RNA–Protein interactions for RNA: ENST00000379145.5

PCYT1B-203, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 1 (best) BASIC

Gene PCYT1B, Length 5,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-203ENST00000379145 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
PCYT1B-203ENST00000379145 GLIPR1L2Q4G1C9 344 aa12.84□□□□□ -0.35
PCYT1B-203ENST00000379145 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
PCYT1B-203ENST00000379145 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
PCYT1B-203ENST00000379145 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
PCYT1B-203ENST00000379145 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
PCYT1B-203ENST00000379145 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
PCYT1B-203ENST00000379145 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
PCYT1B-203ENST00000379145 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
PCYT1B-203ENST00000379145 KANK4Q5T7N3 995 aaPredicted RBP12.77□□□□□ -0.36
PCYT1B-203ENST00000379145 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
PCYT1B-203ENST00000379145 PPM1GO15355 546 aaPredicted RBP12.76□□□□□ -0.37
PCYT1B-203ENST00000379145 ESF1Q9H501 851 aaKnown RBP12.76□□□□□ -0.37
PCYT1B-203ENST00000379145 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
PCYT1B-203ENST00000379145 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
PCYT1B-203ENST00000379145 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
PCYT1B-203ENST00000379145 CCNB3Q8WWL7 1395 aa12.73□□□□□ -0.37
PCYT1B-203ENST00000379145 RAB3GAP2Q9H2M9 1393 aa12.71□□□□□ -0.38
PCYT1B-203ENST00000379145 PPP1R15AO75807 674 aaPredicted RBP12.7□□□□□ -0.38
PCYT1B-203ENST00000379145 ARXQ96QS3 562 aa12.68□□□□□ -0.38
PCYT1B-203ENST00000379145 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCYT1B-203ENST00000379145 WIZO95785 1651 aa12.67□□□□□ -0.38
PCYT1B-203ENST00000379145 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
PCYT1B-203ENST00000379145 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
PCYT1B-203ENST00000379145 TIMELESSQ9UNS1 1208 aa12.65□□□□□ -0.38
PCYT1B-203ENST00000379145 EIF4G2P78344 907 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCYT1B-203ENST00000379145 FBLN2P98095 1184 aa12.64□□□□□ -0.39
PCYT1B-203ENST00000379145 UBE2Q2Q8WVN8 375 aa12.63□□□□□ -0.39
PCYT1B-203ENST00000379145 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
PCYT1B-203ENST00000379145 SETD5Q9C0A6 1442 aa12.63□□□□□ -0.39
PCYT1B-203ENST00000379145 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
PCYT1B-203ENST00000379145 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
PCYT1B-203ENST00000379145 BRPF3Q9ULD4 1205 aa12.61□□□□□ -0.39
PCYT1B-203ENST00000379145 NAP1L5Q96NT1 182 aaPredicted RBP12.6□□□□□ -0.39
PCYT1B-203ENST00000379145 TMC1Q8TDI8 760 aa12.59□□□□□ -0.39
PCYT1B-203ENST00000379145 GSE1Q14687 1217 aa12.58□□□□□ -0.39
PCYT1B-203ENST00000379145 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
PCYT1B-203ENST00000379145 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
PCYT1B-203ENST00000379145 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
PCYT1B-203ENST00000379145 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
PCYT1B-203ENST00000379145 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
PCYT1B-203ENST00000379145 TCERG1O14776 1098 aaKnown RBP12.54□□□□□ -0.4
PCYT1B-203ENST00000379145 PDE4AP27815 886 aa12.52□□□□□ -0.41
PCYT1B-203ENST00000379145 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
PCYT1B-203ENST00000379145 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCYT1B-203ENST00000379145 NUDCQ9Y266 331 aa12.52□□□□□ -0.41
PCYT1B-203ENST00000379145 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
PCYT1B-203ENST00000379145 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
PCYT1B-203ENST00000379145 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
PCYT1B-203ENST00000379145 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
PCYT1B-203ENST00000379145 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
PCYT1B-203ENST00000379145 KIF21BO75037 1637 aa12.49□□□□□ -0.41
PCYT1B-203ENST00000379145 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
PCYT1B-203ENST00000379145 FRAT1Q92837 279 aaPredicted RBP12.47□□□□□ -0.41
PCYT1B-203ENST00000379145 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
PCYT1B-203ENST00000379145 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.41
PCYT1B-203ENST00000379145 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
PCYT1B-203ENST00000379145 CCDC184Q52MB2 194 aa12.45□□□□□ -0.42
PCYT1B-203ENST00000379145 RRP7BPQ9NSQ0 103 aa12.45□□□□□ -0.42
PCYT1B-203ENST00000379145 ARID4BQ4LE39 1312 aaPredicted RBP12.44□□□□□ -0.42
PCYT1B-203ENST00000379145 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
PCYT1B-203ENST00000379145 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
PCYT1B-203ENST00000379145 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
PCYT1B-203ENST00000379145 EXOC6Q8TAG9 804 aa12.43□□□□□ -0.42
PCYT1B-203ENST00000379145 RGS3P49796 1198 aa12.42□□□□□ -0.42
PCYT1B-203ENST00000379145 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
PCYT1B-203ENST00000379145 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
PCYT1B-203ENST00000379145 NACADO15069 1562 aa12.41□□□□□ -0.42
PCYT1B-203ENST00000379145 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
PCYT1B-203ENST00000379145 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
PCYT1B-203ENST00000379145 BECN1Q14457 450 aa12.4□□□□□ -0.42
PCYT1B-203ENST00000379145 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
PCYT1B-203ENST00000379145 WASHC2AQ641Q2 1341 aa12.39□□□□□ -0.43
PCYT1B-203ENST00000379145 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
PCYT1B-203ENST00000379145 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
PCYT1B-203ENST00000379145 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
PCYT1B-203ENST00000379145 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
PCYT1B-203ENST00000379145 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
PCYT1B-203ENST00000379145 MS4A1P11836 297 aa12.35□□□□□ -0.43
PCYT1B-203ENST00000379145 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
PCYT1B-203ENST00000379145 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
PCYT1B-203ENST00000379145 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
PCYT1B-203ENST00000379145 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
PCYT1B-203ENST00000379145 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.33□□□□□ -0.44
PCYT1B-203ENST00000379145 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
PCYT1B-203ENST00000379145 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
PCYT1B-203ENST00000379145 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
PCYT1B-203ENST00000379145 FRAT2O75474 233 aaPredicted RBP12.33□□□□□ -0.44
PCYT1B-203ENST00000379145 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
PCYT1B-203ENST00000379145 KIF27Q86VH2 1401 aa12.32□□□□□ -0.44
PCYT1B-203ENST00000379145 ARID3CA6NKF2 412 aa12.32□□□□□ -0.44
PCYT1B-203ENST00000379145 FOXD1Q16676 465 aa12.32□□□□□ -0.44
PCYT1B-203ENST00000379145 PLIN1O60240 522 aa12.31□□□□□ -0.44
PCYT1B-203ENST00000379145 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
PCYT1B-203ENST00000379145 ARAP1Q96P48 1450 aa12.3□□□□□ -0.44
PCYT1B-203ENST00000379145 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
PCYT1B-203ENST00000379145 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
PCYT1B-203ENST00000379145 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
PCYT1B-203ENST00000379145 GOLGA6L3A6NEY3 463 aa12.29□□□□□ -0.44
PCYT1B-203ENST00000379145 WASHC2CQ9Y4E1 1318 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms