RNA–Protein interactions for RNA: ENST00000380569.6

GCOM1-202, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GCOM1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-202ENST00000380569 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
GCOM1-202ENST00000380569 CTTNBP2Q8WZ74 1663 aa28.91■■■□□ 2.22
GCOM1-202ENST00000380569 MAP3K1Q13233 1512 aa28.9■■■□□ 2.22
GCOM1-202ENST00000380569 EFCAB5A4FU69 1503 aa28.87■■■□□ 2.21
GCOM1-202ENST00000380569 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
GCOM1-202ENST00000380569 TIAM1Q13009 1591 aa28.83■■■□□ 2.21
GCOM1-202ENST00000380569 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
GCOM1-202ENST00000380569 RRBP1Q9P2E9 1410 aaKnown RBP28.82■■■□□ 2.2
GCOM1-202ENST00000380569 P3H3Q8IVL6 736 aa28.76■■■□□ 2.19
GCOM1-202ENST00000380569 FHOD3Q2V2M9 1422 aa28.75■■■□□ 2.19
GCOM1-202ENST00000380569 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
GCOM1-202ENST00000380569 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
GCOM1-202ENST00000380569 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.19
GCOM1-202ENST00000380569 LRRC9Q6ZRR7 1453 aa28.7■■■□□ 2.19
GCOM1-202ENST00000380569 CFAP43Q8NDM7 1665 aa28.7■■■□□ 2.19
GCOM1-202ENST00000380569 FYCO1Q9BQS8 1478 aa28.69■■■□□ 2.18
GCOM1-202ENST00000380569 CCNB3Q8WWL7 1395 aa28.68■■■□□ 2.18
GCOM1-202ENST00000380569 CASKIN1Q8WXD9 1431 aa28.67■■■□□ 2.18
GCOM1-202ENST00000380569 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
GCOM1-202ENST00000380569 SAMD9Q5K651 1589 aa28.66■■■□□ 2.18
GCOM1-202ENST00000380569 FMN1Q68DA7 1419 aa28.64■■■□□ 2.17
GCOM1-202ENST00000380569 GRIN2BQ13224 1484 aa28.61■■■□□ 2.17
GCOM1-202ENST00000380569 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
GCOM1-202ENST00000380569 ATP1B4Q9UN42 357 aaPredicted RBP28.55■■■□□ 2.16
GCOM1-202ENST00000380569 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
GCOM1-202ENST00000380569 EIF4G3O43432 1585 aaKnown RBP28.55■■■□□ 2.16
GCOM1-202ENST00000380569 PHLDB1Q86UU1 1377 aa28.51■■■□□ 2.15
GCOM1-202ENST00000380569 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
GCOM1-202ENST00000380569 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
GCOM1-202ENST00000380569 DHX57Q6P158 1386 aaKnown RBP28.44■■■□□ 2.14
GCOM1-202ENST00000380569 LRRIQ1Q96JM4 1722 aa28.39■■■□□ 2.13
GCOM1-202ENST00000380569 ITGAEP38570 1179 aa28.38■■■□□ 2.13
GCOM1-202ENST00000380569 UGGT2Q9NYU1 1516 aa28.33■■■□□ 2.13
GCOM1-202ENST00000380569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.33■■■□□ 2.13
GCOM1-202ENST00000380569 MTUS2Q5JR59 1369 aa28.32■■■□□ 2.12
GCOM1-202ENST00000380569 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
GCOM1-202ENST00000380569 FAM50AQ14320 339 aaKnown RBP28.3■■■□□ 2.12
GCOM1-202ENST00000380569 KIAA0586Q9BVV6 1533 aa28.29■■■□□ 2.12
GCOM1-202ENST00000380569 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
GCOM1-202ENST00000380569 ZNF316A6NFI3 1004 aaPredicted RBP28.27■■■□□ 2.12
GCOM1-202ENST00000380569 RAB3GAP2Q9H2M9 1393 aa28.26■■■□□ 2.12
GCOM1-202ENST00000380569 CCDC18Q5T9S5 1454 aa28.26■■■□□ 2.11
GCOM1-202ENST00000380569 SETD5Q9C0A6 1442 aa28.25■■■□□ 2.11
GCOM1-202ENST00000380569 HECW1Q76N89 1606 aa28.24■■■□□ 2.11
GCOM1-202ENST00000380569 EHBP1L1Q8N3D4 1523 aa28.24■■■□□ 2.11
GCOM1-202ENST00000380569 FGD6Q6ZV73 1430 aa28.24■■■□□ 2.11
GCOM1-202ENST00000380569 DIEXFQ68CQ4 756 aaKnown RBP28.22■■■□□ 2.11
GCOM1-202ENST00000380569 FBLN2P98095 1184 aa28.21■■■□□ 2.11
GCOM1-202ENST00000380569 SUPT6HQ7KZ85 1726 aaKnown RBP28.2■■■□□ 2.11
GCOM1-202ENST00000380569 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.11
GCOM1-202ENST00000380569 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
GCOM1-202ENST00000380569 NCOA2Q15596 1464 aa28.2■■■□□ 2.1
GCOM1-202ENST00000380569 DISP1Q96F81 1524 aa28.16■■■□□ 2.1
GCOM1-202ENST00000380569 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
GCOM1-202ENST00000380569 EPRSP07814 1512 aaKnown RBP28.15■■■□□ 2.1
GCOM1-202ENST00000380569 MAGI3Q5TCQ9 1506 aa28.15■■■□□ 2.1
GCOM1-202ENST00000380569 MYOM3Q5VTT5 1437 aa28.15■■■□□ 2.1
GCOM1-202ENST00000380569 ARHGEF11O15085 1522 aa28.14■■■□□ 2.09
GCOM1-202ENST00000380569 CEP170Q5SW79 1584 aa28.09■■■□□ 2.09
GCOM1-202ENST00000380569 MAPKBP1O60336 1514 aa28.06■■■□□ 2.08
GCOM1-202ENST00000380569 CDK13Q14004 1512 aaKnown RBP28.05■■■□□ 2.08
GCOM1-202ENST00000380569 CHD1O14646 1710 aa28.02■■■□□ 2.08
GCOM1-202ENST00000380569 NUP160Q12769 1436 aa28.02■■■□□ 2.08
GCOM1-202ENST00000380569 PTPN23Q9H3S7 1636 aa28.01■■■□□ 2.07
GCOM1-202ENST00000380569 PTPRKQ15262 1439 aa27.99■■■□□ 2.07
GCOM1-202ENST00000380569 RAPGEF6Q8TEU7 1601 aa27.98■■■□□ 2.07
GCOM1-202ENST00000380569 TCOF1Q13428 1488 aaKnown RBP27.97■■■□□ 2.07
GCOM1-202ENST00000380569 NUP153P49790 1475 aaKnown RBP27.96■■■□□ 2.07
GCOM1-202ENST00000380569 HFM1A2PYH4 1435 aa27.95■■■□□ 2.06
GCOM1-202ENST00000380569 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
GCOM1-202ENST00000380569 CARMIL2Q6F5E8 1435 aa27.9■■■□□ 2.06
GCOM1-202ENST00000380569 ARID3CA6NKF2 412 aa27.9■■■□□ 2.06
GCOM1-202ENST00000380569 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
GCOM1-202ENST00000380569 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
GCOM1-202ENST00000380569 NAIPQ13075 1403 aa27.86■■■□□ 2.05
GCOM1-202ENST00000380569 CDK11AQ9UQ88 783 aaPredicted RBP27.83■■■□□ 2.05
GCOM1-202ENST00000380569 PLB1Q6P1J6 1458 aa27.81■■■□□ 2.04
GCOM1-202ENST00000380569 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
GCOM1-202ENST00000380569 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
GCOM1-202ENST00000380569 TIMELESSQ9UNS1 1208 aa27.77■■■□□ 2.04
GCOM1-202ENST00000380569 AKNAQ7Z591 1439 aa27.76■■■□□ 2.03
GCOM1-202ENST00000380569 TROQ12816 1431 aaPredicted RBP27.75■■■□□ 2.03
GCOM1-202ENST00000380569 CLASP1Q7Z460 1538 aa27.74■■■□□ 2.03
GCOM1-202ENST00000380569 GCC2Q8IWJ2 1684 aa27.74■■■□□ 2.03
GCOM1-202ENST00000380569 NEUROD1Q13562 356 aa27.71■■■□□ 2.03
GCOM1-202ENST00000380569 ABCA8O94911 1581 aa27.71■■■□□ 2.03
GCOM1-202ENST00000380569 PRG4Q92954 1404 aaPredicted RBP27.7■■■□□ 2.03
GCOM1-202ENST00000380569 RRP7BPQ9NSQ0 103 aa27.69■■■□□ 2.02
GCOM1-202ENST00000380569 CHIC2Q9UKJ5 165 aa27.69■■■□□ 2.02
GCOM1-202ENST00000380569 ADCY10Q96PN6 1610 aa27.68■■■□□ 2.02
GCOM1-202ENST00000380569 MIER1Q8N108 512 aa27.67■■■□□ 2.02
GCOM1-202ENST00000380569 DNMT1P26358 1616 aaKnown RBP27.64■■■□□ 2.02
GCOM1-202ENST00000380569 DAPK1P53355 1430 aa27.64■■■□□ 2.02
GCOM1-202ENST00000380569 ITSN2Q9NZM3 1697 aa27.62■■■□□ 2.01
GCOM1-202ENST00000380569 ROCK1Q13464 1354 aa27.61■■■□□ 2.01
GCOM1-202ENST00000380569 ABCC5O15440 1437 aa27.6■■■□□ 2.01
GCOM1-202ENST00000380569 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
GCOM1-202ENST00000380569 KIF14Q15058 1648 aa27.59■■■□□ 2.01
GCOM1-202ENST00000380569 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
GCOM1-202ENST00000380569 ATP10BO94823 1461 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms