RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 NCAPD3P42695 1498 aa9.18□□□□□ -0.94
RIPK1-202ENST00000380409 WIZO95785 1651 aa9.17□□□□□ -0.94
RIPK1-202ENST00000380409 BAZ1AQ9NRL2 1556 aaPredicted RBP9.17□□□□□ -0.94
RIPK1-202ENST00000380409 DHX57Q6P158 1386 aaKnown RBP9.16□□□□□ -0.94
RIPK1-202ENST00000380409 SMARCA4P51532 1647 aa9.16□□□□□ -0.94
RIPK1-202ENST00000380409 CUX2O14529 1486 aa9.16□□□□□ -0.94
RIPK1-202ENST00000380409 PEG3Q9GZU2 1588 aa9.14□□□□□ -0.95
RIPK1-202ENST00000380409 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
RIPK1-202ENST00000380409 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
RIPK1-202ENST00000380409 TNIKQ9UKE5 1360 aa9.12□□□□□ -0.95
RIPK1-202ENST00000380409 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
RIPK1-202ENST00000380409 CNGB1Q14028 1251 aaPredicted RBP9.11□□□□□ -0.95
RIPK1-202ENST00000380409 CDK11AQ9UQ88 783 aaPredicted RBP9.11□□□□□ -0.95
RIPK1-202ENST00000380409 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
RIPK1-202ENST00000380409 NBR1Q14596 966 aa9.09□□□□□ -0.95
RIPK1-202ENST00000380409 EEA1Q15075 1411 aa9.08□□□□□ -0.96
RIPK1-202ENST00000380409 NEFLP07196 543 aa9.08□□□□□ -0.96
RIPK1-202ENST00000380409 CCER2I3L3R5 266 aa9.06□□□□□ -0.96
RIPK1-202ENST00000380409 USP35Q9P2H5 1018 aa9.06□□□□□ -0.96
RIPK1-202ENST00000380409 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
RIPK1-202ENST00000380409 PDE4CQ08493 712 aa9.05□□□□□ -0.96
RIPK1-202ENST00000380409 HOMEZQ8IX15 550 aa9.05□□□□□ -0.96
RIPK1-202ENST00000380409 IPO9Q96P70 1041 aaKnown RBP9.04□□□□□ -0.96
RIPK1-202ENST00000380409 PHF23Q9BUL5 403 aaPredicted RBP9.04□□□□□ -0.96
RIPK1-202ENST00000380409 FGD1P98174 961 aa9.03□□□□□ -0.96
RIPK1-202ENST00000380409 AAMPQ13685 434 aa9.03□□□□□ -0.96
RIPK1-202ENST00000380409 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
RIPK1-202ENST00000380409 CADPSQ9ULU8 1353 aa9.03□□□□□ -0.96
RIPK1-202ENST00000380409 BRPF3Q9ULD4 1205 aa9.02□□□□□ -0.97
RIPK1-202ENST00000380409 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
RIPK1-202ENST00000380409 FAM43AQ8N2R8 423 aa9.02□□□□□ -0.97
RIPK1-202ENST00000380409 WDR97A6NE52 1622 aa9□□□□□ -0.97
RIPK1-202ENST00000380409 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
RIPK1-202ENST00000380409 PPP4R2Q9NY27 417 aa9□□□□□ -0.97
RIPK1-202ENST00000380409 KIF21BO75037 1637 aa9□□□□□ -0.97
RIPK1-202ENST00000380409 GLIPR1L2Q4G1C9 344 aa9□□□□□ -0.97
RIPK1-202ENST00000380409 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
RIPK1-202ENST00000380409 POLR3GLQ9BT43 218 aa8.99□□□□□ -0.97
RIPK1-202ENST00000380409 PDS5BQ9NTI5 1447 aa8.99□□□□□ -0.97
RIPK1-202ENST00000380409 VSIG10Q8N0Z9 540 aa8.97□□□□□ -0.97
RIPK1-202ENST00000380409 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.97
RIPK1-202ENST00000380409 BCL11BQ9C0K0 894 aaPredicted RBP8.96□□□□□ -0.98
RIPK1-202ENST00000380409 FANCD2Q9BXW9 1451 aa8.95□□□□□ -0.98
RIPK1-202ENST00000380409 RBM10P98175 930 aaKnown RBP8.95□□□□□ -0.98
RIPK1-202ENST00000380409 VPS8Q8N3P4 1428 aa8.94□□□□□ -0.98
RIPK1-202ENST00000380409 KCNA4P22459 653 aa8.94□□□□□ -0.98
RIPK1-202ENST00000380409 RRBP1Q9P2E9 1410 aaKnown RBP8.94□□□□□ -0.98
RIPK1-202ENST00000380409 TOP2AP11388 1531 aaKnown RBP8.94□□□□□ -0.98
RIPK1-202ENST00000380409 FAM50AQ14320 339 aaKnown RBP8.94□□□□□ -0.98
RIPK1-202ENST00000380409 PRDM4Q9UKN5 801 aa8.94□□□□□ -0.98
RIPK1-202ENST00000380409 TDRD9Q8NDG6 1382 aaKnown RBP8.94□□□□□ -0.98
RIPK1-202ENST00000380409 GOLGA3Q08378 1498 aa8.93□□□□□ -0.98
RIPK1-202ENST00000380409 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
RIPK1-202ENST00000380409 RRP9O43818 475 aaKnown RBP8.93□□□□□ -0.98
RIPK1-202ENST00000380409 TRIM52Q96A61 297 aa8.92□□□□□ -0.98
RIPK1-202ENST00000380409 CLIP1P30622 1438 aa8.92□□□□□ -0.98
RIPK1-202ENST00000380409 HAP1P54257 671 aaPredicted RBP8.92□□□□□ -0.98
RIPK1-202ENST00000380409 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
RIPK1-202ENST00000380409 DHX37Q8IY37 1157 aaKnown RBP8.92□□□□□ -0.98
RIPK1-202ENST00000380409 CENPJQ9HC77 1338 aaPredicted RBP8.92□□□□□ -0.98
RIPK1-202ENST00000380409 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
RIPK1-202ENST00000380409 GSE1Q14687 1217 aa8.91□□□□□ -0.98
RIPK1-202ENST00000380409 HMGXB3Q12766 1538 aa8.91□□□□□ -0.98
RIPK1-202ENST00000380409 CEP164Q9UPV0 1460 aa8.91□□□□□ -0.98
RIPK1-202ENST00000380409 POLR1AO95602 1720 aaPredicted RBP8.9□□□□□ -0.99
RIPK1-202ENST00000380409 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
RIPK1-202ENST00000380409 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
RIPK1-202ENST00000380409 VIRMAQ69YN4 1812 aaKnown RBP8.89□□□□□ -0.99
RIPK1-202ENST00000380409 CHMP7Q8WUX9 453 aaPredicted RBP8.89□□□□□ -0.99
RIPK1-202ENST00000380409 CHMP4AQ9BY43 222 aa8.89□□□□□ -0.99
RIPK1-202ENST00000380409 ANP32AP39687 249 aaKnown RBP8.88□□□□□ -0.99
RIPK1-202ENST00000380409 DCAF11Q8TEB1 546 aa8.88□□□□□ -0.99
RIPK1-202ENST00000380409 ARID3CA6NKF2 412 aa8.88□□□□□ -0.99
RIPK1-202ENST00000380409 NEFMP07197 916 aa8.87□□□□□ -0.99
RIPK1-202ENST00000380409 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
RIPK1-202ENST00000380409 SYNJ1O43426 1573 aa8.87□□□□□ -0.99
RIPK1-202ENST00000380409 CYB5RLQ6IPT4 315 aa8.87□□□□□ -0.99
RIPK1-202ENST00000380409 SOGA1O94964 1423 aa8.87□□□□□ -0.99
RIPK1-202ENST00000380409 IRX6P78412 446 aaPredicted RBP8.86□□□□□ -0.99
RIPK1-202ENST00000380409 RRAGDQ9NQL2 400 aaPredicted RBP8.86□□□□□ -0.99
RIPK1-202ENST00000380409 A0A0U1RQG5 324 aaPredicted RBP8.85□□□□□ -0.99
RIPK1-202ENST00000380409 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
RIPK1-202ENST00000380409 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
RIPK1-202ENST00000380409 RAD54L2Q9Y4B4 1467 aa8.85□□□□□ -0.99
RIPK1-202ENST00000380409 ABCA5Q8WWZ7 1642 aa8.85□□□□□ -0.99
RIPK1-202ENST00000380409 PPM1GO15355 546 aaPredicted RBP8.84□□□□□ -0.99
RIPK1-202ENST00000380409 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
RIPK1-202ENST00000380409 FRAT1Q92837 279 aaPredicted RBP8.84□□□□□ -0.99
RIPK1-202ENST00000380409 KDM5BQ9UGL1 1544 aa8.84□□□□□ -0.99
RIPK1-202ENST00000380409 CALD1Q05682 793 aaKnown RBP8.84□□□□□ -0.99
RIPK1-202ENST00000380409 NCOA2Q15596 1464 aa8.84□□□□□ -0.99
RIPK1-202ENST00000380409 RUSC2Q8N2Y8 1516 aa8.84□□□□□ -0.99
RIPK1-202ENST00000380409 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
RIPK1-202ENST00000380409 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
RIPK1-202ENST00000380409 CFTRP13569 1480 aa8.83□□□□□ -1
RIPK1-202ENST00000380409 DDX10Q13206 875 aaKnown RBP8.82□□□□□ -1
RIPK1-202ENST00000380409 OSCARQ8IYS5 282 aa8.82□□□□□ -1
RIPK1-202ENST00000380409 HSP90AA2PQ14568 343 aaPredicted RBP8.82□□□□□ -1
RIPK1-202ENST00000380409 DNAJC5Q9H3Z4 198 aa8.81□□□□□ -1
RIPK1-202ENST00000380409 MRC2Q9UBG0 1479 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms