RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
VPS16-202ENST00000380445 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
VPS16-202ENST00000380445 RRBP1Q9P2E9 1410 aaKnown RBP18.9■□□□□ 0.62
VPS16-202ENST00000380445 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
VPS16-202ENST00000380445 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
VPS16-202ENST00000380445 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
VPS16-202ENST00000380445 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.61e-9■■■■■ 26.8
VPS16-202ENST00000380445 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
VPS16-202ENST00000380445 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
VPS16-202ENST00000380445 FYCO1Q9BQS8 1478 aa18.81■□□□□ 0.6
VPS16-202ENST00000380445 P3H3Q8IVL6 736 aa18.81■□□□□ 0.6
VPS16-202ENST00000380445 FHOD3Q2V2M9 1422 aa18.81■□□□□ 0.6
VPS16-202ENST00000380445 FMN1Q68DA7 1419 aa18.8■□□□□ 0.6
VPS16-202ENST00000380445 PCF11O94913 1555 aaKnown RBP18.8■□□□□ 0.6
VPS16-202ENST00000380445 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
VPS16-202ENST00000380445 CASKIN1Q8WXD9 1431 aa18.79■□□□□ 0.6
VPS16-202ENST00000380445 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
VPS16-202ENST00000380445 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
VPS16-202ENST00000380445 CLSPNQ9HAW4 1339 aa18.76■□□□□ 0.59
VPS16-202ENST00000380445 SAMD9Q5K651 1589 aa18.75■□□□□ 0.59
VPS16-202ENST00000380445 WDR62O43379 1518 aa18.74■□□□□ 0.59
VPS16-202ENST00000380445 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
VPS16-202ENST00000380445 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
VPS16-202ENST00000380445 GRIN2BQ13224 1484 aa18.72■□□□□ 0.59
VPS16-202ENST00000380445 ADAMTS12P58397 1594 aa18.69■□□□□ 0.58
VPS16-202ENST00000380445 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
VPS16-202ENST00000380445 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
VPS16-202ENST00000380445 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
VPS16-202ENST00000380445 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
VPS16-202ENST00000380445 THOC2Q8NI27 1593 aaKnown RBP18.65■□□□□ 0.58
VPS16-202ENST00000380445 IQGAP2Q13576 1575 aa18.63■□□□□ 0.57
VPS16-202ENST00000380445 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
VPS16-202ENST00000380445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.57
VPS16-202ENST00000380445 ITGAEP38570 1179 aa18.61■□□□□ 0.57
VPS16-202ENST00000380445 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
VPS16-202ENST00000380445 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
VPS16-202ENST00000380445 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.57
VPS16-202ENST00000380445 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.56
VPS16-202ENST00000380445 CCDC18Q5T9S5 1454 aa18.55■□□□□ 0.56
VPS16-202ENST00000380445 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
VPS16-202ENST00000380445 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
VPS16-202ENST00000380445 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
VPS16-202ENST00000380445 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
VPS16-202ENST00000380445 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.56
VPS16-202ENST00000380445 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.55
VPS16-202ENST00000380445 HECW1Q76N89 1606 aa18.52■□□□□ 0.55
VPS16-202ENST00000380445 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
VPS16-202ENST00000380445 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
VPS16-202ENST00000380445 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
VPS16-202ENST00000380445 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
VPS16-202ENST00000380445 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
VPS16-202ENST00000380445 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
VPS16-202ENST00000380445 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
VPS16-202ENST00000380445 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
VPS16-202ENST00000380445 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
VPS16-202ENST00000380445 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
VPS16-202ENST00000380445 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
VPS16-202ENST00000380445 ARHGEF11O15085 1522 aa18.41■□□□□ 0.54
VPS16-202ENST00000380445 DISP1Q96F81 1524 aa18.4■□□□□ 0.54
VPS16-202ENST00000380445 MAPKBP1O60336 1514 aa18.37■□□□□ 0.53
VPS16-202ENST00000380445 MAGI3Q5TCQ9 1506 aa18.37■□□□□ 0.53
VPS16-202ENST00000380445 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
VPS16-202ENST00000380445 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
VPS16-202ENST00000380445 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.53
VPS16-202ENST00000380445 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
VPS16-202ENST00000380445 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
VPS16-202ENST00000380445 TCOF1Q13428 1488 aaKnown RBP18.32■□□□□ 0.52
VPS16-202ENST00000380445 NUP160Q12769 1436 aa18.32■□□□□ 0.52
VPS16-202ENST00000380445 FBLN2P98095 1184 aa18.31■□□□□ 0.52
VPS16-202ENST00000380445 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
VPS16-202ENST00000380445 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
VPS16-202ENST00000380445 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
VPS16-202ENST00000380445 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
VPS16-202ENST00000380445 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
VPS16-202ENST00000380445 NUP153P49790 1475 aaKnown RBP18.28■□□□□ 0.52
VPS16-202ENST00000380445 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
VPS16-202ENST00000380445 NAIPQ13075 1403 aa18.26■□□□□ 0.51
VPS16-202ENST00000380445 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
VPS16-202ENST00000380445 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
VPS16-202ENST00000380445 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
VPS16-202ENST00000380445 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
VPS16-202ENST00000380445 ACIN1Q9UKV3 1341 aaKnown RBP18.2■□□□□ 0.5
VPS16-202ENST00000380445 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
VPS16-202ENST00000380445 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
VPS16-202ENST00000380445 TROQ12816 1431 aaPredicted RBP18.18■□□□□ 0.5
VPS16-202ENST00000380445 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
VPS16-202ENST00000380445 MIER1Q8N108 512 aa18.17■□□□□ 0.5
VPS16-202ENST00000380445 PLB1Q6P1J6 1458 aa18.17■□□□□ 0.5
VPS16-202ENST00000380445 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
VPS16-202ENST00000380445 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
VPS16-202ENST00000380445 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
VPS16-202ENST00000380445 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
VPS16-202ENST00000380445 ADCY10Q96PN6 1610 aa18.11■□□□□ 0.49
VPS16-202ENST00000380445 ITSN2Q9NZM3 1697 aa18.11■□□□□ 0.49
VPS16-202ENST00000380445 DAPK1P53355 1430 aa18.11■□□□□ 0.49
VPS16-202ENST00000380445 ABCA8O94911 1581 aa18.11■□□□□ 0.49
VPS16-202ENST00000380445 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
VPS16-202ENST00000380445 PPP1R15AO75807 674 aaPredicted RBP18.1■□□□□ 0.49
VPS16-202ENST00000380445 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
VPS16-202ENST00000380445 PLEKHD1A6NEE1 506 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms