RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CHIC1Q5VXU3 224 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP5-3Q6L8H2 238 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEEQ6S8J3 1075 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP5-2Q701N4 177 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 PELP1Q8IZL8 1130 aaKnown RBP0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 OTUD5Q96G74 571 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-2Q9BYQ4 174 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP3-3Q9BYR6 98 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP3-2Q9BYR7 98 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 RNF39Q9H2S5 420 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAJC5BQ9UF47 199 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 DMRT2Q9Y5R5 561 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 OBSCNQ5VST9 7968 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 MUC17Q685J3 4493 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH2Q9P225 4427 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 PRKDCP78527 4128 aaKnown RBP0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 ALMS1Q8TCU4 4167 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 PKD1P98161 4303 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 ANK2Q01484 3957 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 VPS13BQ7Z7G8 4022 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 PKHD1L1Q86WI1 4243 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 AKAP9Q99996 3911 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 HECTD4Q9Y4D8 3996 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-8A0A0G2JLE6 195 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEMA6NI47 508 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 C19orf67A6NJJ6 358 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-7A8MTY7 169 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 GABBR2O75899 941 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 ITGB2P05107 769 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 DSG3P32926 999 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 MNX1P50219 401 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 FXR2P51116 673 aaKnown RBP eCLIP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 C1QBPQ07021 282 aaKnown RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 MKRN4PQ13434 485 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 LCE1DQ5T752 114 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 LCE4AQ5TA78 99 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 LHX8Q68G74 356 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP5-11Q6L8G4 156 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP5-4Q6L8H1 288 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP5-1Q6L8H4 278 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 ILDR2Q71H61 639 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 ILDR1Q86SU0 546 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP19-1Q8IUB9 90 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP1-3Q8IUG1 177 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 SPNS2Q8IVW8 549 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 PIP4P2Q8N4L2 257 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 SP7Q8TDD2 431 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-12Q9BQ66 201 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-8Q9BYQ0 159 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-3Q9BYQ3 159 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-9Q9BYQ8 210 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-8Q9BYQ9 185 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-7Q9BYR0 210 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-5Q9BYR2 181 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-2Q9BYR5 136 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 SENP3Q9H4L4 574 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 SPINK5Q9NQ38 1064 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 TRPC6Q9Y210 931 aa0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 ATF5Q9Y2D1 282 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 U3KPZ7 1027 aaPredicted RBP0.03□□□□□ -2.4
TRAJ54-201ENST00000390484 ZNF469Q96JG9 3925 aaPredicted RBP0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 BSNQ9UPA5 3926 aa0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MUC19Q7Z5P9 8384 aa0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 POTECB2RU33 542 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 C3orf80F5H4A9 247 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 RBAK-RBAKDNI3L0D1 243 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PITPNM1O00562 1244 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ZBTB22O15209 634 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MSH5O43196 834 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ATMINO43313 823 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 HRO43593 1189 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 GALR2O43603 387 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ST18O60284 1047 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 NPM3O75607 178 aaKnown RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ITGBL1O95965 494 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 HOXB3P14651 431 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ITGB7P26010 798 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP5-9P26371 169 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PRIM1P49642 420 aaKnown RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CACNB1Q02641 598 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MMRN1Q13201 1228 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXD4L6Q3SYB3 417 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 LCE1AQ5T7P2 110 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 LCE5AQ5TCM9 118 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP5-7Q6L8G8 165 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 DPY19L2Q6NUT2 758 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 GPR153Q6NV75 609 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 POTEGQ6S5H5 508 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TMEM92Q6UXU6 159 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXD4L3Q6VB84 417 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CHRDL2Q6WN34 429 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PPP4R3CPQ6ZMV5 832 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TRIM67Q6ZTA4 783 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP5-5Q701N2 237 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CILP2Q8IUL8 1156 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CDAN1Q8IWY9 1227 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 REM2Q8IYK8 340 aaPredicted RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms