RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
GGPS1-203ENST00000391855 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
GGPS1-203ENST00000391855 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
GGPS1-203ENST00000391855 KIAA0586Q9BVV6 1533 aa21.46■■□□□ 1.03
GGPS1-203ENST00000391855 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
GGPS1-203ENST00000391855 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
GGPS1-203ENST00000391855 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
GGPS1-203ENST00000391855 PRG4Q92954 1404 aaPredicted RBP21.41■■□□□ 1.02
GGPS1-203ENST00000391855 EEA1Q15075 1411 aa21.34■■□□□ 1.01
GGPS1-203ENST00000391855 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
GGPS1-203ENST00000391855 PRXQ9BXM0 1461 aa21.32■■□□□ 1
GGPS1-203ENST00000391855 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
GGPS1-203ENST00000391855 CTTNBP2Q8WZ74 1663 aa21.24■□□□□ 0.99
GGPS1-203ENST00000391855 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
GGPS1-203ENST00000391855 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
GGPS1-203ENST00000391855 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
GGPS1-203ENST00000391855 DISP1Q96F81 1524 aa21.16■□□□□ 0.98
GGPS1-203ENST00000391855 PTPRGP23470 1445 aa21.15■□□□□ 0.98
GGPS1-203ENST00000391855 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
GGPS1-203ENST00000391855 KIAA0556O60303 1618 aa21.13■□□□□ 0.97
GGPS1-203ENST00000391855 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
GGPS1-203ENST00000391855 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
GGPS1-203ENST00000391855 KIF21BO75037 1637 aa21.1■□□□□ 0.97
GGPS1-203ENST00000391855 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
GGPS1-203ENST00000391855 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
GGPS1-203ENST00000391855 UHRF1BP1LA0JNW5 1464 aa21.04■□□□□ 0.96
GGPS1-203ENST00000391855 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
GGPS1-203ENST00000391855 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
GGPS1-203ENST00000391855 ABCC2Q92887 1545 aa21.01■□□□□ 0.95
GGPS1-203ENST00000391855 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
GGPS1-203ENST00000391855 SAMD9Q5K651 1589 aa20.96■□□□□ 0.95
GGPS1-203ENST00000391855 ABCC10Q5T3U5 1492 aa20.94■□□□□ 0.94
GGPS1-203ENST00000391855 KDM5BQ9UGL1 1544 aa20.92■□□□□ 0.94
GGPS1-203ENST00000391855 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
GGPS1-203ENST00000391855 DIP2BQ9P265 1576 aa20.9■□□□□ 0.94
GGPS1-203ENST00000391855 ABCA8O94911 1581 aa20.9■□□□□ 0.94
GGPS1-203ENST00000391855 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.93
GGPS1-203ENST00000391855 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
GGPS1-203ENST00000391855 ZCCHC11Q5TAX3 1644 aaKnown RBP20.86■□□□□ 0.93
GGPS1-203ENST00000391855 ASXL2Q76L83 1435 aa20.85■□□□□ 0.93
GGPS1-203ENST00000391855 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.93
GGPS1-203ENST00000391855 FAM69CQ0P6D2 419 aa20.83■□□□□ 0.93
GGPS1-203ENST00000391855 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
GGPS1-203ENST00000391855 GLI2P10070 1586 aa20.8■□□□□ 0.92
GGPS1-203ENST00000391855 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.92
GGPS1-203ENST00000391855 RAPGEF6Q8TEU7 1601 aa20.77■□□□□ 0.92
GGPS1-203ENST00000391855 WDR7Q9Y4E6 1490 aa20.76■□□□□ 0.91
GGPS1-203ENST00000391855 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
GGPS1-203ENST00000391855 EPRSP07814 1512 aaKnown RBP20.74■□□□□ 0.91
GGPS1-203ENST00000391855 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
GGPS1-203ENST00000391855 ATP10BO94823 1461 aa20.69■□□□□ 0.9
GGPS1-203ENST00000391855 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
GGPS1-203ENST00000391855 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
GGPS1-203ENST00000391855 NUP153P49790 1475 aaKnown RBP20.67■□□□□ 0.9
GGPS1-203ENST00000391855 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
GGPS1-203ENST00000391855 TSPOAP1O95153 1857 aa20.65■□□□□ 0.9
GGPS1-203ENST00000391855 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
GGPS1-203ENST00000391855 TEX14Q8IWB6 1497 aa20.62■□□□□ 0.89
GGPS1-203ENST00000391855 PPRC1Q5VV67 1664 aaKnown RBP20.62■□□□□ 0.89
GGPS1-203ENST00000391855 KDM6BO15054 1643 aa20.6■□□□□ 0.89
GGPS1-203ENST00000391855 FOXD1Q16676 465 aa20.6■□□□□ 0.89
GGPS1-203ENST00000391855 HECW1Q76N89 1606 aa20.59■□□□□ 0.89
GGPS1-203ENST00000391855 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
GGPS1-203ENST00000391855 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
GGPS1-203ENST00000391855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
GGPS1-203ENST00000391855 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
GGPS1-203ENST00000391855 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
GGPS1-203ENST00000391855 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
GGPS1-203ENST00000391855 CD109Q6YHK3 1445 aa20.55■□□□□ 0.88
GGPS1-203ENST00000391855 CLIP1P30622 1438 aa20.54■□□□□ 0.88
GGPS1-203ENST00000391855 ABCA9Q8IUA7 1624 aa20.53■□□□□ 0.88
GGPS1-203ENST00000391855 PLEKHD1A6NEE1 506 aa20.52■□□□□ 0.87
GGPS1-203ENST00000391855 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
GGPS1-203ENST00000391855 CASKIN1Q8WXD9 1431 aa20.48■□□□□ 0.87
GGPS1-203ENST00000391855 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
GGPS1-203ENST00000391855 CDK11AQ9UQ88 783 aaPredicted RBP20.45■□□□□ 0.86
GGPS1-203ENST00000391855 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
GGPS1-203ENST00000391855 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
GGPS1-203ENST00000391855 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
GGPS1-203ENST00000391855 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
GGPS1-203ENST00000391855 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
GGPS1-203ENST00000391855 NEO1Q92859 1461 aa20.4■□□□□ 0.86
GGPS1-203ENST00000391855 COL17A1Q9UMD9 1497 aaPredicted RBP20.4■□□□□ 0.86
GGPS1-203ENST00000391855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.39■□□□□ 0.85
GGPS1-203ENST00000391855 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
GGPS1-203ENST00000391855 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
GGPS1-203ENST00000391855 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
GGPS1-203ENST00000391855 TTC37Q6PGP7 1564 aa20.36■□□□□ 0.85
GGPS1-203ENST00000391855 CFAP74Q9C0B2 1584 aa20.36■□□□□ 0.85
GGPS1-203ENST00000391855 KIF14Q15058 1648 aa20.36■□□□□ 0.85
GGPS1-203ENST00000391855 FANCAO15360 1455 aa20.29■□□□□ 0.84
GGPS1-203ENST00000391855 PLCH2O75038 1416 aa20.29■□□□□ 0.84
GGPS1-203ENST00000391855 MYO5CQ9NQX4 1742 aa20.28■□□□□ 0.84
GGPS1-203ENST00000391855 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.83
GGPS1-203ENST00000391855 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
GGPS1-203ENST00000391855 DENND4BO75064 1496 aaPredicted RBP20.23■□□□□ 0.83
GGPS1-203ENST00000391855 FRMPD1Q5SYB0 1578 aa20.21■□□□□ 0.83
GGPS1-203ENST00000391855 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
GGPS1-203ENST00000391855 EFCAB2Q5VUJ9 269 aa20.2■□□□□ 0.82
GGPS1-203ENST00000391855 ADGRL1O94910 1474 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms