RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 APLP2Q06481 763 aa30.89■■■□□ 2.53
PTPN11-202ENST00000392597 MAGI1Q96QZ7 1491 aaPredicted RBP30.87■■■□□ 2.53
PTPN11-202ENST00000392597 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
PTPN11-202ENST00000392597 ZEB1P37275 1124 aaPredicted RBP30.8■■■□□ 2.52
PTPN11-202ENST00000392597 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
PTPN11-202ENST00000392597 TTBK1Q5TCY1 1321 aaPredicted RBP30.79■■■□□ 2.52
PTPN11-202ENST00000392597 CTTNBP2Q8WZ74 1663 aa30.77■■■□□ 2.52
PTPN11-202ENST00000392597 FHAD1B1AJZ9 1412 aa30.76■■■□□ 2.52
PTPN11-202ENST00000392597 SYNJ2O15056 1496 aa30.74■■■□□ 2.51
PTPN11-202ENST00000392597 EFCAB5A4FU69 1503 aa30.71■■■□□ 2.51
PTPN11-202ENST00000392597 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
PTPN11-202ENST00000392597 MAP3K1Q13233 1512 aa30.63■■■□□ 2.49
PTPN11-202ENST00000392597 CHD1O14646 1710 aa30.61■■■□□ 2.49
PTPN11-202ENST00000392597 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
PTPN11-202ENST00000392597 FBLN2P98095 1184 aa30.59■■■□□ 2.49
PTPN11-202ENST00000392597 TIAM1Q13009 1591 aa30.5■■■□□ 2.47
PTPN11-202ENST00000392597 KANK4Q5T7N3 995 aaPredicted RBP30.49■■■□□ 2.47
PTPN11-202ENST00000392597 SAMD9Q5K651 1589 aa30.49■■■□□ 2.47
PTPN11-202ENST00000392597 NUP160Q12769 1436 aa30.46■■■□□ 2.47
PTPN11-202ENST00000392597 FHOD3Q2V2M9 1422 aa30.46■■■□□ 2.47
PTPN11-202ENST00000392597 PCF11O94913 1555 aaKnown RBP30.45■■■□□ 2.47
PTPN11-202ENST00000392597 FYCO1Q9BQS8 1478 aa30.44■■■□□ 2.46
PTPN11-202ENST00000392597 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
PTPN11-202ENST00000392597 CFAP43Q8NDM7 1665 aa30.42■■■□□ 2.46
PTPN11-202ENST00000392597 FMN1Q68DA7 1419 aa30.42■■■□□ 2.46
PTPN11-202ENST00000392597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.41■■■□□ 2.46
PTPN11-202ENST00000392597 CASKIN1Q8WXD9 1431 aa30.41■■■□□ 2.46
PTPN11-202ENST00000392597 CCER1Q8TC90 406 aaPredicted RBP30.39■■■□□ 2.46
PTPN11-202ENST00000392597 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
PTPN11-202ENST00000392597 OSCARQ8IYS5 282 aa30.38■■■□□ 2.45
PTPN11-202ENST00000392597 P3H3Q8IVL6 736 aa30.37■■■□□ 2.45
PTPN11-202ENST00000392597 LRRC9Q6ZRR7 1453 aa30.35■■■□□ 2.45
PTPN11-202ENST00000392597 IQGAP2Q13576 1575 aa30.34■■■□□ 2.45
PTPN11-202ENST00000392597 KIAA0586Q9BVV6 1533 aa30.33■■■□□ 2.45
PTPN11-202ENST00000392597 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
PTPN11-202ENST00000392597 HNRNPUL2Q1KMD3 747 aaKnown RBP30.28■■■□□ 2.44
PTPN11-202ENST00000392597 CCNB3Q8WWL7 1395 aa30.22■■■□□ 2.43
PTPN11-202ENST00000392597 UGGT2Q9NYU1 1516 aa30.21■■■□□ 2.43
PTPN11-202ENST00000392597 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
PTPN11-202ENST00000392597 ATP1B4Q9UN42 357 aaPredicted RBP30.12■■■□□ 2.41
PTPN11-202ENST00000392597 JPH4Q96JJ6 628 aa30.12■■■□□ 2.41
PTPN11-202ENST00000392597 LRRIQ1Q96JM4 1722 aa30.08■■■□□ 2.41
PTPN11-202ENST00000392597 PHLDB1Q86UU1 1377 aa30.08■■■□□ 2.41
PTPN11-202ENST00000392597 CCDC18Q5T9S5 1454 aa30.04■■■□□ 2.4
PTPN11-202ENST00000392597 HECW1Q76N89 1606 aa30.04■■■□□ 2.4
PTPN11-202ENST00000392597 PRG4Q92954 1404 aaPredicted RBP30.01■■■□□ 2.4
PTPN11-202ENST00000392597 KIAA0556O60303 1618 aa30.01■■■□□ 2.39
PTPN11-202ENST00000392597 DISP1Q96F81 1524 aa29.99■■■□□ 2.39
PTPN11-202ENST00000392597 MTUS2Q5JR59 1369 aa29.98■■■□□ 2.39
PTPN11-202ENST00000392597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.98■■■□□ 2.39
PTPN11-202ENST00000392597 EHBP1L1Q8N3D4 1523 aa29.97■■■□□ 2.39
PTPN11-202ENST00000392597 CARMIL2Q6F5E8 1435 aa29.97■■■□□ 2.39
PTPN11-202ENST00000392597 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
PTPN11-202ENST00000392597 ARHGEF11O15085 1522 aa29.92■■■□□ 2.38
PTPN11-202ENST00000392597 SUPT6HQ7KZ85 1726 aaKnown RBP29.91■■■□□ 2.38
PTPN11-202ENST00000392597 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
PTPN11-202ENST00000392597 EPRSP07814 1512 aaKnown RBP29.89■■■□□ 2.38
PTPN11-202ENST00000392597 FGD6Q6ZV73 1430 aa29.86■■■□□ 2.37
PTPN11-202ENST00000392597 NCOA2Q15596 1464 aa29.85■■■□□ 2.37
PTPN11-202ENST00000392597 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.37
PTPN11-202ENST00000392597 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.37
PTPN11-202ENST00000392597 DHX57Q6P158 1386 aaKnown RBP29.82■■■□□ 2.37
PTPN11-202ENST00000392597 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.37
PTPN11-202ENST00000392597 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
PTPN11-202ENST00000392597 MAGI3Q5TCQ9 1506 aa29.81■■■□□ 2.36
PTPN11-202ENST00000392597 FAM50AQ14320 339 aaKnown RBP29.8■■■□□ 2.36
PTPN11-202ENST00000392597 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
PTPN11-202ENST00000392597 RAPGEF6Q8TEU7 1601 aa29.79■■■□□ 2.36
PTPN11-202ENST00000392597 ITGAEP38570 1179 aa29.78■■■□□ 2.36
PTPN11-202ENST00000392597 CDK13Q14004 1512 aaKnown RBP29.75■■■□□ 2.35
PTPN11-202ENST00000392597 SETD5Q9C0A6 1442 aa29.74■■■□□ 2.35
PTPN11-202ENST00000392597 PTPRGP23470 1445 aa29.73■■■□□ 2.35
PTPN11-202ENST00000392597 NUP153P49790 1475 aaKnown RBP29.72■■■□□ 2.35
PTPN11-202ENST00000392597 RAB3GAP2Q9H2M9 1393 aa29.71■■■□□ 2.35
PTPN11-202ENST00000392597 PTPN23Q9H3S7 1636 aa29.65■■■□□ 2.34
PTPN11-202ENST00000392597 TCOF1Q13428 1488 aaKnown RBP29.63■■■□□ 2.33
PTPN11-202ENST00000392597 MIA2Q96PC5 1412 aa29.61■■■□□ 2.33
PTPN11-202ENST00000392597 CDK11AQ9UQ88 783 aaPredicted RBP29.59■■■□□ 2.33
PTPN11-202ENST00000392597 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
PTPN11-202ENST00000392597 ABCA8O94911 1581 aa29.58■■■□□ 2.33
PTPN11-202ENST00000392597 UACAQ9BZF9 1416 aa29.58■■■□□ 2.33
PTPN11-202ENST00000392597 CYB5RLQ6IPT4 315 aa29.56■■■□□ 2.32
PTPN11-202ENST00000392597 ABCC2Q92887 1545 aa29.53■■■□□ 2.32
PTPN11-202ENST00000392597 UHRF1BP1LA0JNW5 1464 aa29.53■■■□□ 2.32
PTPN11-202ENST00000392597 HFM1A2PYH4 1435 aa29.52■■■□□ 2.32
PTPN11-202ENST00000392597 PTPRKQ15262 1439 aa29.51■■■□□ 2.31
PTPN11-202ENST00000392597 TROQ12816 1431 aaPredicted RBP29.5■■■□□ 2.31
PTPN11-202ENST00000392597 ARID3CA6NKF2 412 aa29.49■■■□□ 2.31
PTPN11-202ENST00000392597 ADCY10Q96PN6 1610 aa29.48■■■□□ 2.31
PTPN11-202ENST00000392597 MAPKBP1O60336 1514 aa29.48■■■□□ 2.31
PTPN11-202ENST00000392597 AKNAQ7Z591 1439 aa29.42■■■□□ 2.3
PTPN11-202ENST00000392597 ZNF316A6NFI3 1004 aaPredicted RBP29.41■■■□□ 2.3
PTPN11-202ENST00000392597 NAIPQ13075 1403 aa29.4■■■□□ 2.3
PTPN11-202ENST00000392597 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.29
PTPN11-202ENST00000392597 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
PTPN11-202ENST00000392597 ATP10BO94823 1461 aa29.35■■■□□ 2.29
PTPN11-202ENST00000392597 GCC2Q8IWJ2 1684 aa29.35■■■□□ 2.29
PTPN11-202ENST00000392597 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
PTPN11-202ENST00000392597 DNMT1P26358 1616 aaKnown RBP29.31■■■□□ 2.28
PTPN11-202ENST00000392597 KIF14Q15058 1648 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms