RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 IGF1RP08069 1367 aa18.66■□□□□ 0.58
TRAV4-201ENST00000390426 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
TRAV4-201ENST00000390426 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
TRAV4-201ENST00000390426 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
TRAV4-201ENST00000390426 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
TRAV4-201ENST00000390426 CUL7Q14999 1698 aa18.54■□□□□ 0.56
TRAV4-201ENST00000390426 NPM1P06748 294 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRAV4-201ENST00000390426 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
TRAV4-201ENST00000390426 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
TRAV4-201ENST00000390426 ADCY10Q96PN6 1610 aa18.41■□□□□ 0.54
TRAV4-201ENST00000390426 PTPRGP23470 1445 aa18.4■□□□□ 0.54
TRAV4-201ENST00000390426 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.53
TRAV4-201ENST00000390426 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
TRAV4-201ENST00000390426 CARMIL2Q6F5E8 1435 aa18.37■□□□□ 0.53
TRAV4-201ENST00000390426 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
TRAV4-201ENST00000390426 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
TRAV4-201ENST00000390426 IQGAP2Q13576 1575 aa18.35■□□□□ 0.53
TRAV4-201ENST00000390426 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
TRAV4-201ENST00000390426 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
TRAV4-201ENST00000390426 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
TRAV4-201ENST00000390426 ABCC2Q92887 1545 aa18.26■□□□□ 0.51
TRAV4-201ENST00000390426 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
TRAV4-201ENST00000390426 UGGT2Q9NYU1 1516 aa18.24■□□□□ 0.51
TRAV4-201ENST00000390426 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
TRAV4-201ENST00000390426 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
TRAV4-201ENST00000390426 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
TRAV4-201ENST00000390426 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
TRAV4-201ENST00000390426 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
TRAV4-201ENST00000390426 PRXQ9BXM0 1461 aa18.16■□□□□ 0.5
TRAV4-201ENST00000390426 KDM5BQ9UGL1 1544 aa18.14■□□□□ 0.49
TRAV4-201ENST00000390426 KDM6BO15054 1643 aa18.14■□□□□ 0.49
TRAV4-201ENST00000390426 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
TRAV4-201ENST00000390426 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
TRAV4-201ENST00000390426 GLI2P10070 1586 aa18.11■□□□□ 0.49
TRAV4-201ENST00000390426 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
TRAV4-201ENST00000390426 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
TRAV4-201ENST00000390426 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
TRAV4-201ENST00000390426 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
TRAV4-201ENST00000390426 PPRC1Q5VV67 1664 aaKnown RBP18.05■□□□□ 0.48
TRAV4-201ENST00000390426 ABCA8O94911 1581 aa18.03■□□□□ 0.48
TRAV4-201ENST00000390426 WDR7Q9Y4E6 1490 aa18.02■□□□□ 0.48
TRAV4-201ENST00000390426 KCNH8Q96L42 1107 aa18.02■□□□□ 0.48
TRAV4-201ENST00000390426 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
TRAV4-201ENST00000390426 ARID3CA6NKF2 412 aa18■□□□□ 0.47
TRAV4-201ENST00000390426 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
TRAV4-201ENST00000390426 MAP3K4Q9Y6R4 1608 aa18■□□□□ 0.47
TRAV4-201ENST00000390426 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
TRAV4-201ENST00000390426 TEX14Q8IWB6 1497 aa17.97■□□□□ 0.47
TRAV4-201ENST00000390426 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
TRAV4-201ENST00000390426 EEA1Q15075 1411 aa17.96■□□□□ 0.47
TRAV4-201ENST00000390426 CD109Q6YHK3 1445 aa17.94■□□□□ 0.46
TRAV4-201ENST00000390426 ATP10BO94823 1461 aa17.92■□□□□ 0.46
TRAV4-201ENST00000390426 SAMD9Q5K651 1589 aa17.89■□□□□ 0.45
TRAV4-201ENST00000390426 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
TRAV4-201ENST00000390426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
TRAV4-201ENST00000390426 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
TRAV4-201ENST00000390426 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
TRAV4-201ENST00000390426 FHOD3Q2V2M9 1422 aa17.85■□□□□ 0.45
TRAV4-201ENST00000390426 ADGRL1O94910 1474 aa17.84■□□□□ 0.45
TRAV4-201ENST00000390426 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
TRAV4-201ENST00000390426 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.45
TRAV4-201ENST00000390426 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
TRAV4-201ENST00000390426 KIF21BO75037 1637 aa17.79■□□□□ 0.44
TRAV4-201ENST00000390426 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
TRAV4-201ENST00000390426 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
TRAV4-201ENST00000390426 ABCA9Q8IUA7 1624 aa17.75■□□□□ 0.43
TRAV4-201ENST00000390426 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
TRAV4-201ENST00000390426 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
TRAV4-201ENST00000390426 RAPGEF3O95398 923 aa17.72■□□□□ 0.43
TRAV4-201ENST00000390426 PHLDB1Q86UU1 1377 aa17.71■□□□□ 0.43
TRAV4-201ENST00000390426 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
TRAV4-201ENST00000390426 NEO1Q92859 1461 aa17.68■□□□□ 0.42
TRAV4-201ENST00000390426 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
TRAV4-201ENST00000390426 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
TRAV4-201ENST00000390426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRAV4-201ENST00000390426 FMN1Q68DA7 1419 aa17.6■□□□□ 0.41
TRAV4-201ENST00000390426 AKNAQ7Z591 1439 aa17.6■□□□□ 0.41
TRAV4-201ENST00000390426 FRMPD1Q5SYB0 1578 aa17.59■□□□□ 0.41
TRAV4-201ENST00000390426 FANCAO15360 1455 aa17.58■□□□□ 0.41
TRAV4-201ENST00000390426 DENND4BO75064 1496 aaPredicted RBP17.58■□□□□ 0.41
TRAV4-201ENST00000390426 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
TRAV4-201ENST00000390426 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
TRAV4-201ENST00000390426 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
TRAV4-201ENST00000390426 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
TRAV4-201ENST00000390426 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
TRAV4-201ENST00000390426 PLCH2O75038 1416 aa17.53■□□□□ 0.4
TRAV4-201ENST00000390426 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.39
TRAV4-201ENST00000390426 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
TRAV4-201ENST00000390426 ADAMTSL3P82987 1691 aa17.5■□□□□ 0.39
TRAV4-201ENST00000390426 PTPRMP28827 1452 aa17.5■□□□□ 0.39
TRAV4-201ENST00000390426 SCAPERQ9BY12 1400 aa17.49■□□□□ 0.39
TRAV4-201ENST00000390426 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
TRAV4-201ENST00000390426 ARHGEF40Q8TER5 1519 aa17.48■□□□□ 0.39
TRAV4-201ENST00000390426 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
TRAV4-201ENST00000390426 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
TRAV4-201ENST00000390426 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
TRAV4-201ENST00000390426 KIF14Q15058 1648 aa17.45■□□□□ 0.38
TRAV4-201ENST00000390426 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
TRAV4-201ENST00000390426 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
TRAV4-201ENST00000390426 CLIP1P30622 1438 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms