RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.11
SMAD9-202ENST00000379826 CHIC2Q9UKJ5 165 aa15.77■□□□□ 0.11
SMAD9-202ENST00000379826 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
SMAD9-202ENST00000379826 KIF27Q86VH2 1401 aa15.76■□□□□ 0.11
SMAD9-202ENST00000379826 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
SMAD9-202ENST00000379826 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
SMAD9-202ENST00000379826 KIF21BO75037 1637 aa15.68■□□□□ 0.1
SMAD9-202ENST00000379826 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
SMAD9-202ENST00000379826 RRP7BPQ9NSQ0 103 aa15.66■□□□□ 0.1
SMAD9-202ENST00000379826 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
SMAD9-202ENST00000379826 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
SMAD9-202ENST00000379826 SETD5Q9C0A6 1442 aa15.65■□□□□ 0.1
SMAD9-202ENST00000379826 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
SMAD9-202ENST00000379826 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
SMAD9-202ENST00000379826 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
SMAD9-202ENST00000379826 CUX2O14529 1486 aa15.61■□□□□ 0.09
SMAD9-202ENST00000379826 NBR1Q14596 966 aa15.6■□□□□ 0.09
SMAD9-202ENST00000379826 MRS2Q9HD23 443 aa15.6■□□□□ 0.09
SMAD9-202ENST00000379826 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
SMAD9-202ENST00000379826 NPM2Q86SE8 214 aaKnown RBP15.58■□□□□ 0.09
SMAD9-202ENST00000379826 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
SMAD9-202ENST00000379826 ZNF777Q9ULD5 760 aaPredicted RBP15.56■□□□□ 0.08
SMAD9-202ENST00000379826 CARMIL1Q5VZK9 1371 aa15.55■□□□□ 0.08
SMAD9-202ENST00000379826 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
SMAD9-202ENST00000379826 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
SMAD9-202ENST00000379826 EIF4G2P78344 907 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMAD9-202ENST00000379826 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
SMAD9-202ENST00000379826 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
SMAD9-202ENST00000379826 ANP32AP39687 249 aaKnown RBP15.52■□□□□ 0.07
SMAD9-202ENST00000379826 BCL11AQ9H165 835 aa15.52■□□□□ 0.07
SMAD9-202ENST00000379826 CCER2I3L3R5 266 aa15.5■□□□□ 0.07
SMAD9-202ENST00000379826 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
SMAD9-202ENST00000379826 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
SMAD9-202ENST00000379826 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-202ENST00000379826 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
SMAD9-202ENST00000379826 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
SMAD9-202ENST00000379826 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
SMAD9-202ENST00000379826 HSPA5P11021 654 aaKnown RBP15.45■□□□□ 0.06
SMAD9-202ENST00000379826 FOXD1Q16676 465 aa15.44■□□□□ 0.06
SMAD9-202ENST00000379826 FHOD3Q2V2M9 1422 aa15.44■□□□□ 0.06
SMAD9-202ENST00000379826 PPP4R2Q9NY27 417 aa15.41■□□□□ 0.06
SMAD9-202ENST00000379826 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
SMAD9-202ENST00000379826 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
SMAD9-202ENST00000379826 TMC1Q8TDI8 760 aa15.39■□□□□ 0.05
SMAD9-202ENST00000379826 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
SMAD9-202ENST00000379826 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
SMAD9-202ENST00000379826 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
SMAD9-202ENST00000379826 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
SMAD9-202ENST00000379826 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
SMAD9-202ENST00000379826 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
SMAD9-202ENST00000379826 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
SMAD9-202ENST00000379826 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
SMAD9-202ENST00000379826 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
SMAD9-202ENST00000379826 IGF1RP08069 1367 aa15.3■□□□□ 0.04
SMAD9-202ENST00000379826 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-202ENST00000379826 NOP58Q9Y2X3 529 aaKnown RBP15.29■□□□□ 0.04
SMAD9-202ENST00000379826 CUX1P39880 1505 aa15.28■□□□□ 0.04
SMAD9-202ENST00000379826 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
SMAD9-202ENST00000379826 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.04
SMAD9-202ENST00000379826 DEKP35659 375 aaKnown RBP15.25■□□□□ 0.03
SMAD9-202ENST00000379826 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
SMAD9-202ENST00000379826 CYB5RLQ6IPT4 315 aa15.24■□□□□ 0.03
SMAD9-202ENST00000379826 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
SMAD9-202ENST00000379826 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
SMAD9-202ENST00000379826 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
SMAD9-202ENST00000379826 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
SMAD9-202ENST00000379826 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
SMAD9-202ENST00000379826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMAD9-202ENST00000379826 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
SMAD9-202ENST00000379826 LAS1LQ9Y4W2 734 aaKnown RBP15.22■□□□□ 0.03
SMAD9-202ENST00000379826 TIAM1Q13009 1591 aa15.21■□□□□ 0.03
SMAD9-202ENST00000379826 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.03
SMAD9-202ENST00000379826 CARD11Q9BXL7 1154 aa15.2■□□□□ 0.02
SMAD9-202ENST00000379826 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
SMAD9-202ENST00000379826 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
SMAD9-202ENST00000379826 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
SMAD9-202ENST00000379826 RTN4Q9NQC3 1192 aaKnown RBP15.17■□□□□ 0.02
SMAD9-202ENST00000379826 FGD6Q6ZV73 1430 aa15.16■□□□□ 0.02
SMAD9-202ENST00000379826 A0A0G2JS52 829 aa15.16■□□□□ 0.02
SMAD9-202ENST00000379826 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
SMAD9-202ENST00000379826 RGL3Q3MIN7 710 aa15.16■□□□□ 0.02
SMAD9-202ENST00000379826 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
SMAD9-202ENST00000379826 HAP1P54257 671 aaPredicted RBP15.14■□□□□ 0.01
SMAD9-202ENST00000379826 WASHC2AQ641Q2 1341 aa15.14■□□□□ 0.01
SMAD9-202ENST00000379826 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
SMAD9-202ENST00000379826 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
SMAD9-202ENST00000379826 CC2D1BQ5T0F9 858 aaKnown RBP15.12■□□□□ 0.01
SMAD9-202ENST00000379826 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
SMAD9-202ENST00000379826 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
SMAD9-202ENST00000379826 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
SMAD9-202ENST00000379826 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
SMAD9-202ENST00000379826 CCDC184Q52MB2 194 aa15.1■□□□□ 0.01
SMAD9-202ENST00000379826 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
SMAD9-202ENST00000379826 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
SMAD9-202ENST00000379826 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
SMAD9-202ENST00000379826 MLECQ14165 292 aa15.1■□□□□ 0.01
SMAD9-202ENST00000379826 PCF11O94913 1555 aaKnown RBP15.1■□□□□ 0.01
SMAD9-202ENST00000379826 PEG3Q9GZU2 1588 aa15.1■□□□□ 0.01
SMAD9-202ENST00000379826 NEFMP07197 916 aa15.09■□□□□ 0.01
SMAD9-202ENST00000379826 MSH5O43196 834 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms