RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 EIF5BO60841 1220 aaKnown RBP29.01■■■□□ 2.23
NKX3-2-201ENST00000382438 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
NKX3-2-201ENST00000382438 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
NKX3-2-201ENST00000382438 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
NKX3-2-201ENST00000382438 ZBTB47Q9UFB7 747 aaPredicted RBP28.93■■■□□ 2.22
NKX3-2-201ENST00000382438 IPO9Q96P70 1041 aaKnown RBP28.93■■■□□ 2.22
NKX3-2-201ENST00000382438 ANP32AP39687 249 aaKnown RBP28.89■■■□□ 2.22
NKX3-2-201ENST00000382438 KIF21BO75037 1637 aa28.88■■■□□ 2.21
NKX3-2-201ENST00000382438 MAPKBP1O60336 1514 aa28.88■■■□□ 2.21
NKX3-2-201ENST00000382438 RAB3GAP2Q9H2M9 1393 aa28.85■■■□□ 2.21
NKX3-2-201ENST00000382438 RAPGEF2Q9Y4G8 1499 aa28.78■■■□□ 2.2
NKX3-2-201ENST00000382438 WASHC2AQ641Q2 1341 aa28.77■■■□□ 2.2
NKX3-2-201ENST00000382438 LAS1LQ9Y4W2 734 aaKnown RBP28.76■■■□□ 2.2
NKX3-2-201ENST00000382438 RRBP1Q9P2E9 1410 aaKnown RBP28.76■■■□□ 2.19
NKX3-2-201ENST00000382438 BRPF3Q9ULD4 1205 aa28.76■■■□□ 2.19
NKX3-2-201ENST00000382438 CUX2O14529 1486 aa28.76■■■□□ 2.19
NKX3-2-201ENST00000382438 NEFMP07197 916 aa28.74■■■□□ 2.19
NKX3-2-201ENST00000382438 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
NKX3-2-201ENST00000382438 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
NKX3-2-201ENST00000382438 PKNOX2Q96KN3 472 aa28.68■■■□□ 2.18
NKX3-2-201ENST00000382438 NPM2Q86SE8 214 aaKnown RBP28.67■■■□□ 2.18
NKX3-2-201ENST00000382438 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
NKX3-2-201ENST00000382438 CCDC184Q52MB2 194 aa28.64■■■□□ 2.18
NKX3-2-201ENST00000382438 C11orf95C9JLR9 678 aaPredicted RBP28.62■■■□□ 2.17
NKX3-2-201ENST00000382438 TIMELESSQ9UNS1 1208 aa28.62■■■□□ 2.17
NKX3-2-201ENST00000382438 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
NKX3-2-201ENST00000382438 FAM9BQ8IZU0 186 aa28.59■■■□□ 2.17
NKX3-2-201ENST00000382438 WASHC2CQ9Y4E1 1318 aa28.59■■■□□ 2.17
NKX3-2-201ENST00000382438 SETD5Q9C0A6 1442 aa28.51■■■□□ 2.16
NKX3-2-201ENST00000382438 ARAP1Q96P48 1450 aa28.51■■■□□ 2.15
NKX3-2-201ENST00000382438 USP35Q9P2H5 1018 aa28.47■■■□□ 2.15
NKX3-2-201ENST00000382438 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
NKX3-2-201ENST00000382438 GSE1Q14687 1217 aa28.39■■■□□ 2.14
NKX3-2-201ENST00000382438 FAM50AQ14320 339 aaKnown RBP28.38■■■□□ 2.13
NKX3-2-201ENST00000382438 AKNAQ7Z591 1439 aa28.38■■■□□ 2.13
NKX3-2-201ENST00000382438 ZBED9Q6R2W3 1325 aa28.36■■■□□ 2.13
NKX3-2-201ENST00000382438 MRS2Q9HD23 443 aa28.35■■■□□ 2.13
NKX3-2-201ENST00000382438 TONSLQ96HA7 1378 aa28.34■■■□□ 2.13
NKX3-2-201ENST00000382438 SENP3-EIF4A1A0A087X0R7 540 aa28.33■■■□□ 2.13
NKX3-2-201ENST00000382438 PPM1GO15355 546 aaPredicted RBP28.33■■■□□ 2.12
NKX3-2-201ENST00000382438 FRAT1Q92837 279 aaPredicted RBP28.3■■■□□ 2.12
NKX3-2-201ENST00000382438 RSPH6AQ9H0K4 717 aa28.3■■■□□ 2.12
NKX3-2-201ENST00000382438 PDE4AP27815 886 aa28.21■■■□□ 2.11
NKX3-2-201ENST00000382438 VSIG10Q8N0Z9 540 aa28.2■■■□□ 2.11
NKX3-2-201ENST00000382438 ZMYND15Q9H091 742 aa28.2■■■□□ 2.1
NKX3-2-201ENST00000382438 PRKRIP1Q9H875 184 aaPredicted RBP28.2■■■□□ 2.1
NKX3-2-201ENST00000382438 NFKBIBQ15653 356 aa28.19■■■□□ 2.1
NKX3-2-201ENST00000382438 HSPA5P11021 654 aaKnown RBP28.19■■■□□ 2.1
NKX3-2-201ENST00000382438 CNGB1Q14028 1251 aaPredicted RBP28.17■■■□□ 2.1
NKX3-2-201ENST00000382438 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
NKX3-2-201ENST00000382438 SLC4A3P48751 1232 aa28.14■■■□□ 2.1
NKX3-2-201ENST00000382438 NUDCQ9Y266 331 aa28.11■■■□□ 2.09
NKX3-2-201ENST00000382438 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
NKX3-2-201ENST00000382438 DCAF11Q8TEB1 546 aa28.11■■■□□ 2.09
NKX3-2-201ENST00000382438 PHLDB1Q86UU1 1377 aa28.11■■■□□ 2.09
NKX3-2-201ENST00000382438 FAM43AQ8N2R8 423 aa28.1■■■□□ 2.09
NKX3-2-201ENST00000382438 BACH2Q9BYV9 841 aa28.1■■■□□ 2.09
NKX3-2-201ENST00000382438 GLIPR1L2Q4G1C9 344 aa28.1■■■□□ 2.09
NKX3-2-201ENST00000382438 PLEKHG5O94827 1062 aa28.09■■■□□ 2.09
NKX3-2-201ENST00000382438 SMG6Q86US8 1419 aaKnown RBP28.07■■■□□ 2.08
NKX3-2-201ENST00000382438 RNF123Q5XPI4 1314 aa28.07■■■□□ 2.08
NKX3-2-201ENST00000382438 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
NKX3-2-201ENST00000382438 TCERG1O14776 1098 aaKnown RBP28.06■■■□□ 2.08
NKX3-2-201ENST00000382438 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
NKX3-2-201ENST00000382438 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
NKX3-2-201ENST00000382438 SKAP1Q86WV1 359 aa28■■■□□ 2.07
NKX3-2-201ENST00000382438 ARHGAP35Q9NRY4 1499 aa27.99■■■□□ 2.07
NKX3-2-201ENST00000382438 EXOC6Q8TAG9 804 aa27.99■■■□□ 2.07
NKX3-2-201ENST00000382438 PRXQ9BXM0 1461 aa27.99■■■□□ 2.07
NKX3-2-201ENST00000382438 EIF4G2P78344 907 aaKnown RBP eCLIP27.96■■■□□ 2.07
NKX3-2-201ENST00000382438 PODXL2Q9NZ53 605 aa27.95■■■□□ 2.06
NKX3-2-201ENST00000382438 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
NKX3-2-201ENST00000382438 FRAT2O75474 233 aaPredicted RBP27.93■■■□□ 2.06
NKX3-2-201ENST00000382438 DDRGK1Q96HY6 314 aa27.91■■■□□ 2.06
NKX3-2-201ENST00000382438 RRAGDQ9NQL2 400 aaPredicted RBP27.91■■■□□ 2.06
NKX3-2-201ENST00000382438 ATP1B4Q9UN42 357 aaPredicted RBP27.91■■■□□ 2.06
NKX3-2-201ENST00000382438 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
NKX3-2-201ENST00000382438 NCOA2Q15596 1464 aa27.89■■■□□ 2.05
NKX3-2-201ENST00000382438 DAXXQ9UER7 740 aaPredicted RBP27.88■■■□□ 2.05
NKX3-2-201ENST00000382438 TIAM1Q13009 1591 aa27.85■■■□□ 2.05
NKX3-2-201ENST00000382438 LRRC9Q6ZRR7 1453 aa27.85■■■□□ 2.05
NKX3-2-201ENST00000382438 CCDC7Q96M83 1385 aa27.84■■■□□ 2.05
NKX3-2-201ENST00000382438 MS4A1P11836 297 aa27.84■■■□□ 2.05
NKX3-2-201ENST00000382438 KDM5BQ9UGL1 1544 aa27.82■■■□□ 2.04
NKX3-2-201ENST00000382438 HSP90AA2PQ14568 343 aaPredicted RBP27.81■■■□□ 2.04
NKX3-2-201ENST00000382438 NAP1L5Q96NT1 182 aaPredicted RBP27.8■■■□□ 2.04
NKX3-2-201ENST00000382438 RRP1P56182 461 aaKnown RBP27.79■■■□□ 2.04
NKX3-2-201ENST00000382438 CCDC18Q5T9S5 1454 aa27.75■■■□□ 2.03
NKX3-2-201ENST00000382438 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
NKX3-2-201ENST00000382438 NCOA1Q15788 1441 aa27.71■■■□□ 2.03
NKX3-2-201ENST00000382438 POLR3GLQ9BT43 218 aa27.71■■■□□ 2.03
NKX3-2-201ENST00000382438 UACAQ9BZF9 1416 aa27.7■■■□□ 2.03
NKX3-2-201ENST00000382438 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.021e-6■■□□□ 14.5
NKX3-2-201ENST00000382438 P3H3Q8IVL6 736 aa27.7■■■□□ 2.02
NKX3-2-201ENST00000382438 ARXQ96QS3 562 aa27.7■■■□□ 2.02
NKX3-2-201ENST00000382438 KIF7Q2M1P5 1343 aa27.69■■■□□ 2.02
NKX3-2-201ENST00000382438 POGKQ9P215 609 aa27.69■■■□□ 2.02
NKX3-2-201ENST00000382438 HSP90AA1P07900 732 aaKnown RBP27.67■■■□□ 2.02
NKX3-2-201ENST00000382438 TOP2BQ02880 1626 aa27.65■■■□□ 2.02
NKX3-2-201ENST00000382438 RCAN3Q9UKA8 241 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms