RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 CARMIL1Q5VZK9 1371 aa12.14□□□□□ -0.47
RNU1-56P-201ENST00000391303 CUL7Q14999 1698 aa12.11□□□□□ -0.47
RNU1-56P-201ENST00000391303 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
RNU1-56P-201ENST00000391303 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
RNU1-56P-201ENST00000391303 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
RNU1-56P-201ENST00000391303 CARMIL2Q6F5E8 1435 aa12.06□□□□□ -0.48
RNU1-56P-201ENST00000391303 RAPGEF2Q9Y4G8 1499 aa12.03□□□□□ -0.48
RNU1-56P-201ENST00000391303 PTPRGP23470 1445 aa12.03□□□□□ -0.48
RNU1-56P-201ENST00000391303 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
RNU1-56P-201ENST00000391303 MAPKBP1O60336 1514 aa12.01□□□□□ -0.49
RNU1-56P-201ENST00000391303 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
RNU1-56P-201ENST00000391303 IQGAP2Q13576 1575 aa11.97□□□□□ -0.49
RNU1-56P-201ENST00000391303 UHRF1BP1LA0JNW5 1464 aa11.96□□□□□ -0.49
RNU1-56P-201ENST00000391303 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
RNU1-56P-201ENST00000391303 FAM69CQ0P6D2 419 aa11.95□□□□□ -0.5
RNU1-56P-201ENST00000391303 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
RNU1-56P-201ENST00000391303 PRXQ9BXM0 1461 aa11.94□□□□□ -0.5
RNU1-56P-201ENST00000391303 DISP1Q96F81 1524 aa11.93□□□□□ -0.5
RNU1-56P-201ENST00000391303 UACAQ9BZF9 1416 aa11.93□□□□□ -0.5
RNU1-56P-201ENST00000391303 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
RNU1-56P-201ENST00000391303 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
RNU1-56P-201ENST00000391303 PLB1Q6P1J6 1458 aa11.91□□□□□ -0.5
RNU1-56P-201ENST00000391303 EEA1Q15075 1411 aa11.91□□□□□ -0.5
RNU1-56P-201ENST00000391303 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
RNU1-56P-201ENST00000391303 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
RNU1-56P-201ENST00000391303 KDM5BQ9UGL1 1544 aa11.87□□□□□ -0.51
RNU1-56P-201ENST00000391303 DIP2BQ9P265 1576 aa11.87□□□□□ -0.51
RNU1-56P-201ENST00000391303 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
RNU1-56P-201ENST00000391303 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
RNU1-56P-201ENST00000391303 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
RNU1-56P-201ENST00000391303 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
RNU1-56P-201ENST00000391303 GLI2P10070 1586 aa11.83□□□□□ -0.52
RNU1-56P-201ENST00000391303 KIF13AQ9H1H9 1805 aa11.79□□□□□ -0.52
RNU1-56P-201ENST00000391303 EPRSP07814 1512 aaKnown RBP11.79□□□□□ -0.52
RNU1-56P-201ENST00000391303 TEX14Q8IWB6 1497 aa11.77□□□□□ -0.52
RNU1-56P-201ENST00000391303 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.52
RNU1-56P-201ENST00000391303 ABCA8O94911 1581 aa11.75□□□□□ -0.53
RNU1-56P-201ENST00000391303 KDM6BO15054 1643 aa11.74□□□□□ -0.53
RNU1-56P-201ENST00000391303 CTTNBP2Q8WZ74 1663 aa11.73□□□□□ -0.53
RNU1-56P-201ENST00000391303 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.53
RNU1-56P-201ENST00000391303 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.53
RNU1-56P-201ENST00000391303 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.54
RNU1-56P-201ENST00000391303 CD109Q6YHK3 1445 aa11.7□□□□□ -0.54
RNU1-56P-201ENST00000391303 ATP10BO94823 1461 aa11.69□□□□□ -0.54
RNU1-56P-201ENST00000391303 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
RNU1-56P-201ENST00000391303 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
RNU1-56P-201ENST00000391303 CHIC1Q5VXU3 224 aa11.68□□□□□ -0.54
RNU1-56P-201ENST00000391303 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
RNU1-56P-201ENST00000391303 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
RNU1-56P-201ENST00000391303 EFCAB5A4FU69 1503 aa11.66□□□□□ -0.54
RNU1-56P-201ENST00000391303 KIF21BO75037 1637 aa11.66□□□□□ -0.54
RNU1-56P-201ENST00000391303 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
RNU1-56P-201ENST00000391303 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
RNU1-56P-201ENST00000391303 PLEKHD1A6NEE1 506 aa11.63□□□□□ -0.55
RNU1-56P-201ENST00000391303 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
RNU1-56P-201ENST00000391303 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
RNU1-56P-201ENST00000391303 FHOD3Q2V2M9 1422 aa11.61□□□□□ -0.55
RNU1-56P-201ENST00000391303 ARAP3Q8WWN8 1544 aa11.61□□□□□ -0.55
RNU1-56P-201ENST00000391303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
RNU1-56P-201ENST00000391303 UBTFP17480 764 aaKnown RBP11.61□□□□□ -0.55
RNU1-56P-201ENST00000391303 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
RNU1-56P-201ENST00000391303 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
RNU1-56P-201ENST00000391303 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
RNU1-56P-201ENST00000391303 NEO1Q92859 1461 aa11.6□□□□□ -0.55
RNU1-56P-201ENST00000391303 RAPGEF6Q8TEU7 1601 aa11.6□□□□□ -0.55
RNU1-56P-201ENST00000391303 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
RNU1-56P-201ENST00000391303 CDK11AQ9UQ88 783 aaPredicted RBP11.57□□□□□ -0.56
RNU1-56P-201ENST00000391303 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
RNU1-56P-201ENST00000391303 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
RNU1-56P-201ENST00000391303 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
RNU1-56P-201ENST00000391303 ADGRL1O94910 1474 aa11.54□□□□□ -0.56
RNU1-56P-201ENST00000391303 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
RNU1-56P-201ENST00000391303 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
RNU1-56P-201ENST00000391303 PLCH2O75038 1416 aa11.49□□□□□ -0.57
RNU1-56P-201ENST00000391303 AKNAQ7Z591 1439 aa11.49□□□□□ -0.57
RNU1-56P-201ENST00000391303 FANCAO15360 1455 aa11.49□□□□□ -0.57
RNU1-56P-201ENST00000391303 DENND4BO75064 1496 aaPredicted RBP11.49□□□□□ -0.57
RNU1-56P-201ENST00000391303 MAGI2Q86UL8 1455 aa11.47□□□□□ -0.57
RNU1-56P-201ENST00000391303 EFCAB2Q5VUJ9 269 aa11.47□□□□□ -0.57
RNU1-56P-201ENST00000391303 HECW1Q76N89 1606 aa11.46□□□□□ -0.57
RNU1-56P-201ENST00000391303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNU1-56P-201ENST00000391303 CLIP1P30622 1438 aa11.46□□□□□ -0.57
RNU1-56P-201ENST00000391303 TROQ12816 1431 aaPredicted RBP11.46□□□□□ -0.57
RNU1-56P-201ENST00000391303 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
RNU1-56P-201ENST00000391303 ATP1B4Q9UN42 357 aaPredicted RBP11.45□□□□□ -0.58
RNU1-56P-201ENST00000391303 CFAP74Q9C0B2 1584 aa11.45□□□□□ -0.58
RNU1-56P-201ENST00000391303 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
RNU1-56P-201ENST00000391303 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
RNU1-56P-201ENST00000391303 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
RNU1-56P-201ENST00000391303 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
RNU1-56P-201ENST00000391303 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
RNU1-56P-201ENST00000391303 ZMYM4Q5VZL5 1548 aa11.41□□□□□ -0.58
RNU1-56P-201ENST00000391303 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
RNU1-56P-201ENST00000391303 FYCO1Q9BQS8 1478 aa11.39□□□□□ -0.59
RNU1-56P-201ENST00000391303 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
RNU1-56P-201ENST00000391303 TTC37Q6PGP7 1564 aa11.39□□□□□ -0.59
RNU1-56P-201ENST00000391303 ARHGEF40Q8TER5 1519 aa11.38□□□□□ -0.59
RNU1-56P-201ENST00000391303 KIF14Q15058 1648 aa11.38□□□□□ -0.59
RNU1-56P-201ENST00000391303 PTPRMP28827 1452 aa11.37□□□□□ -0.59
RNU1-56P-201ENST00000391303 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms