RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 TMEM121BQ9BXQ6 578 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1340P-201ENST00000384438 MYT1LQ9UL68 1186 aa0.89□□□□□ -2.27
RNU6-1340P-201ENST00000384438 POTEB3A0JP26 581 aa0.88□□□□□ -2.27
RNU6-1340P-201ENST00000384438 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
RNU6-1340P-201ENST00000384438 POTEBQ6S5H4 581 aa0.88□□□□□ -2.27
RNU6-1340P-201ENST00000384438 TREML4Q6UXN2 200 aa0.88□□□□□ -2.27
RNU6-1340P-201ENST00000384438 LCE5AQ5TCM9 118 aa0.86□□□□□ -2.27
RNU6-1340P-201ENST00000384438 PELP1Q8IZL8 1130 aaKnown RBP0.86□□□□□ -2.27
RNU6-1340P-201ENST00000384438 PITPNM1O00562 1244 aa0.84□□□□□ -2.27
RNU6-1340P-201ENST00000384438 REM2Q8IYK8 340 aaPredicted RBP0.84□□□□□ -2.27
RNU6-1340P-201ENST00000384438 AKT1S1Q96B36 256 aa0.84□□□□□ -2.27
RNU6-1340P-201ENST00000384438 WDR26Q9H7D7 661 aa0.84□□□□□ -2.27
RNU6-1340P-201ENST00000384438 CCER1Q8TC90 406 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1340P-201ENST00000384438 MARVELD3Q96A59 401 aa0.83□□□□□ -2.28
RNU6-1340P-201ENST00000384438 WIPF1O43516 503 aa0.82□□□□□ -2.28
RNU6-1340P-201ENST00000384438 INSM1Q01101 510 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1340P-201ENST00000384438 KRTAP9-3Q9BYQ3 159 aa0.82□□□□□ -2.28
RNU6-1340P-201ENST00000384438 SPINK5Q9NQ38 1064 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1340P-201ENST00000384438 COBLO75128 1261 aa0.81□□□□□ -2.28
RNU6-1340P-201ENST00000384438 KCTD17Q8N5Z5 321 aa0.81□□□□□ -2.28
RNU6-1340P-201ENST00000384438 Q8N3U1 123 aa0.8□□□□□ -2.28
RNU6-1340P-201ENST00000384438 CAPN15O75808 1086 aa0.79□□□□□ -2.28
RNU6-1340P-201ENST00000384438 HS3ST6Q96QI5 342 aa0.79□□□□□ -2.28
RNU6-1340P-201ENST00000384438 METRNQ9UJH8 293 aa0.79□□□□□ -2.28
RNU6-1340P-201ENST00000384438 OBSCNQ5VST9 7968 aa0.78□□□□□ -2.28
RNU6-1340P-201ENST00000384438 C7P10643 843 aa0.77□□□□□ -2.29
RNU6-1340P-201ENST00000384438 PRKAR2AP13861 404 aaKnown RBP0.77□□□□□ -2.29
RNU6-1340P-201ENST00000384438 PPP6R1Q9UPN7 881 aa0.77□□□□□ -2.29
RNU6-1340P-201ENST00000384438 GSK3AP49840 483 aa0.75□□□□□ -2.29
RNU6-1340P-201ENST00000384438 LAPTM4AQ15012 233 aa0.75□□□□□ -2.29
RNU6-1340P-201ENST00000384438 LCE4AQ5TA78 99 aa0.75□□□□□ -2.29
RNU6-1340P-201ENST00000384438 AVENQ9NQS1 362 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1340P-201ENST00000384438 KRTAP4-3Q9BYR4 195 aa0.74□□□□□ -2.29
RNU6-1340P-201ENST00000384438 KRTAP5-5Q701N2 237 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1340P-201ENST00000384438 SLC39A7Q92504 469 aa0.73□□□□□ -2.29
RNU6-1340P-201ENST00000384438 GALR2O43603 387 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1340P-201ENST00000384438 PTGER2P43116 358 aa0.72□□□□□ -2.29
RNU6-1340P-201ENST00000384438 FAM181BA6NEQ2 426 aa0.71□□□□□ -2.3
RNU6-1340P-201ENST00000384438 KRTAP9-7A8MTY7 169 aa0.71□□□□□ -2.3
RNU6-1340P-201ENST00000384438 ADAM23O75077 832 aa0.71□□□□□ -2.3
RNU6-1340P-201ENST00000384438 POTEFA5A3E0 1075 aa0.7□□□□□ -2.3
RNU6-1340P-201ENST00000384438 FAM205CA6NFA0 338 aa0.7□□□□□ -2.3
RNU6-1340P-201ENST00000384438 HOXD11P31277 338 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1340P-201ENST00000384438 EMP3P54852 163 aa0.7□□□□□ -2.3
RNU6-1340P-201ENST00000384438 FZD5Q13467 585 aa0.7□□□□□ -2.3
RNU6-1340P-201ENST00000384438 ABCB7O75027 752 aa0.69□□□□□ -2.3
RNU6-1340P-201ENST00000384438 IFFO2Q5TF58 517 aa0.69□□□□□ -2.3
RNU6-1340P-201ENST00000384438 KCTD12Q96CX2 325 aaKnown RBP0.69□□□□□ -2.3
RNU6-1340P-201ENST00000384438 WFS1O76024 890 aa0.68□□□□□ -2.3
RNU6-1340P-201ENST00000384438 KCNMA1Q12791 1236 aa0.68□□□□□ -2.3
RNU6-1340P-201ENST00000384438 HCSTQ9UBK5 93 aa0.68□□□□□ -2.3
RNU6-1340P-201ENST00000384438 PSPNO60542 156 aa0.67□□□□□ -2.3
RNU6-1340P-201ENST00000384438 CD44P16070 742 aaKnown RBP0.67□□□□□ -2.3
RNU6-1340P-201ENST00000384438 COL9A3Q14050 684 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1340P-201ENST00000384438 A0A0G2JS52 829 aa0.66□□□□□ -2.3
RNU6-1340P-201ENST00000384438 SLAIN1Q8ND83 568 aa0.66□□□□□ -2.3
RNU6-1340P-201ENST00000384438 POTECB2RU33 542 aa0.65□□□□□ -2.31
RNU6-1340P-201ENST00000384438 YBX3P16989 372 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU6-1340P-201ENST00000384438 LCE2CQ5TA81 110 aa0.65□□□□□ -2.31
RNU6-1340P-201ENST00000384438 ASTLQ6HA08 431 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1340P-201ENST00000384438 ZNF579Q8NAF0 562 aaKnown RBP0.65□□□□□ -2.31
RNU6-1340P-201ENST00000384438 GFRA3O60609 400 aa0.64□□□□□ -2.31
RNU6-1340P-201ENST00000384438 ADRA2BP18089 450 aa0.64□□□□□ -2.31
RNU6-1340P-201ENST00000384438 KRTAP10-7P60409 375 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1340P-201ENST00000384438 NFX1Q12986 1120 aaKnown RBP0.64□□□□□ -2.31
RNU6-1340P-201ENST00000384438 IGHA1P01876 353 aa0.63□□□□□ -2.31
RNU6-1340P-201ENST00000384438 TMEM151AQ8N4L1 468 aa0.62□□□□□ -2.31
RNU6-1340P-201ENST00000384438 SNPHO15079 494 aa0.61□□□□□ -2.31
RNU6-1340P-201ENST00000384438 COL9A1P20849 921 aa0.61□□□□□ -2.31
RNU6-1340P-201ENST00000384438 ATMINO43313 823 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1340P-201ENST00000384438 NRG2O14511 850 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1340P-201ENST00000384438 GDF11O95390 407 aa0.59□□□□□ -2.31
RNU6-1340P-201ENST00000384438 RASSF7Q02833 373 aa0.57□□□□□ -2.32
RNU6-1340P-201ENST00000384438 GPAT2Q6NUI2 795 aa0.57□□□□□ -2.32
RNU6-1340P-201ENST00000384438 ZSCAN1Q8NBB4 408 aa0.57□□□□□ -2.32
RNU6-1340P-201ENST00000384438 KRTAP10-9P60411 292 aa0.54□□□□□ -2.32
RNU6-1340P-201ENST00000384438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP0.54□□□□□ -2.32
RNU6-1340P-201ENST00000384438 NTN5Q8WTR8 489 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1340P-201ENST00000384438 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.33
RNU6-1340P-201ENST00000384438 SLURP2P0DP57 97 aa0.52□□□□□ -2.33
RNU6-1340P-201ENST00000384438 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
RNU6-1340P-201ENST00000384438 CHADLQ6NUI6 762 aa0.51□□□□□ -2.33
RNU6-1340P-201ENST00000384438 SCAF1Q9H7N4 1312 aaKnown RBP0.51□□□□□ -2.33
RNU6-1340P-201ENST00000384438 KRTAP9-6A8MVA2 160 aa0.5□□□□□ -2.33
RNU6-1340P-201ENST00000384438 COLQQ9Y215 455 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1340P-201ENST00000384438 JAG2Q9Y219 1238 aa0.5□□□□□ -2.33
RNU6-1340P-201ENST00000384438 DNMT3AQ9Y6K1 912 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1340P-201ENST00000384438 NOTCH2Q04721 2471 aa0.5□□□□□ -2.33
RNU6-1340P-201ENST00000384438 TRHP20396 242 aaPredicted RBP0.49□□□□□ -2.33
RNU6-1340P-201ENST00000384438 FOXK2Q01167 660 aa0.49□□□□□ -2.33
RNU6-1340P-201ENST00000384438 K7ELQ4 463 aaPredicted RBP0.48□□□□□ -2.33
RNU6-1340P-201ENST00000384438 GSC2O15499 205 aa0.48□□□□□ -2.33
RNU6-1340P-201ENST00000384438 TXKP42681 527 aa0.48□□□□□ -2.33
RNU6-1340P-201ENST00000384438 FMNL2Q96PY5 1086 aa0.48□□□□□ -2.33
RNU6-1340P-201ENST00000384438 WBP1LQ9NX94 342 aa0.48□□□□□ -2.33
RNU6-1340P-201ENST00000384438 U3KPZ7 1027 aaPredicted RBP0.48□□□□□ -2.33
RNU6-1340P-201ENST00000384438 JAG1P78504 1218 aa0.47□□□□□ -2.33
RNU6-1340P-201ENST00000384438 ZNF219Q9P2Y4 722 aaPredicted RBP0.47□□□□□ -2.33
RNU6-1340P-201ENST00000384438 ZRANB1Q9UGI0 708 aa0.47□□□□□ -2.33
RNU6-1340P-201ENST00000384438 ATN1P54259 1190 aaPredicted RBP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms