RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 HS3ST6Q96QI5 342 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 KRTAP4-8Q9BYQ9 185 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 STK17AQ9UEE5 414 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 ZRANB1Q9UGI0 708 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 ATF5Q9Y2D1 282 aaPredicted RBP0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 BTBD11A6QL63 1104 aa0.66□□□□□ -2.3
TRAJ28-201ENST00000390509 ATMINO43313 823 aaPredicted RBP0.66□□□□□ -2.3
TRAJ28-201ENST00000390509 XP32Q5T750 250 aa0.66□□□□□ -2.3
TRAJ28-201ENST00000390509 FARP1Q9Y4F1 1045 aaPredicted RBP0.66□□□□□ -2.3
TRAJ28-201ENST00000390509 KRTAP4-8A0A0G2JLE6 195 aa0.65□□□□□ -2.31
TRAJ28-201ENST00000390509 FAM205CA6NFA0 338 aa0.65□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.65□□□□□ -2.31
TRAJ28-201ENST00000390509 PAK3O75914 559 aaPredicted RBP0.65□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP9-2Q9BYQ4 174 aa0.65□□□□□ -2.31
TRAJ28-201ENST00000390509 ANO8Q9HCE9 1232 aaPredicted RBP0.65□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP9-6A0A140TA67 174 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 POTEB3A0JP26 581 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 SPDYE2BA6NHP3 402 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 SEC24BO95487 1268 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 PRR29P0C7W0 189 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 SPDYE6P0CI01 402 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 LAPTM4AQ15012 233 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 SPDYE2Q495Y8 402 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 LCE3BQ5TA77 95 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 POTEBQ6S5H4 581 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 ZNF775Q96BV0 537 aaPredicted RBP0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 PSMG3-AS1Q96PY0 264 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 PHF12Q96QT6 1004 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP17-1Q9BYP8 105 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 HCSTQ9UBK5 93 aa0.64□□□□□ -2.31
TRAJ28-201ENST00000390509 POTEFA5A3E0 1075 aa0.63□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP5-3Q6L8H2 238 aa0.63□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP4-7Q9BYR0 210 aa0.63□□□□□ -2.31
TRAJ28-201ENST00000390509 ATN1P54259 1190 aaPredicted RBP0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 IER5LQ5T953 404 aa0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 ZNF787Q6DD87 383 aa0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 TRAF7Q6Q0C0 670 aa0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 MS4A3Q96HJ5 214 aa0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP9-8Q9BYQ0 159 aa0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 COLQQ9Y215 455 aaPredicted RBP0.62□□□□□ -2.31
TRAJ28-201ENST00000390509 A0A0G2JS52 829 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 LCE2BO14633 110 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 INSM1Q01101 510 aaPredicted RBP0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 NCBP3Q53F19 620 aaKnown RBP0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 IFFO2Q5TF58 517 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 TREML4Q6UXN2 200 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP9-9Q9BYP9 154 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP9-4Q9BYQ2 154 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 EIF2AK3Q9NZJ5 1116 aaKnown RBP0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 ERBB3P21860 1342 aa0.61□□□□□ -2.31
TRAJ28-201ENST00000390509 FAM181BA6NEQ2 426 aa0.6□□□□□ -2.31
TRAJ28-201ENST00000390509 PLCG2P16885 1265 aa0.6□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP4-2Q9BYR5 136 aa0.6□□□□□ -2.31
TRAJ28-201ENST00000390509 BMP2KQ9NSY1 1161 aaPredicted RBP0.6□□□□□ -2.31
TRAJ28-201ENST00000390509 NRG2O14511 850 aaPredicted RBP0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 TIE1P35590 1138 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 VARS2Q5ST30 1063 aaKnown RBP0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 LCE1DQ5T752 114 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 ANKRD13DQ6ZTN6 518 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 C3orf67Q6ZVT6 689 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 ZNF687Q8N1G0 1237 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP4-12Q9BQ66 201 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 KRTAP4-9Q9BYQ8 210 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 SSUH2Q9Y2M2 353 aa0.59□□□□□ -2.31
TRAJ28-201ENST00000390509 WIPF1O43516 503 aa0.58□□□□□ -2.32
TRAJ28-201ENST00000390509 GFRA3O60609 400 aa0.58□□□□□ -2.32
TRAJ28-201ENST00000390509 SLC4A2P04920 1241 aa0.58□□□□□ -2.32
TRAJ28-201ENST00000390509 HOXB1P14653 301 aaPredicted RBP0.58□□□□□ -2.32
TRAJ28-201ENST00000390509 LSM11P83369 360 aaKnown RBP eCLIP0.58□□□□□ -2.32
TRAJ28-201ENST00000390509 LCE2AQ5TA79 106 aaPredicted RBP0.58□□□□□ -2.32
TRAJ28-201ENST00000390509 TTLL13PA6NNM8 815 aa0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 WFS1O76024 890 aa0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 NPM1P06748 294 aaKnown RBP eCLIP0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 FBLN2P98095 1184 aa0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 ZNF710Q8N1W2 664 aa0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 ZNF692Q9BU19 519 aaPredicted RBP0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 TRIM35Q9UPQ4 493 aa0.57□□□□□ -2.32
TRAJ28-201ENST00000390509 RIMBP2O15034 1052 aa0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 NPM3O75607 178 aaKnown RBP0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 MYCNP04198 464 aaPredicted RBP0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 LORP23490 312 aaPredicted RBP0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 PBX2P40425 430 aa0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 DOK7Q18PE1 504 aa0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 PABPN1Q86U42 306 aaKnown RBP eCLIP0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 KCTD17Q8N5Z5 321 aa0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 KRTAP4-5Q9BYR2 181 aa0.56□□□□□ -2.32
TRAJ28-201ENST00000390509 HOXB3P14651 431 aaPredicted RBP0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 IRX5P78411 483 aaPredicted RBP0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 LAMC2Q13753 1193 aa0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 KRTAP4-11Q9BYQ6 195 aa0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 OCEL1Q9H607 264 aa0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 GOLGA2P5Q9HBQ8 144 aa0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 CREBZFQ9NS37 354 aa0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 TRPC6Q9Y210 931 aa0.55□□□□□ -2.32
TRAJ28-201ENST00000390509 COBLO75128 1261 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 IGHA1P01876 353 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 KRTAP19-1Q8IUB9 90 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 Q8N3U1 123 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 TMEM151AQ8N4L1 468 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 ZSCAN1Q8NBB4 408 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms