RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
FAM239A-201ENST00000381108 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
FAM239A-201ENST00000381108 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
FAM239A-201ENST00000381108 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
FAM239A-201ENST00000381108 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
FAM239A-201ENST00000381108 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
FAM239A-201ENST00000381108 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
FAM239A-201ENST00000381108 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
FAM239A-201ENST00000381108 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
FAM239A-201ENST00000381108 APLP2Q06481 763 aa16.99■□□□□ 0.31
FAM239A-201ENST00000381108 FBLN2P98095 1184 aa16.99■□□□□ 0.31
FAM239A-201ENST00000381108 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
FAM239A-201ENST00000381108 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
FAM239A-201ENST00000381108 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
FAM239A-201ENST00000381108 CHMP7Q8WUX9 453 aaPredicted RBP16.96■□□□□ 0.31
FAM239A-201ENST00000381108 IQGAP2Q13576 1575 aa16.96■□□□□ 0.31
FAM239A-201ENST00000381108 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
FAM239A-201ENST00000381108 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
FAM239A-201ENST00000381108 PCF11O94913 1555 aaKnown RBP16.9■□□□□ 0.3
FAM239A-201ENST00000381108 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
FAM239A-201ENST00000381108 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
FAM239A-201ENST00000381108 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
FAM239A-201ENST00000381108 KANK4Q5T7N3 995 aaPredicted RBP16.85■□□□□ 0.29
FAM239A-201ENST00000381108 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
FAM239A-201ENST00000381108 CHD1O14646 1710 aa16.84■□□□□ 0.29
FAM239A-201ENST00000381108 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
FAM239A-201ENST00000381108 NUP160Q12769 1436 aa16.82■□□□□ 0.28
FAM239A-201ENST00000381108 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
FAM239A-201ENST00000381108 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
FAM239A-201ENST00000381108 HRCP23327 699 aa16.8■□□□□ 0.28
FAM239A-201ENST00000381108 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
FAM239A-201ENST00000381108 KIAA0556O60303 1618 aa16.79■□□□□ 0.28
FAM239A-201ENST00000381108 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
FAM239A-201ENST00000381108 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
FAM239A-201ENST00000381108 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
FAM239A-201ENST00000381108 LRRIQ1Q96JM4 1722 aa16.75■□□□□ 0.27
FAM239A-201ENST00000381108 JPH4Q96JJ6 628 aa16.73■□□□□ 0.27
FAM239A-201ENST00000381108 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
FAM239A-201ENST00000381108 HECW1Q76N89 1606 aa16.69■□□□□ 0.26
FAM239A-201ENST00000381108 ARID3CA6NKF2 412 aa16.68■□□□□ 0.26
FAM239A-201ENST00000381108 CARMIL2Q6F5E8 1435 aa16.68■□□□□ 0.26
FAM239A-201ENST00000381108 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
FAM239A-201ENST00000381108 CDK13Q14004 1512 aaKnown RBP16.63■□□□□ 0.25
FAM239A-201ENST00000381108 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
FAM239A-201ENST00000381108 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
FAM239A-201ENST00000381108 RAPGEF6Q8TEU7 1601 aa16.63■□□□□ 0.25
FAM239A-201ENST00000381108 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
FAM239A-201ENST00000381108 EPRSP07814 1512 aaKnown RBP16.62■□□□□ 0.25
FAM239A-201ENST00000381108 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
FAM239A-201ENST00000381108 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
FAM239A-201ENST00000381108 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
FAM239A-201ENST00000381108 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
FAM239A-201ENST00000381108 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
FAM239A-201ENST00000381108 MAGI3Q5TCQ9 1506 aa16.59■□□□□ 0.25
FAM239A-201ENST00000381108 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
FAM239A-201ENST00000381108 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
FAM239A-201ENST00000381108 EHBP1L1Q8N3D4 1523 aa16.57■□□□□ 0.24
FAM239A-201ENST00000381108 ERCC6L2Q5T890 1561 aa16.56■□□□□ 0.24
FAM239A-201ENST00000381108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
FAM239A-201ENST00000381108 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
FAM239A-201ENST00000381108 ITGAEP38570 1179 aa16.53■□□□□ 0.24
FAM239A-201ENST00000381108 NCOA2Q15596 1464 aa16.52■□□□□ 0.24
FAM239A-201ENST00000381108 PTPRGP23470 1445 aa16.52■□□□□ 0.24
FAM239A-201ENST00000381108 ABCA8O94911 1581 aa16.51■□□□□ 0.23
FAM239A-201ENST00000381108 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
FAM239A-201ENST00000381108 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
FAM239A-201ENST00000381108 CCER1Q8TC90 406 aaPredicted RBP16.47■□□□□ 0.23
FAM239A-201ENST00000381108 FGD6Q6ZV73 1430 aa16.46■□□□□ 0.23
FAM239A-201ENST00000381108 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
FAM239A-201ENST00000381108 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
FAM239A-201ENST00000381108 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
FAM239A-201ENST00000381108 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
FAM239A-201ENST00000381108 ATP10BO94823 1461 aa16.42■□□□□ 0.22
FAM239A-201ENST00000381108 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
FAM239A-201ENST00000381108 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
FAM239A-201ENST00000381108 KCNA4P22459 653 aa16.41■□□□□ 0.22
FAM239A-201ENST00000381108 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
FAM239A-201ENST00000381108 KIF14Q15058 1648 aa16.39■□□□□ 0.21
FAM239A-201ENST00000381108 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
FAM239A-201ENST00000381108 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
FAM239A-201ENST00000381108 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
FAM239A-201ENST00000381108 ADCY10Q96PN6 1610 aa16.35■□□□□ 0.21
FAM239A-201ENST00000381108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.35■□□□□ 0.21
FAM239A-201ENST00000381108 MIA2Q96PC5 1412 aa16.31■□□□□ 0.2
FAM239A-201ENST00000381108 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
FAM239A-201ENST00000381108 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
FAM239A-201ENST00000381108 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
FAM239A-201ENST00000381108 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
FAM239A-201ENST00000381108 RAB3GAP2Q9H2M9 1393 aa16.29■□□□□ 0.2
FAM239A-201ENST00000381108 GPATCH8Q9UKJ3 1502 aaKnown RBP16.28■□□□□ 0.2
FAM239A-201ENST00000381108 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.2
FAM239A-201ENST00000381108 UHRF1BP1LA0JNW5 1464 aa16.27■□□□□ 0.2
FAM239A-201ENST00000381108 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.2
FAM239A-201ENST00000381108 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.19
FAM239A-201ENST00000381108 CFDP1Q9UEE9 299 aaPredicted RBP16.26■□□□□ 0.19
FAM239A-201ENST00000381108 ZNF777Q9ULD5 760 aaPredicted RBP16.26■□□□□ 0.19
FAM239A-201ENST00000381108 ABCC10Q5T3U5 1492 aa16.25■□□□□ 0.19
FAM239A-201ENST00000381108 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
FAM239A-201ENST00000381108 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
FAM239A-201ENST00000381108 CAMSAP2Q08AD1 1489 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms