RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 EEA1Q15075 1411 aa27.16■■□□□ 1.94
MRPL28-202ENST00000389675 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
MRPL28-202ENST00000389675 FAM9AQ8IZU1 332 aaPredicted RBP27.11■■□□□ 1.93
MRPL28-202ENST00000389675 CSRNP3Q8WYN3 585 aa27.1■■□□□ 1.93
MRPL28-202ENST00000389675 KIAA0586Q9BVV6 1533 aa27.03■■□□□ 1.92
MRPL28-202ENST00000389675 PRXQ9BXM0 1461 aa27.03■■□□□ 1.92
MRPL28-202ENST00000389675 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
MRPL28-202ENST00000389675 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
MRPL28-202ENST00000389675 PRG4Q92954 1404 aaPredicted RBP26.93■■□□□ 1.9
MRPL28-202ENST00000389675 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
MRPL28-202ENST00000389675 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
MRPL28-202ENST00000389675 ERCC6L2Q5T890 1561 aa26.89■■□□□ 1.9
MRPL28-202ENST00000389675 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
MRPL28-202ENST00000389675 KIF21BO75037 1637 aa26.83■■□□□ 1.89
MRPL28-202ENST00000389675 CARMIL2Q6F5E8 1435 aa26.79■■□□□ 1.88
MRPL28-202ENST00000389675 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
MRPL28-202ENST00000389675 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
MRPL28-202ENST00000389675 UGGT2Q9NYU1 1516 aa26.74■■□□□ 1.87
MRPL28-202ENST00000389675 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
MRPL28-202ENST00000389675 UBTFP17480 764 aaKnown RBP26.7■■□□□ 1.86
MRPL28-202ENST00000389675 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
MRPL28-202ENST00000389675 DISP1Q96F81 1524 aa26.68■■□□□ 1.86
MRPL28-202ENST00000389675 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
MRPL28-202ENST00000389675 KIAA0556O60303 1618 aa26.64■■□□□ 1.85
MRPL28-202ENST00000389675 PTPRGP23470 1445 aa26.64■■□□□ 1.85
MRPL28-202ENST00000389675 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
MRPL28-202ENST00000389675 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
MRPL28-202ENST00000389675 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
MRPL28-202ENST00000389675 NPM1P06748 294 aaKnown RBP eCLIP26.48■■□□□ 1.83
MRPL28-202ENST00000389675 ADCY10Q96PN6 1610 aa26.47■■□□□ 1.83
MRPL28-202ENST00000389675 UACAQ9BZF9 1416 aa26.45■■□□□ 1.82
MRPL28-202ENST00000389675 EFCAB5A4FU69 1503 aa26.44■■□□□ 1.82
MRPL28-202ENST00000389675 FHOD3Q2V2M9 1422 aa26.39■■□□□ 1.82
MRPL28-202ENST00000389675 ABCC2Q92887 1545 aa26.39■■□□□ 1.82
MRPL28-202ENST00000389675 MAPKBP1O60336 1514 aa26.39■■□□□ 1.81
MRPL28-202ENST00000389675 UHRF1BP1LA0JNW5 1464 aa26.38■■□□□ 1.81
MRPL28-202ENST00000389675 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
MRPL28-202ENST00000389675 ABCC10Q5T3U5 1492 aa26.37■■□□□ 1.81
MRPL28-202ENST00000389675 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
MRPL28-202ENST00000389675 ABCA8O94911 1581 aa26.32■■□□□ 1.8
MRPL28-202ENST00000389675 ARHGAP35Q9NRY4 1499 aa26.31■■□□□ 1.8
MRPL28-202ENST00000389675 TSPOAP1O95153 1857 aa26.29■■□□□ 1.8
MRPL28-202ENST00000389675 LOC105371045A0A1W2PR82 267 aa26.28■■□□□ 1.8
MRPL28-202ENST00000389675 KDM6BO15054 1643 aa26.27■■□□□ 1.8
MRPL28-202ENST00000389675 CLIP1P30622 1438 aa26.26■■□□□ 1.79
MRPL28-202ENST00000389675 FAM69CQ0P6D2 419 aa26.26■■□□□ 1.79
MRPL28-202ENST00000389675 KDM5BQ9UGL1 1544 aa26.25■■□□□ 1.79
MRPL28-202ENST00000389675 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
MRPL28-202ENST00000389675 ZCCHC11Q5TAX3 1644 aaKnown RBP26.22■■□□□ 1.79
MRPL28-202ENST00000389675 FMN1Q68DA7 1419 aa26.22■■□□□ 1.79
MRPL28-202ENST00000389675 ARID3CA6NKF2 412 aa26.21■■□□□ 1.79
MRPL28-202ENST00000389675 ASXL2Q76L83 1435 aa26.18■■□□□ 1.78
MRPL28-202ENST00000389675 CEP162Q5TB80 1403 aa26.16■■□□□ 1.78
MRPL28-202ENST00000389675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.15■■□□□ 1.78
MRPL28-202ENST00000389675 HNRNPUL2Q1KMD3 747 aaKnown RBP26.15■■□□□ 1.78
MRPL28-202ENST00000389675 ATP1B4Q9UN42 357 aaPredicted RBP26.15■■□□□ 1.78
MRPL28-202ENST00000389675 NUP153P49790 1475 aaKnown RBP26.13■■□□□ 1.77
MRPL28-202ENST00000389675 ATP10BO94823 1461 aa26.11■■□□□ 1.77
MRPL28-202ENST00000389675 HECW1Q76N89 1606 aa26.08■■□□□ 1.77
MRPL28-202ENST00000389675 WDR7Q9Y4E6 1490 aa26.08■■□□□ 1.77
MRPL28-202ENST00000389675 KDM4FA0A1W2PPD8 638 aa26.07■■□□□ 1.76
MRPL28-202ENST00000389675 PPRC1Q5VV67 1664 aaKnown RBP26.04■■□□□ 1.76
MRPL28-202ENST00000389675 KCNH8Q96L42 1107 aa26.02■■□□□ 1.76
MRPL28-202ENST00000389675 EPRSP07814 1512 aaKnown RBP26.02■■□□□ 1.76
MRPL28-202ENST00000389675 PCF11O94913 1555 aaKnown RBP26.01■■□□□ 1.75
MRPL28-202ENST00000389675 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
MRPL28-202ENST00000389675 CDK13Q14004 1512 aaKnown RBP25.99■■□□□ 1.75
MRPL28-202ENST00000389675 PLEKHD1A6NEE1 506 aa25.97■■□□□ 1.75
MRPL28-202ENST00000389675 GLI2P10070 1586 aa25.97■■□□□ 1.75
MRPL28-202ENST00000389675 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
MRPL28-202ENST00000389675 CDK11AQ9UQ88 783 aaPredicted RBP25.92■■□□□ 1.74
MRPL28-202ENST00000389675 CCDC18Q5T9S5 1454 aa25.91■■□□□ 1.74
MRPL28-202ENST00000389675 LRRIQ1Q96JM4 1722 aa25.87■■□□□ 1.73
MRPL28-202ENST00000389675 MAP3K4Q9Y6R4 1608 aa25.86■■□□□ 1.73
MRPL28-202ENST00000389675 CFAP43Q8NDM7 1665 aa25.83■■□□□ 1.73
MRPL28-202ENST00000389675 CD109Q6YHK3 1445 aa25.83■■□□□ 1.73
MRPL28-202ENST00000389675 VPS8Q8N3P4 1428 aa25.83■■□□□ 1.73
MRPL28-202ENST00000389675 ADGRL1O94910 1474 aa25.83■■□□□ 1.73
MRPL28-202ENST00000389675 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
MRPL28-202ENST00000389675 ABCA9Q8IUA7 1624 aa25.79■■□□□ 1.72
MRPL28-202ENST00000389675 TROQ12816 1431 aaPredicted RBP25.79■■□□□ 1.72
MRPL28-202ENST00000389675 ILDR1Q86SU0 546 aaPredicted RBP25.75■■□□□ 1.71
MRPL28-202ENST00000389675 KIF14Q15058 1648 aa25.74■■□□□ 1.71
MRPL28-202ENST00000389675 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
MRPL28-202ENST00000389675 COL17A1Q9UMD9 1497 aaPredicted RBP25.73■■□□□ 1.71
MRPL28-202ENST00000389675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.71
MRPL28-202ENST00000389675 TTC37Q6PGP7 1564 aa25.7■■□□□ 1.71
MRPL28-202ENST00000389675 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
MRPL28-202ENST00000389675 HECW2Q9P2P5 1572 aa25.69■■□□□ 1.7
MRPL28-202ENST00000389675 APLP2Q06481 763 aa25.64■■□□□ 1.7
MRPL28-202ENST00000389675 TIAM1Q13009 1591 aa25.63■■□□□ 1.69
MRPL28-202ENST00000389675 EHBP1L1Q8N3D4 1523 aa25.61■■□□□ 1.69
MRPL28-202ENST00000389675 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
MRPL28-202ENST00000389675 NEO1Q92859 1461 aa25.59■■□□□ 1.69
MRPL28-202ENST00000389675 PLCH2O75038 1416 aa25.58■■□□□ 1.69
MRPL28-202ENST00000389675 FANCAO15360 1455 aa25.58■■□□□ 1.69
MRPL28-202ENST00000389675 PHLDB1Q86UU1 1377 aa25.57■■□□□ 1.68
MRPL28-202ENST00000389675 CFAP74Q9C0B2 1584 aa25.57■■□□□ 1.68
MRPL28-202ENST00000389675 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
MRPL28-202ENST00000389675 EFCAB2Q5VUJ9 269 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms