RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 RRBP1Q9P2E9 1410 aaKnown RBP32.27■■■□□ 2.76
CNTFR-202ENST00000378980 TDRD9Q8NDG6 1382 aaKnown RBP32.27■■■□□ 2.76
CNTFR-202ENST00000378980 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.75
CNTFR-202ENST00000378980 PCF11O94913 1555 aaKnown RBP32.2■■■□□ 2.74
CNTFR-202ENST00000378980 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
CNTFR-202ENST00000378980 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
CNTFR-202ENST00000378980 FHOD3Q2V2M9 1422 aa32.14■■■□□ 2.74
CNTFR-202ENST00000378980 LRRC9Q6ZRR7 1453 aa32.11■■■□□ 2.73
CNTFR-202ENST00000378980 CCNB3Q8WWL7 1395 aa32.1■■■□□ 2.73
CNTFR-202ENST00000378980 PBRM1Q86U86 1689 aa32.1■■■□□ 2.73
CNTFR-202ENST00000378980 P3H3Q8IVL6 736 aa32.09■■■□□ 2.73
CNTFR-202ENST00000378980 FYCO1Q9BQS8 1478 aa32.09■■■□□ 2.73
CNTFR-202ENST00000378980 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.73
CNTFR-202ENST00000378980 SAMD9Q5K651 1589 aa32.05■■■□□ 2.72
CNTFR-202ENST00000378980 CASKIN1Q8WXD9 1431 aa32.04■■■□□ 2.72
CNTFR-202ENST00000378980 FMN1Q68DA7 1419 aa31.99■■■□□ 2.71
CNTFR-202ENST00000378980 WDR62O43379 1518 aa31.97■■■□□ 2.71
CNTFR-202ENST00000378980 ADAMTS12P58397 1594 aa31.94■■■□□ 2.7
CNTFR-202ENST00000378980 SNAPC4Q5SXM2 1469 aa31.93■■■□□ 2.7
CNTFR-202ENST00000378980 PHLDB1Q86UU1 1377 aa31.9■■■□□ 2.7
CNTFR-202ENST00000378980 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
CNTFR-202ENST00000378980 DHX57Q6P158 1386 aaKnown RBP31.89■■■□□ 2.7
CNTFR-202ENST00000378980 CLSPNQ9HAW4 1339 aa31.88■■■□□ 2.69
CNTFR-202ENST00000378980 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
CNTFR-202ENST00000378980 ATP1B4Q9UN42 357 aaPredicted RBP31.87■■■□□ 2.69
CNTFR-202ENST00000378980 LRRIQ1Q96JM4 1722 aa31.81■■■□□ 2.68
CNTFR-202ENST00000378980 THOC2Q8NI27 1593 aaKnown RBP31.8■■■□□ 2.68
CNTFR-202ENST00000378980 ZNF608Q9ULD9 1512 aaPredicted RBP31.79■■■□□ 2.68
CNTFR-202ENST00000378980 IQGAP2Q13576 1575 aa31.79■■■□□ 2.68
CNTFR-202ENST00000378980 ITGAEP38570 1179 aa31.74■■■□□ 2.67
CNTFR-202ENST00000378980 ZNF316A6NFI3 1004 aaPredicted RBP31.72■■■□□ 2.67
CNTFR-202ENST00000378980 ERCC6Q03468 1493 aa31.71■■■□□ 2.67
CNTFR-202ENST00000378980 DIEXFQ68CQ4 756 aaKnown RBP31.71■■■□□ 2.67
CNTFR-202ENST00000378980 EIF4G3O43432 1585 aaKnown RBP31.69■■■□□ 2.66
CNTFR-202ENST00000378980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.66■■■□□ 2.66
CNTFR-202ENST00000378980 RAB3GAP2Q9H2M9 1393 aa31.66■■■□□ 2.66
CNTFR-202ENST00000378980 MTUS2Q5JR59 1369 aa31.64■■■□□ 2.66
CNTFR-202ENST00000378980 FAM50AQ14320 339 aaKnown RBP31.64■■■□□ 2.66
CNTFR-202ENST00000378980 SETD5Q9C0A6 1442 aa31.62■■■□□ 2.65
CNTFR-202ENST00000378980 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
CNTFR-202ENST00000378980 EHBP1L1Q8N3D4 1523 aa31.59■■■□□ 2.65
CNTFR-202ENST00000378980 FGD6Q6ZV73 1430 aa31.59■■■□□ 2.65
CNTFR-202ENST00000378980 CCDC18Q5T9S5 1454 aa31.59■■■□□ 2.65
CNTFR-202ENST00000378980 HECW1Q76N89 1606 aa31.58■■■□□ 2.65
CNTFR-202ENST00000378980 SUPT6HQ7KZ85 1726 aaKnown RBP31.57■■■□□ 2.64
CNTFR-202ENST00000378980 NCOA2Q15596 1464 aa31.53■■■□□ 2.64
CNTFR-202ENST00000378980 KIAA0586Q9BVV6 1533 aa31.53■■■□□ 2.64
CNTFR-202ENST00000378980 GRIN2AQ12879 1464 aa31.53■■■□□ 2.64
CNTFR-202ENST00000378980 MAPKBP1O60336 1514 aa31.49■■■□□ 2.63
CNTFR-202ENST00000378980 MAGI3Q5TCQ9 1506 aa31.49■■■□□ 2.63
CNTFR-202ENST00000378980 MAGI1Q96QZ7 1491 aaPredicted RBP31.49■■■□□ 2.63
CNTFR-202ENST00000378980 ARHGEF11O15085 1522 aa31.47■■■□□ 2.63
CNTFR-202ENST00000378980 MYOM3Q5VTT5 1437 aa31.47■■■□□ 2.63
CNTFR-202ENST00000378980 KIAA0556O60303 1618 aa31.46■■■□□ 2.63
CNTFR-202ENST00000378980 EPRSP07814 1512 aaKnown RBP31.45■■■□□ 2.63
CNTFR-202ENST00000378980 DISP1Q96F81 1524 aa31.42■■■□□ 2.62
CNTFR-202ENST00000378980 SYNJ2O15056 1496 aa31.39■■■□□ 2.61
CNTFR-202ENST00000378980 CDK13Q14004 1512 aaKnown RBP31.36■■■□□ 2.61
CNTFR-202ENST00000378980 PTPN23Q9H3S7 1636 aa31.36■■■□□ 2.61
CNTFR-202ENST00000378980 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
CNTFR-202ENST00000378980 PTPRKQ15262 1439 aa31.31■■■□□ 2.6
CNTFR-202ENST00000378980 HFM1A2PYH4 1435 aa31.28■■■□□ 2.6
CNTFR-202ENST00000378980 TCOF1Q13428 1488 aaKnown RBP31.27■■■□□ 2.6
CNTFR-202ENST00000378980 RAPGEF6Q8TEU7 1601 aa31.27■■■□□ 2.6
CNTFR-202ENST00000378980 CHMP7Q8WUX9 453 aaPredicted RBP31.27■■■□□ 2.6
CNTFR-202ENST00000378980 NUP160Q12769 1436 aa31.23■■■□□ 2.59
CNTFR-202ENST00000378980 NUP153P49790 1475 aaKnown RBP31.23■■■□□ 2.59
CNTFR-202ENST00000378980 NAIPQ13075 1403 aa31.18■■■□□ 2.58
CNTFR-202ENST00000378980 MIA2Q96PC5 1412 aa31.18■■■□□ 2.58
CNTFR-202ENST00000378980 ARID3CA6NKF2 412 aa31.13■■■□□ 2.57
CNTFR-202ENST00000378980 FBLN2P98095 1184 aa31.13■■■□□ 2.57
CNTFR-202ENST00000378980 UACAQ9BZF9 1416 aa31.12■■■□□ 2.57
CNTFR-202ENST00000378980 GCC2Q8IWJ2 1684 aa31.11■■■□□ 2.57
CNTFR-202ENST00000378980 MIER1Q8N108 512 aa31.09■■■□□ 2.57
CNTFR-202ENST00000378980 SIN3AQ96ST3 1273 aa31.09■■■□□ 2.57
CNTFR-202ENST00000378980 CARMIL2Q6F5E8 1435 aa31.08■■■□□ 2.57
CNTFR-202ENST00000378980 AKNAQ7Z591 1439 aa31.06■■■□□ 2.56
CNTFR-202ENST00000378980 TIMELESSQ9UNS1 1208 aa31.05■■■□□ 2.56
CNTFR-202ENST00000378980 JPH4Q96JJ6 628 aa31.04■■■□□ 2.56
CNTFR-202ENST00000378980 PLB1Q6P1J6 1458 aa31.03■■■□□ 2.56
CNTFR-202ENST00000378980 ACIN1Q9UKV3 1341 aaKnown RBP31.02■■■□□ 2.56
CNTFR-202ENST00000378980 NEUROD1Q13562 356 aa31.02■■■□□ 2.56
CNTFR-202ENST00000378980 CDK11AQ9UQ88 783 aaPredicted RBP31.01■■■□□ 2.56
CNTFR-202ENST00000378980 CENPBP07199 599 aaPredicted RBP31■■■□□ 2.55
CNTFR-202ENST00000378980 SCAF1Q9H7N4 1312 aaKnown RBP30.98■■■□□ 2.55
CNTFR-202ENST00000378980 TROQ12816 1431 aaPredicted RBP30.97■■■□□ 2.55
CNTFR-202ENST00000378980 ADCY10Q96PN6 1610 aa30.96■■■□□ 2.55
CNTFR-202ENST00000378980 DNMT1P26358 1616 aaKnown RBP30.94■■■□□ 2.54
CNTFR-202ENST00000378980 RRP7BPQ9NSQ0 103 aa30.93■■■□□ 2.54
CNTFR-202ENST00000378980 CHIC2Q9UKJ5 165 aa30.93■■■□□ 2.54
CNTFR-202ENST00000378980 PRG4Q92954 1404 aaPredicted RBP30.93■■■□□ 2.54
CNTFR-202ENST00000378980 ABCA8O94911 1581 aa30.92■■■□□ 2.54
CNTFR-202ENST00000378980 ITSN2Q9NZM3 1697 aa30.91■■■□□ 2.54
CNTFR-202ENST00000378980 KDM6BO15054 1643 aa30.9■■■□□ 2.54
CNTFR-202ENST00000378980 DAPK1P53355 1430 aa30.9■■■□□ 2.54
CNTFR-202ENST00000378980 KIF14Q15058 1648 aa30.87■■■□□ 2.53
CNTFR-202ENST00000378980 ROCK1Q13464 1354 aa30.86■■■□□ 2.53
CNTFR-202ENST00000378980 CHD1O14646 1710 aa30.86■■■□□ 2.53
CNTFR-202ENST00000378980 ABCC5O15440 1437 aa30.85■■■□□ 2.53
CNTFR-202ENST00000378980 PPP1R15AO75807 674 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms