RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 JPH4Q96JJ6 628 aa30.42■■■□□ 2.46
CDKN1C-201ENST00000380725 CARMIL1Q5VZK9 1371 aa30.4■■■□□ 2.46
CDKN1C-201ENST00000380725 PRG4Q92954 1404 aaPredicted RBP30.34■■■□□ 2.45
CDKN1C-201ENST00000380725 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
CDKN1C-201ENST00000380725 TRHP20396 242 aaPredicted RBP30.31■■■□□ 2.44
CDKN1C-201ENST00000380725 KIAA0586Q9BVV6 1533 aa30.29■■■□□ 2.44
CDKN1C-201ENST00000380725 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
CDKN1C-201ENST00000380725 IQGAP2Q13576 1575 aa30.04■■■□□ 2.4
CDKN1C-201ENST00000380725 CARMIL2Q6F5E8 1435 aa29.99■■■□□ 2.39
CDKN1C-201ENST00000380725 NPM1P06748 294 aaKnown RBP eCLIP29.97■■■□□ 2.39
CDKN1C-201ENST00000380725 TTBK1Q5TCY1 1321 aaPredicted RBP29.96■■■□□ 2.39
CDKN1C-201ENST00000380725 PTPRGP23470 1445 aa29.95■■■□□ 2.38
CDKN1C-201ENST00000380725 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
CDKN1C-201ENST00000380725 CSRNP3Q8WYN3 585 aa29.93■■■□□ 2.38
CDKN1C-201ENST00000380725 TNIKQ9UKE5 1360 aa29.92■■■□□ 2.38
CDKN1C-201ENST00000380725 ADCY10Q96PN6 1610 aa29.88■■■□□ 2.37
CDKN1C-201ENST00000380725 UGGT2Q9NYU1 1516 aa29.87■■■□□ 2.37
CDKN1C-201ENST00000380725 CTTNBP2Q8WZ74 1663 aa29.87■■■□□ 2.37
CDKN1C-201ENST00000380725 DISP1Q96F81 1524 aa29.86■■■□□ 2.37
CDKN1C-201ENST00000380725 EEA1Q15075 1411 aa29.8■■■□□ 2.36
CDKN1C-201ENST00000380725 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
CDKN1C-201ENST00000380725 KIAA0556O60303 1618 aa29.75■■■□□ 2.35
CDKN1C-201ENST00000380725 KIF13AQ9H1H9 1805 aa29.75■■■□□ 2.35
CDKN1C-201ENST00000380725 MAPKBP1O60336 1514 aa29.74■■■□□ 2.35
CDKN1C-201ENST00000380725 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
CDKN1C-201ENST00000380725 FAM69CQ0P6D2 419 aa29.71■■■□□ 2.35
CDKN1C-201ENST00000380725 GOLGA3Q08378 1498 aa29.7■■■□□ 2.35
CDKN1C-201ENST00000380725 UHRF1BP1LA0JNW5 1464 aa29.68■■■□□ 2.34
CDKN1C-201ENST00000380725 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
CDKN1C-201ENST00000380725 ABCC2Q92887 1545 aa29.67■■■□□ 2.34
CDKN1C-201ENST00000380725 DIP2BQ9P265 1576 aa29.59■■■□□ 2.33
CDKN1C-201ENST00000380725 P3H3Q8IVL6 736 aa29.57■■■□□ 2.32
CDKN1C-201ENST00000380725 KDM5BQ9UGL1 1544 aa29.55■■■□□ 2.32
CDKN1C-201ENST00000380725 ASXL2Q76L83 1435 aa29.54■■■□□ 2.32
CDKN1C-201ENST00000380725 PLB1Q6P1J6 1458 aa29.53■■■□□ 2.32
CDKN1C-201ENST00000380725 KIF21BO75037 1637 aa29.51■■■□□ 2.31
CDKN1C-201ENST00000380725 RANGAP1P46060 587 aaPredicted RBP29.5■■■□□ 2.31
CDKN1C-201ENST00000380725 ZCCHC11Q5TAX3 1644 aaKnown RBP29.48■■■□□ 2.31
CDKN1C-201ENST00000380725 TSPOAP1O95153 1857 aa29.47■■■□□ 2.31
CDKN1C-201ENST00000380725 ABCA8O94911 1581 aa29.47■■■□□ 2.31
CDKN1C-201ENST00000380725 EHMT2Q96KQ7 1210 aa29.45■■■□□ 2.31
CDKN1C-201ENST00000380725 SAMD9Q5K651 1589 aa29.44■■■□□ 2.3
CDKN1C-201ENST00000380725 UBTFP17480 764 aaKnown RBP29.41■■■□□ 2.3
CDKN1C-201ENST00000380725 GLI2P10070 1586 aa29.39■■■□□ 2.29
CDKN1C-201ENST00000380725 EPRSP07814 1512 aaKnown RBP29.35■■■□□ 2.29
CDKN1C-201ENST00000380725 ARID3CA6NKF2 412 aa29.32■■■□□ 2.28
CDKN1C-201ENST00000380725 WDR7Q9Y4E6 1490 aa29.3■■■□□ 2.28
CDKN1C-201ENST00000380725 KCNH8Q96L42 1107 aa29.3■■■□□ 2.28
CDKN1C-201ENST00000380725 FHOD3Q2V2M9 1422 aa29.29■■■□□ 2.28
CDKN1C-201ENST00000380725 ATP10BO94823 1461 aa29.26■■■□□ 2.27
CDKN1C-201ENST00000380725 RAPGEF6Q8TEU7 1601 aa29.26■■■□□ 2.27
CDKN1C-201ENST00000380725 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
CDKN1C-201ENST00000380725 PPRC1Q5VV67 1664 aaKnown RBP29.24■■■□□ 2.27
CDKN1C-201ENST00000380725 KDM6BO15054 1643 aa29.23■■■□□ 2.27
CDKN1C-201ENST00000380725 MAP3K4Q9Y6R4 1608 aa29.23■■■□□ 2.27
CDKN1C-201ENST00000380725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
CDKN1C-201ENST00000380725 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
CDKN1C-201ENST00000380725 NUP153P49790 1475 aaKnown RBP29.14■■■□□ 2.26
CDKN1C-201ENST00000380725 TEX14Q8IWB6 1497 aa29.14■■■□□ 2.26
CDKN1C-201ENST00000380725 CD109Q6YHK3 1445 aa29.12■■■□□ 2.25
CDKN1C-201ENST00000380725 CFAP43Q8NDM7 1665 aa29.12■■■□□ 2.25
CDKN1C-201ENST00000380725 ARHGAP35Q9NRY4 1499 aa29.08■■■□□ 2.25
CDKN1C-201ENST00000380725 MAGI3Q5TCQ9 1506 aa29.04■■■□□ 2.24
CDKN1C-201ENST00000380725 PLEKHD1A6NEE1 506 aa29.04■■■□□ 2.24
CDKN1C-201ENST00000380725 COL17A1Q9UMD9 1497 aaPredicted RBP29.04■■■□□ 2.24
CDKN1C-201ENST00000380725 ATP1B4Q9UN42 357 aaPredicted RBP29.02■■■□□ 2.24
CDKN1C-201ENST00000380725 FMN1Q68DA7 1419 aa29.02■■■□□ 2.24
CDKN1C-201ENST00000380725 ABCA9Q8IUA7 1624 aa28.98■■■□□ 2.23
CDKN1C-201ENST00000380725 CDK13Q14004 1512 aaKnown RBP28.91■■■□□ 2.22
CDKN1C-201ENST00000380725 HECW1Q76N89 1606 aa28.89■■■□□ 2.22
CDKN1C-201ENST00000380725 CDK11AQ9UQ88 783 aaPredicted RBP28.84■■■□□ 2.21
CDKN1C-201ENST00000380725 PHLDB1Q86UU1 1377 aa28.84■■■□□ 2.21
CDKN1C-201ENST00000380725 CLIP1P30622 1438 aa28.82■■■□□ 2.2
CDKN1C-201ENST00000380725 ARAP3Q8WWN8 1544 aa28.82■■■□□ 2.2
CDKN1C-201ENST00000380725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.79■■■□□ 2.23e-6■□□□□ 8.9
CDKN1C-201ENST00000380725 NEO1Q92859 1461 aa28.78■■■□□ 2.2
CDKN1C-201ENST00000380725 KDM4FA0A1W2PPD8 638 aa28.77■■■□□ 2.2
CDKN1C-201ENST00000380725 LRRIQ1Q96JM4 1722 aa28.76■■■□□ 2.19
CDKN1C-201ENST00000380725 CASKIN1Q8WXD9 1431 aa28.76■■■□□ 2.19
CDKN1C-201ENST00000380725 TTC37Q6PGP7 1564 aa28.73■■■□□ 2.19
CDKN1C-201ENST00000380725 RAPGEF3O95398 923 aa28.72■■■□□ 2.19
CDKN1C-201ENST00000380725 PCF11O94913 1555 aaKnown RBP28.71■■■□□ 2.19
CDKN1C-201ENST00000380725 TROQ12816 1431 aaPredicted RBP28.68■■■□□ 2.18
CDKN1C-201ENST00000380725 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
CDKN1C-201ENST00000380725 FANCAO15360 1455 aa28.67■■■□□ 2.18
CDKN1C-201ENST00000380725 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
CDKN1C-201ENST00000380725 PLCH2O75038 1416 aa28.65■■■□□ 2.18
CDKN1C-201ENST00000380725 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
CDKN1C-201ENST00000380725 FYCO1Q9BQS8 1478 aa28.64■■■□□ 2.17
CDKN1C-201ENST00000380725 CFAP74Q9C0B2 1584 aa28.63■■■□□ 2.17
CDKN1C-201ENST00000380725 KIF14Q15058 1648 aa28.62■■■□□ 2.17
CDKN1C-201ENST00000380725 ADGRL1O94910 1474 aa28.61■■■□□ 2.17
CDKN1C-201ENST00000380725 DENND4BO75064 1496 aaPredicted RBP28.6■■■□□ 2.17
CDKN1C-201ENST00000380725 EFCAB2Q5VUJ9 269 aa28.6■■■□□ 2.17
CDKN1C-201ENST00000380725 MYO5CQ9NQX4 1742 aa28.6■■■□□ 2.17
CDKN1C-201ENST00000380725 CEP162Q5TB80 1403 aa28.59■■■□□ 2.17
CDKN1C-201ENST00000380725 FRMPD1Q5SYB0 1578 aa28.56■■■□□ 2.16
CDKN1C-201ENST00000380725 RICTORQ6R327 1708 aa28.53■■■□□ 2.16
CDKN1C-201ENST00000380725 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
CDKN1C-201ENST00000380725 ARHGAP5Q13017 1502 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms