RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
HERC6-203ENST00000380265 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
HERC6-203ENST00000380265 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
HERC6-203ENST00000380265 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
HERC6-203ENST00000380265 B4GALNT3Q6L9W6 998 aa16.83■□□□□ 0.28
HERC6-203ENST00000380265 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
HERC6-203ENST00000380265 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
HERC6-203ENST00000380265 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
HERC6-203ENST00000380265 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
HERC6-203ENST00000380265 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
HERC6-203ENST00000380265 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
HERC6-203ENST00000380265 FAM9BQ8IZU0 186 aa16.78■□□□□ 0.28
HERC6-203ENST00000380265 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
HERC6-203ENST00000380265 CUX2O14529 1486 aa16.75■□□□□ 0.27
HERC6-203ENST00000380265 NOP58Q9Y2X3 529 aaKnown RBP16.75■□□□□ 0.27
HERC6-203ENST00000380265 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
HERC6-203ENST00000380265 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
HERC6-203ENST00000380265 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
HERC6-203ENST00000380265 ANP32AP39687 249 aaKnown RBP16.67■□□□□ 0.26
HERC6-203ENST00000380265 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
HERC6-203ENST00000380265 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
HERC6-203ENST00000380265 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
HERC6-203ENST00000380265 MRS2Q9HD23 443 aa16.66■□□□□ 0.26
HERC6-203ENST00000380265 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
HERC6-203ENST00000380265 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.26
HERC6-203ENST00000380265 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
HERC6-203ENST00000380265 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
HERC6-203ENST00000380265 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
HERC6-203ENST00000380265 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
HERC6-203ENST00000380265 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
HERC6-203ENST00000380265 NPM2Q86SE8 214 aaKnown RBP16.61■□□□□ 0.25
HERC6-203ENST00000380265 CCDC136Q96JN2 1154 aa16.6■□□□□ 0.25
HERC6-203ENST00000380265 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
HERC6-203ENST00000380265 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
HERC6-203ENST00000380265 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
HERC6-203ENST00000380265 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
HERC6-203ENST00000380265 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
HERC6-203ENST00000380265 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
HERC6-203ENST00000380265 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
HERC6-203ENST00000380265 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
HERC6-203ENST00000380265 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
HERC6-203ENST00000380265 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
HERC6-203ENST00000380265 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
HERC6-203ENST00000380265 IL27Q8NEV9 243 aa16.5■□□□□ 0.23
HERC6-203ENST00000380265 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
HERC6-203ENST00000380265 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
HERC6-203ENST00000380265 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
HERC6-203ENST00000380265 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
HERC6-203ENST00000380265 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
HERC6-203ENST00000380265 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
HERC6-203ENST00000380265 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
HERC6-203ENST00000380265 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
HERC6-203ENST00000380265 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
HERC6-203ENST00000380265 NEFMP07197 916 aa16.42■□□□□ 0.22
HERC6-203ENST00000380265 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
HERC6-203ENST00000380265 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
HERC6-203ENST00000380265 CUX1P39880 1505 aa16.41■□□□□ 0.22
HERC6-203ENST00000380265 IGF1RP08069 1367 aa16.4■□□□□ 0.22
HERC6-203ENST00000380265 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
HERC6-203ENST00000380265 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
HERC6-203ENST00000380265 FOXD1Q16676 465 aa16.39■□□□□ 0.22
HERC6-203ENST00000380265 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
HERC6-203ENST00000380265 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
HERC6-203ENST00000380265 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
HERC6-203ENST00000380265 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
HERC6-203ENST00000380265 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
HERC6-203ENST00000380265 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
HERC6-203ENST00000380265 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
HERC6-203ENST00000380265 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
HERC6-203ENST00000380265 MAP3K1Q13233 1512 aa16.34■□□□□ 0.21
HERC6-203ENST00000380265 BICRAQ9NZM4 1560 aa16.33■□□□□ 0.2
HERC6-203ENST00000380265 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
HERC6-203ENST00000380265 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
HERC6-203ENST00000380265 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
HERC6-203ENST00000380265 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
HERC6-203ENST00000380265 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
HERC6-203ENST00000380265 ARID3CA6NKF2 412 aa16.29■□□□□ 0.2
HERC6-203ENST00000380265 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
HERC6-203ENST00000380265 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
HERC6-203ENST00000380265 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.2
HERC6-203ENST00000380265 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
HERC6-203ENST00000380265 KIF7Q2M1P5 1343 aa16.27■□□□□ 0.19
HERC6-203ENST00000380265 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
HERC6-203ENST00000380265 NAIPQ13075 1403 aa16.25■□□□□ 0.19
HERC6-203ENST00000380265 PDE4AP27815 886 aa16.24■□□□□ 0.19
HERC6-203ENST00000380265 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
HERC6-203ENST00000380265 EXOC6Q8TAG9 804 aa16.24■□□□□ 0.19
HERC6-203ENST00000380265 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
HERC6-203ENST00000380265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.19
HERC6-203ENST00000380265 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
HERC6-203ENST00000380265 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
HERC6-203ENST00000380265 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
HERC6-203ENST00000380265 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
HERC6-203ENST00000380265 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
HERC6-203ENST00000380265 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
HERC6-203ENST00000380265 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
HERC6-203ENST00000380265 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
HERC6-203ENST00000380265 NCOA2Q15596 1464 aa16.18■□□□□ 0.18
HERC6-203ENST00000380265 SLC4A3P48751 1232 aa16.17■□□□□ 0.18
HERC6-203ENST00000380265 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms