RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 WDR97A6NE52 1622 aa6.91□□□□□ -1.3
TRAJ4-201ENST00000390533 DEKP35659 375 aaKnown RBP6.91□□□□□ -1.3
TRAJ4-201ENST00000390533 DDX10Q13206 875 aaKnown RBP6.91□□□□□ -1.3
TRAJ4-201ENST00000390533 KANK4Q5T7N3 995 aaPredicted RBP6.91□□□□□ -1.3
TRAJ4-201ENST00000390533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAJ4-201ENST00000390533 BIVM-ERCC5R4GMW8 1640 aa6.9□□□□□ -1.3
TRAJ4-201ENST00000390533 ITGAEP38570 1179 aa6.87□□□□□ -1.31
TRAJ4-201ENST00000390533 NOP58Q9Y2X3 529 aaKnown RBP6.86□□□□□ -1.31
TRAJ4-201ENST00000390533 TRIM52Q96A61 297 aa6.85□□□□□ -1.31
TRAJ4-201ENST00000390533 TIAM1Q13009 1591 aa6.85□□□□□ -1.31
TRAJ4-201ENST00000390533 ARHGAP35Q9NRY4 1499 aa6.85□□□□□ -1.31
TRAJ4-201ENST00000390533 FHAD1B1AJZ9 1412 aa6.84□□□□□ -1.31
TRAJ4-201ENST00000390533 UNC13AQ9UPW8 1703 aa6.84□□□□□ -1.31
TRAJ4-201ENST00000390533 KIF27Q86VH2 1401 aa6.83□□□□□ -1.32
TRAJ4-201ENST00000390533 LRRC9Q6ZRR7 1453 aa6.82□□□□□ -1.32
TRAJ4-201ENST00000390533 WASHC2AQ641Q2 1341 aa6.81□□□□□ -1.32
TRAJ4-201ENST00000390533 ATAD2BQ9ULI0 1458 aa6.81□□□□□ -1.32
TRAJ4-201ENST00000390533 C11orf95C9JLR9 678 aaPredicted RBP6.81□□□□□ -1.32
TRAJ4-201ENST00000390533 USP35Q9P2H5 1018 aa6.81□□□□□ -1.32
TRAJ4-201ENST00000390533 ZBED9Q6R2W3 1325 aa6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 NCAPD3P42695 1498 aa6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 NCOA2Q15596 1464 aa6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 HNRNPUQ00839 825 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 IPO9Q96P70 1041 aaKnown RBP6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 SIN3AQ96ST3 1273 aa6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 CFAP43Q8NDM7 1665 aa6.8□□□□□ -1.32
TRAJ4-201ENST00000390533 RNF123Q5XPI4 1314 aa6.79□□□□□ -1.32
TRAJ4-201ENST00000390533 ANP32AP39687 249 aaKnown RBP6.79□□□□□ -1.32
TRAJ4-201ENST00000390533 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
TRAJ4-201ENST00000390533 UACAQ9BZF9 1416 aa6.78□□□□□ -1.32
TRAJ4-201ENST00000390533 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
TRAJ4-201ENST00000390533 PHLDB1Q86UU1 1377 aa6.78□□□□□ -1.32
TRAJ4-201ENST00000390533 TONSLQ96HA7 1378 aa6.78□□□□□ -1.32
TRAJ4-201ENST00000390533 UBE2Q2Q8WVN8 375 aa6.77□□□□□ -1.33
TRAJ4-201ENST00000390533 AQRO60306 1485 aaKnown RBP eCLIP6.77□□□□□ -1.33
TRAJ4-201ENST00000390533 WASHC2CQ9Y4E1 1318 aa6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 SMG6Q86US8 1419 aaKnown RBP6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 CNTLNQ9NXG0 1405 aa6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 KDM5BQ9UGL1 1544 aa6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 PAK3O75914 559 aaPredicted RBP6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 BICRAQ9NZM4 1560 aa6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 HFM1A2PYH4 1435 aa6.76□□□□□ -1.33
TRAJ4-201ENST00000390533 ZBTB47Q9UFB7 747 aaPredicted RBP6.75□□□□□ -1.33
TRAJ4-201ENST00000390533 CUX1P39880 1505 aa6.75□□□□□ -1.33
TRAJ4-201ENST00000390533 ABCA5Q8WWZ7 1642 aa6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 B4GALNT3Q6L9W6 998 aa6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 CCDC136Q96JN2 1154 aa6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 NCOA1Q15788 1441 aa6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 FYCO1Q9BQS8 1478 aa6.73□□□□□ -1.33
TRAJ4-201ENST00000390533 MS4A1P11836 297 aa6.72□□□□□ -1.33
TRAJ4-201ENST00000390533 RANGAP1P46060 587 aaPredicted RBP6.72□□□□□ -1.33
TRAJ4-201ENST00000390533 IRX6P78412 446 aaPredicted RBP6.72□□□□□ -1.33
TRAJ4-201ENST00000390533 NBR1Q14596 966 aa6.72□□□□□ -1.33
TRAJ4-201ENST00000390533 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
TRAJ4-201ENST00000390533 SALL2Q9Y467 1007 aaPredicted RBP6.72□□□□□ -1.33
TRAJ4-201ENST00000390533 EFCAB5A4FU69 1503 aa6.71□□□□□ -1.33
TRAJ4-201ENST00000390533 IGF1RP08069 1367 aa6.71□□□□□ -1.33
TRAJ4-201ENST00000390533 POLR1AO95602 1720 aaPredicted RBP6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 FGD6Q6ZV73 1430 aa6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 AKNAQ7Z591 1439 aa6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 CASKIN1Q8WXD9 1431 aa6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 EIF4G2P78344 907 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 FAM50AQ14320 339 aaKnown RBP6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 NUDCQ9Y266 331 aa6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 PTPN23Q9H3S7 1636 aa6.71□□□□□ -1.34
TRAJ4-201ENST00000390533 CCDC7Q96M83 1385 aa6.7□□□□□ -1.34
TRAJ4-201ENST00000390533 FMN1Q68DA7 1419 aa6.7□□□□□ -1.34
TRAJ4-201ENST00000390533 HSPA5P11021 654 aaKnown RBP6.7□□□□□ -1.34
TRAJ4-201ENST00000390533 FGD5Q6ZNL6 1462 aa6.7□□□□□ -1.34
TRAJ4-201ENST00000390533 HMGXB3Q12766 1538 aa6.7□□□□□ -1.34
TRAJ4-201ENST00000390533 CARMIL1Q5VZK9 1371 aa6.69□□□□□ -1.34
TRAJ4-201ENST00000390533 HIRIP3Q9BW71 556 aaPredicted RBP6.69□□□□□ -1.34
TRAJ4-201ENST00000390533 PCF11O94913 1555 aaKnown RBP6.69□□□□□ -1.34
TRAJ4-201ENST00000390533 NAIPQ13075 1403 aa6.68□□□□□ -1.34
TRAJ4-201ENST00000390533 CFTRP13569 1480 aa6.68□□□□□ -1.34
TRAJ4-201ENST00000390533 MRS2Q9HD23 443 aa6.68□□□□□ -1.34
TRAJ4-201ENST00000390533 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
TRAJ4-201ENST00000390533 DDRGK1Q96HY6 314 aa6.67□□□□□ -1.34
TRAJ4-201ENST00000390533 HECW1Q76N89 1606 aa6.67□□□□□ -1.34
TRAJ4-201ENST00000390533 ARID4BQ4LE39 1312 aaPredicted RBP6.67□□□□□ -1.34
TRAJ4-201ENST00000390533 PRDM2Q13029 1718 aa6.67□□□□□ -1.34
TRAJ4-201ENST00000390533 SPATA31E1Q6ZUB1 1445 aa6.67□□□□□ -1.34
TRAJ4-201ENST00000390533 THOC2Q8NI27 1593 aaKnown RBP6.66□□□□□ -1.34
TRAJ4-201ENST00000390533 RSPH6AQ9H0K4 717 aa6.66□□□□□ -1.34
TRAJ4-201ENST00000390533 CCDC184Q52MB2 194 aa6.65□□□□□ -1.34
TRAJ4-201ENST00000390533 BACH2Q9BYV9 841 aa6.65□□□□□ -1.34
TRAJ4-201ENST00000390533 PTPRKQ15262 1439 aa6.65□□□□□ -1.35
TRAJ4-201ENST00000390533 MYOM3Q5VTT5 1437 aa6.65□□□□□ -1.35
TRAJ4-201ENST00000390533 MIA2Q96PC5 1412 aa6.65□□□□□ -1.35
TRAJ4-201ENST00000390533 GCC2Q8IWJ2 1684 aa6.65□□□□□ -1.35
TRAJ4-201ENST00000390533 NEFMP07197 916 aa6.64□□□□□ -1.35
TRAJ4-201ENST00000390533 INSRP06213 1382 aa6.64□□□□□ -1.35
TRAJ4-201ENST00000390533 KTN1Q86UP2 1357 aaKnown RBP6.64□□□□□ -1.35
TRAJ4-201ENST00000390533 TCOF1Q13428 1488 aaKnown RBP6.64□□□□□ -1.35
TRAJ4-201ENST00000390533 ARHGEF11O15085 1522 aa6.63□□□□□ -1.35
TRAJ4-201ENST00000390533 PDE4AP27815 886 aa6.63□□□□□ -1.35
TRAJ4-201ENST00000390533 GSE1Q14687 1217 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms