 aaKnown RBP14.21□□□□□ -0.13
USP30-203ENST00000392784 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
USP30-203ENST00000392784 ADAMTS12P58397 1594 aa14.2□□□□□ -0.14
USP30-203ENST00000392784 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
USP30-203ENST00000392784 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
USP30-203ENST00000392784 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
USP30-203ENST00000392784 EFCAB5A4FU69 1503 aa14.17□□□□□ -0.14
USP30-203ENST00000392784 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
USP30-203ENST00000392784 ZEB1P37275 1124 aaPredicted RBP14.16□□□□□ -0.14
USP30-203ENST00000392784 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
USP30-203ENST00000392784 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
USP30-203ENST00000392784 SAMD9Q5K651 1589 aa14.15□□□□□ -0.14
USP30-203ENST00000392784 CFAP43Q8NDM7 1665 aa14.13□□□□□ -0.15
USP30-203ENST00000392784 ATP1B4Q9UN42 357 aaPredicted RBP14.13□□□□□ -0.15
USP30-203ENST00000392784 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
USP30-203ENST00000392784 LRRIQ1Q96JM4 1722 aa14.11□□□□□ -0.15
USP30-203ENST00000392784 LRRC9Q6ZRR7 1453 aa14.09□□□□□ -0.15
USP30-203ENST00000392784 MAP3K1Q13233 1512 aa14.09□□□□□ -0.15
USP30-203ENST00000392784 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.15
USP30-203ENST00000392784 IQGAP2Q13576 1575 aa14.08□□□□□ -0.16
USP30-203ENST00000392784 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.16
USP30-203ENST00000392784 RRBP1Q9P2E9 1410 aaKnown RBP14.08□□□□□ -0.16
USP30-203ENST00000392784 FMN1Q68DA7 1419 aa14.04□□□□□ -0.16
USP30-203ENST00000392784 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
USP30-203ENST00000392784 GRIN2AQ12879 1464 aa14.03□□□□□ -0.16
USP30-203ENST00000392784 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.16
USP30-203ENST00000392784 ITGAEP38570 1179 aa14□□□□□ -0.17
USP30-203ENST00000392784 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
USP30-203ENST00000392784 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
USP30-203ENST00000392784 UGGT2Q9NYU1 1516 aa13.98□□□□□ -0.17
USP30-203ENST00000392784 KIAA0586Q9BVV6 1533 aa13.97□□□□□ -0.17
USP30-203ENST00000392784 FBLN2P98095 1184 aa13.97□□□□□ -0.17
USP30-203ENST00000392784 SYNJ2O15056 1496 aa13.96□□□□□ -0.17
USP30-203ENST00000392784 DISP1Q96F81 1524 aa13.96□□□□□ -0.17
USP30-203ENST00000392784 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
USP30-203ENST00000392784 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
USP30-203ENST00000392784 KIAA0556O60303 1618 aa13.94□□□□□ -0.18
USP30-203ENST00000392784 ARID3CA6NKF2 412 aa13.93□□□□□ -0.18
USP30-203ENST00000392784 MTUS2Q5JR59 1369 aa13.92□□□□□ -0.18
USP30-203ENST00000392784 CDK13Q14004 1512 aaKnown RBP13.92□□□□□ -0.18
USP30-203ENST00000392784 FAM50AQ14320 339 aaKnown RBP13.92□□□□□ -0.18
USP30-203ENST00000392784 HECW1Q76N89 1606 aa13.91□□□□□ -0.18
USP30-203ENST00000392784 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
USP30-203ENST00000392784 EPRSP07814 1512 aaKnown RBP13.89□□□□□ -0.19
USP30-203ENST00000392784 NCOA2Q15596 1464 aa13.88□□□□□ -0.19
USP30-203ENST00000392784 NUP160Q12769 1436 aa13.88□□□□□ -0.19
USP30-203ENST00000392784 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
USP30-203ENST00000392784 EHBP1L1Q8N3D4 1523 aa13.87□□□□□ -0.19
USP30-203ENST00000392784 FGD6Q6ZV73 1430 aa13.87□□□□□ -0.19
USP30-203ENST00000392784 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
USP30-203ENST00000392784 CHD1O14646 1710 aa13.85□□□□□ -0.19
USP30-203ENST00000392784 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
USP30-203ENST00000392784 RAPGEF6Q8TEU7 1601 aa13.84□□□□□ -0.19
USP30-203ENST00000392784 NUP153P49790 1475 aaKnown RBP13.84□□□□□ -0.19
USP30-203ENST00000392784 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
USP30-203ENST00000392784 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
USP30-203ENST00000392784 MYOM3Q5VTT5 1437 aa13.82□□□□□ -0.2
USP30-203ENST00000392784 PLB1Q6P1J6 1458 aa13.81□□□□□ -0.2
USP30-203ENST00000392784 PTPRKQ15262 1439 aa13.8□□□□□ -0.2
USP30-203ENST00000392784 SETD5Q9C0A6 1442 aa13.8□□□□□ -0.2
USP30-203ENST00000392784 PTPN23Q9H3S7 1636 aa13.79□□□□□ -0.2
USP30-203ENST00000392784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP30-203ENST00000392784 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
USP30-203ENST00000392784 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
USP30-203ENST00000392784 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
USP30-203ENST00000392784 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
USP30-203ENST00000392784 ABCA8O94911 1581 aa13.71□□□□□ -0.21
USP30-203ENST00000392784 TCOF1Q13428 1488 aaKnown RBP13.71□□□□□ -0.21
USP30-203ENST00000392784 KIF14Q15058 1648 aa13.71□□□□□ -0.21
USP30-203ENST00000392784 ERCC6L2Q5T890 1561 aa13.7□□□□□ -0.22
USP30-203ENST00000392784 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
USP30-203ENST00000392784 HFM1A2PYH4 1435 aa13.68□□□□□ -0.22
USP30-203ENST00000392784 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
USP30-203ENST00000392784 ZNF644Q9H582 1327 aaPredicted RBP13.67□□□□□ -0.22
USP30-203ENST00000392784 NAIPQ13075 1403 aa13.67□□□□□ -0.22
USP30-203ENST00000392784 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
USP30-203ENST00000392784 TROQ12816 1431 aaPredicted RBP13.67□□□□□ -0.22
USP30-203ENST00000392784 MIA2Q96PC5 1412 aa13.66□□□□□ -0.22
USP30-203ENST00000392784 KDM6BO15054 1643 aa13.65□□□□□ -0.22
USP30-203ENST00000392784 ATP10BO94823 1461 aa13.65□□□□□ -0.22
USP30-203ENST00000392784 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
USP30-203ENST00000392784 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.23
USP30-203ENST00000392784 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
USP30-203ENST00000392784 PTPRGP23470 1445 aa13.64□□□□□ -0.23
USP30-203ENST00000392784 DIEXFQ68CQ4 756 aaKnown RBP13.64□□□□□ -0.23
USP30-203ENST00000392784 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
USP30-203ENST00000392784 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
USP30-203ENST00000392784 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
USP30-203ENST00000392784 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
USP30-203ENST00000392784 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
USP30-203ENST00000392784 CDC42BPAQ5VT25 1732 aa13.6□□□□□ -0.23
USP30-203ENST00000392784 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
USP30-203ENST00000392784 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
USP30-203ENST00000392784 DAPK1P53355 1430 aa13.6□□□□□ -0.23
USP30-203ENST00000392784 ABCC5O15440 1437 aa13.59□□□□□ -0.23
USP30-203ENST00000392784 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms