RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 IGF1RP08069 1367 aa31.4■■■□□ 2.62
RPUSD3-201ENST00000383820 CUL7Q14999 1698 aa31.38■■■□□ 2.61
RPUSD3-201ENST00000383820 KIAA0586Q9BVV6 1533 aa31.36■■■□□ 2.61
RPUSD3-201ENST00000383820 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
RPUSD3-201ENST00000383820 NPM1P06748 294 aaKnown RBP eCLIP31.26■■■□□ 2.59
RPUSD3-201ENST00000383820 AEBP2Q6ZN18 517 aaPredicted RBP31.25■■■□□ 2.59
RPUSD3-201ENST00000383820 MAPKBP1O60336 1514 aa31.24■■■□□ 2.59
RPUSD3-201ENST00000383820 ADCY10Q96PN6 1610 aa31.21■■■□□ 2.59
RPUSD3-201ENST00000383820 ABCC10Q5T3U5 1492 aa31.21■■■□□ 2.59
RPUSD3-201ENST00000383820 CARMIL1Q5VZK9 1371 aa31.19■■■□□ 2.58
RPUSD3-201ENST00000383820 FAM69CQ0P6D2 419 aa31.14■■■□□ 2.58
RPUSD3-201ENST00000383820 DIP2BQ9P265 1576 aa31.11■■■□□ 2.57
RPUSD3-201ENST00000383820 PTPRGP23470 1445 aa31.07■■■□□ 2.56
RPUSD3-201ENST00000383820 CARMIL2Q6F5E8 1435 aa31.06■■■□□ 2.56
RPUSD3-201ENST00000383820 IQGAP2Q13576 1575 aa31.03■■■□□ 2.56
RPUSD3-201ENST00000383820 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
RPUSD3-201ENST00000383820 ABCC2Q92887 1545 aa30.93■■■□□ 2.54
RPUSD3-201ENST00000383820 RAPGEF2Q9Y4G8 1499 aa30.91■■■□□ 2.54
RPUSD3-201ENST00000383820 UHRF1BP1LA0JNW5 1464 aa30.89■■■□□ 2.53
RPUSD3-201ENST00000383820 TTBK1Q5TCY1 1321 aaPredicted RBP30.88■■■□□ 2.53
RPUSD3-201ENST00000383820 DISP1Q96F81 1524 aa30.88■■■□□ 2.53
RPUSD3-201ENST00000383820 KDM6BO15054 1643 aa30.87■■■□□ 2.53
RPUSD3-201ENST00000383820 UGGT2Q9NYU1 1516 aa30.84■■■□□ 2.53
RPUSD3-201ENST00000383820 TSPOAP1O95153 1857 aa30.84■■■□□ 2.53
RPUSD3-201ENST00000383820 PLB1Q6P1J6 1458 aa30.83■■■□□ 2.53
RPUSD3-201ENST00000383820 UACAQ9BZF9 1416 aa30.83■■■□□ 2.53
RPUSD3-201ENST00000383820 ASXL2Q76L83 1435 aa30.81■■■□□ 2.52
RPUSD3-201ENST00000383820 GLI2P10070 1586 aa30.79■■■□□ 2.52
RPUSD3-201ENST00000383820 KIAA0556O60303 1618 aa30.74■■■□□ 2.51
RPUSD3-201ENST00000383820 KDM5BQ9UGL1 1544 aa30.73■■■□□ 2.51
RPUSD3-201ENST00000383820 PPRC1Q5VV67 1664 aaKnown RBP30.67■■■□□ 2.5
RPUSD3-201ENST00000383820 CTTNBP2Q8WZ74 1663 aa30.67■■■□□ 2.5
RPUSD3-201ENST00000383820 ZCCHC11Q5TAX3 1644 aaKnown RBP30.64■■■□□ 2.5
RPUSD3-201ENST00000383820 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
RPUSD3-201ENST00000383820 GOLGA3Q08378 1498 aa30.6■■■□□ 2.49
RPUSD3-201ENST00000383820 MAP3K4Q9Y6R4 1608 aa30.59■■■□□ 2.49
RPUSD3-201ENST00000383820 PRXQ9BXM0 1461 aa30.57■■■□□ 2.48
RPUSD3-201ENST00000383820 KDM4FA0A1W2PPD8 638 aa30.56■■■□□ 2.48
RPUSD3-201ENST00000383820 TEX14Q8IWB6 1497 aa30.54■■■□□ 2.48
RPUSD3-201ENST00000383820 WDR7Q9Y4E6 1490 aa30.5■■■□□ 2.47
RPUSD3-201ENST00000383820 ABCA8O94911 1581 aa30.48■■■□□ 2.47
RPUSD3-201ENST00000383820 COL17A1Q9UMD9 1497 aaPredicted RBP30.45■■■□□ 2.47
RPUSD3-201ENST00000383820 CFAP43Q8NDM7 1665 aa30.36■■■□□ 2.45
RPUSD3-201ENST00000383820 MAGI3Q5TCQ9 1506 aa30.35■■■□□ 2.45
RPUSD3-201ENST00000383820 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
RPUSD3-201ENST00000383820 CD109Q6YHK3 1445 aa30.33■■■□□ 2.45
RPUSD3-201ENST00000383820 ADGRL1O94910 1474 aa30.31■■■□□ 2.44
RPUSD3-201ENST00000383820 CSRNP3Q8WYN3 585 aa30.29■■■□□ 2.44
RPUSD3-201ENST00000383820 KCNH8Q96L42 1107 aa30.28■■■□□ 2.44
RPUSD3-201ENST00000383820 SAMD9Q5K651 1589 aa30.23■■■□□ 2.43
RPUSD3-201ENST00000383820 ATP10BO94823 1461 aa30.21■■■□□ 2.43
RPUSD3-201ENST00000383820 EEA1Q15075 1411 aa30.21■■■□□ 2.43
RPUSD3-201ENST00000383820 P3H3Q8IVL6 736 aa30.2■■■□□ 2.43
RPUSD3-201ENST00000383820 RAPGEF6Q8TEU7 1601 aa30.12■■■□□ 2.41
RPUSD3-201ENST00000383820 ARAP3Q8WWN8 1544 aa30.12■■■□□ 2.41
RPUSD3-201ENST00000383820 ABCA9Q8IUA7 1624 aa30.11■■■□□ 2.41
RPUSD3-201ENST00000383820 ARID3CA6NKF2 412 aa30.1■■■□□ 2.41
RPUSD3-201ENST00000383820 PHLDB1Q86UU1 1377 aa30.08■■■□□ 2.41
RPUSD3-201ENST00000383820 NUP153P49790 1475 aaKnown RBP30■■■□□ 2.39
RPUSD3-201ENST00000383820 NEO1Q92859 1461 aa29.98■■■□□ 2.39
RPUSD3-201ENST00000383820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
RPUSD3-201ENST00000383820 HNRNPUL2Q1KMD3 747 aaKnown RBP29.97■■■□□ 2.39
RPUSD3-201ENST00000383820 FHOD3Q2V2M9 1422 aa29.96■■■□□ 2.39
RPUSD3-201ENST00000383820 KIF21BO75037 1637 aa29.96■■■□□ 2.39
RPUSD3-201ENST00000383820 EFCAB5A4FU69 1503 aa29.93■■■□□ 2.38
RPUSD3-201ENST00000383820 HECW2Q9P2P5 1572 aa29.93■■■□□ 2.38
RPUSD3-201ENST00000383820 RANGAP1P46060 587 aaPredicted RBP29.91■■■□□ 2.38
RPUSD3-201ENST00000383820 PLEKHD1A6NEE1 506 aa29.87■■■□□ 2.37
RPUSD3-201ENST00000383820 RAPGEF3O95398 923 aa29.84■■■□□ 2.37
RPUSD3-201ENST00000383820 FRMPD1Q5SYB0 1578 aa29.81■■■□□ 2.36
RPUSD3-201ENST00000383820 ADAMTSL3P82987 1691 aa29.78■■■□□ 2.36
RPUSD3-201ENST00000383820 CFAP74Q9C0B2 1584 aa29.77■■■□□ 2.36
RPUSD3-201ENST00000383820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.75■■■□□ 2.35
RPUSD3-201ENST00000383820 DENND4BO75064 1496 aaPredicted RBP29.74■■■□□ 2.35
RPUSD3-201ENST00000383820 FANCAO15360 1455 aa29.73■■■□□ 2.35
RPUSD3-201ENST00000383820 AKNAQ7Z591 1439 aa29.72■■■□□ 2.35
RPUSD3-201ENST00000383820 ILDR1Q86SU0 546 aaPredicted RBP29.72■■■□□ 2.35
RPUSD3-201ENST00000383820 RICTORQ6R327 1708 aa29.71■■■□□ 2.35
RPUSD3-201ENST00000383820 PTPRMP28827 1452 aa29.7■■■□□ 2.35
RPUSD3-201ENST00000383820 BCORL1Q5H9F3 1711 aa29.7■■■□□ 2.34
RPUSD3-201ENST00000383820 TTC37Q6PGP7 1564 aa29.69■■■□□ 2.34
RPUSD3-201ENST00000383820 ARHGEF40Q8TER5 1519 aa29.68■■■□□ 2.34
RPUSD3-201ENST00000383820 CDK13Q14004 1512 aaKnown RBP29.67■■■□□ 2.34
RPUSD3-201ENST00000383820 FMN1Q68DA7 1419 aa29.66■■■□□ 2.34
RPUSD3-201ENST00000383820 UBTFP17480 764 aaKnown RBP29.66■■■□□ 2.34
RPUSD3-201ENST00000383820 ARID4BQ4LE39 1312 aaPredicted RBP29.64■■■□□ 2.34
RPUSD3-201ENST00000383820 ZMYM4Q5VZL5 1548 aa29.63■■■□□ 2.33
RPUSD3-201ENST00000383820 HECW1Q76N89 1606 aa29.62■■■□□ 2.33
RPUSD3-201ENST00000383820 MADDQ8WXG6 1647 aa29.6■■■□□ 2.33
RPUSD3-201ENST00000383820 ARHGAP35Q9NRY4 1499 aa29.6■■■□□ 2.33
RPUSD3-201ENST00000383820 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
RPUSD3-201ENST00000383820 PLCH2O75038 1416 aa29.59■■■□□ 2.33
RPUSD3-201ENST00000383820 MAGI2Q86UL8 1455 aa29.58■■■□□ 2.33
RPUSD3-201ENST00000383820 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
RPUSD3-201ENST00000383820 ZFYVE16Q7Z3T8 1539 aa29.55■■■□□ 2.32
RPUSD3-201ENST00000383820 EHMT2Q96KQ7 1210 aa29.53■■■□□ 2.32
RPUSD3-201ENST00000383820 POGZQ7Z3K3 1410 aa29.53■■■□□ 2.32
RPUSD3-201ENST00000383820 ATP1B4Q9UN42 357 aaPredicted RBP29.52■■■□□ 2.32
RPUSD3-201ENST00000383820 SCAPERQ9BY12 1400 aa29.51■■■□□ 2.31
RPUSD3-201ENST00000383820 YEATS2Q9ULM3 1422 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms