RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 MAGI1Q96QZ7 1491 aaPredicted RBP27.49■■□□□ 1.99
LYSMD4-203ENST00000378904 PPARGC1BQ86YN6 1023 aaKnown RBP27.43■■□□□ 1.98
LYSMD4-203ENST00000378904 GRIN2AQ12879 1464 aa27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 EFCAB5A4FU69 1503 aa27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 SYNJ2O15056 1496 aa27.39■■□□□ 1.98
LYSMD4-203ENST00000378904 IQGAP2Q13576 1575 aa27.34■■□□□ 1.97
LYSMD4-203ENST00000378904 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
LYSMD4-203ENST00000378904 SAMD9Q5K651 1589 aa27.32■■□□□ 1.96
LYSMD4-203ENST00000378904 P3H3Q8IVL6 736 aa27.3■■□□□ 1.96
LYSMD4-203ENST00000378904 FHOD3Q2V2M9 1422 aa27.28■■□□□ 1.96
LYSMD4-203ENST00000378904 APLP2Q06481 763 aa27.27■■□□□ 1.96
LYSMD4-203ENST00000378904 FBLN2P98095 1184 aa27.26■■□□□ 1.96
LYSMD4-203ENST00000378904 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.95
LYSMD4-203ENST00000378904 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
LYSMD4-203ENST00000378904 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
LYSMD4-203ENST00000378904 NUP160Q12769 1436 aa27.19■■□□□ 1.94
LYSMD4-203ENST00000378904 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
LYSMD4-203ENST00000378904 PCF11O94913 1555 aaKnown RBP27.17■■□□□ 1.94
LYSMD4-203ENST00000378904 CHD1O14646 1710 aa27.16■■□□□ 1.94
LYSMD4-203ENST00000378904 FMN1Q68DA7 1419 aa27.14■■□□□ 1.94
LYSMD4-203ENST00000378904 CASKIN1Q8WXD9 1431 aa27.09■■□□□ 1.93
LYSMD4-203ENST00000378904 FYCO1Q9BQS8 1478 aa27.09■■□□□ 1.93
LYSMD4-203ENST00000378904 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
LYSMD4-203ENST00000378904 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
LYSMD4-203ENST00000378904 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
LYSMD4-203ENST00000378904 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
LYSMD4-203ENST00000378904 KANK4Q5T7N3 995 aaPredicted RBP27.04■■□□□ 1.92
LYSMD4-203ENST00000378904 CFAP43Q8NDM7 1665 aa27.03■■□□□ 1.92
LYSMD4-203ENST00000378904 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
LYSMD4-203ENST00000378904 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
LYSMD4-203ENST00000378904 LRRIQ1Q96JM4 1722 aa26.95■■□□□ 1.91
LYSMD4-203ENST00000378904 HRCP23327 699 aa26.93■■□□□ 1.9
LYSMD4-203ENST00000378904 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
LYSMD4-203ENST00000378904 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
LYSMD4-203ENST00000378904 HECW1Q76N89 1606 aa26.89■■□□□ 1.9
LYSMD4-203ENST00000378904 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
LYSMD4-203ENST00000378904 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
LYSMD4-203ENST00000378904 CCDC18Q5T9S5 1454 aa26.81■■□□□ 1.88
LYSMD4-203ENST00000378904 RAPGEF6Q8TEU7 1601 aa26.81■■□□□ 1.88
LYSMD4-203ENST00000378904 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
LYSMD4-203ENST00000378904 EPRSP07814 1512 aaKnown RBP26.78■■□□□ 1.88
LYSMD4-203ENST00000378904 MTUS2Q5JR59 1369 aa26.73■■□□□ 1.87
LYSMD4-203ENST00000378904 NUP153P49790 1475 aaKnown RBP26.73■■□□□ 1.87
LYSMD4-203ENST00000378904 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
LYSMD4-203ENST00000378904 CDK13Q14004 1512 aaKnown RBP26.72■■□□□ 1.87
LYSMD4-203ENST00000378904 PLB1Q6P1J6 1458 aa26.72■■□□□ 1.87
LYSMD4-203ENST00000378904 EHBP1L1Q8N3D4 1523 aa26.7■■□□□ 1.86
LYSMD4-203ENST00000378904 MAGI3Q5TCQ9 1506 aa26.68■■□□□ 1.86
LYSMD4-203ENST00000378904 PHLDB1Q86UU1 1377 aa26.68■■□□□ 1.86
LYSMD4-203ENST00000378904 ABCA8O94911 1581 aa26.67■■□□□ 1.86
LYSMD4-203ENST00000378904 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
LYSMD4-203ENST00000378904 ARID3CA6NKF2 412 aa26.66■■□□□ 1.86
LYSMD4-203ENST00000378904 SUPT6HQ7KZ85 1726 aaKnown RBP26.65■■□□□ 1.86
LYSMD4-203ENST00000378904 PTPRGP23470 1445 aa26.64■■□□□ 1.86
LYSMD4-203ENST00000378904 CCNB3Q8WWL7 1395 aa26.64■■□□□ 1.85
LYSMD4-203ENST00000378904 HNRNPUL2Q1KMD3 747 aaKnown RBP26.6■■□□□ 1.85
LYSMD4-203ENST00000378904 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
LYSMD4-203ENST00000378904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
LYSMD4-203ENST00000378904 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
LYSMD4-203ENST00000378904 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
LYSMD4-203ENST00000378904 CDK11AQ9UQ88 783 aaPredicted RBP26.51■■□□□ 1.84
LYSMD4-203ENST00000378904 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
LYSMD4-203ENST00000378904 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
LYSMD4-203ENST00000378904 FGD6Q6ZV73 1430 aa26.48■■□□□ 1.83
LYSMD4-203ENST00000378904 ATP10BO94823 1461 aa26.48■■□□□ 1.83
LYSMD4-203ENST00000378904 TROQ12816 1431 aaPredicted RBP26.45■■□□□ 1.82
LYSMD4-203ENST00000378904 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
LYSMD4-203ENST00000378904 ABCC2Q92887 1545 aa26.43■■□□□ 1.82
LYSMD4-203ENST00000378904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
LYSMD4-203ENST00000378904 ADCY10Q96PN6 1610 aa26.41■■□□□ 1.82
LYSMD4-203ENST00000378904 ITGAEP38570 1179 aa26.4■■□□□ 1.82
LYSMD4-203ENST00000378904 PTPN23Q9H3S7 1636 aa26.38■■□□□ 1.81
LYSMD4-203ENST00000378904 KIF14Q15058 1648 aa26.37■■□□□ 1.81
LYSMD4-203ENST00000378904 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
LYSMD4-203ENST00000378904 UHRF1BP1LA0JNW5 1464 aa26.35■■□□□ 1.81
LYSMD4-203ENST00000378904 MIA2Q96PC5 1412 aa26.32■■□□□ 1.8
LYSMD4-203ENST00000378904 CCER1Q8TC90 406 aaPredicted RBP26.32■■□□□ 1.8
LYSMD4-203ENST00000378904 TCOF1Q13428 1488 aaKnown RBP26.31■■□□□ 1.8
LYSMD4-203ENST00000378904 ITSN2Q9NZM3 1697 aa26.28■■□□□ 1.8
LYSMD4-203ENST00000378904 ZCCHC11Q5TAX3 1644 aaKnown RBP26.28■■□□□ 1.8
LYSMD4-203ENST00000378904 ZEB1P37275 1124 aaPredicted RBP26.26■■□□□ 1.79
LYSMD4-203ENST00000378904 KDM5BQ9UGL1 1544 aa26.26■■□□□ 1.79
LYSMD4-203ENST00000378904 ABCC10Q5T3U5 1492 aa26.23■■□□□ 1.79
LYSMD4-203ENST00000378904 GPATCH8Q9UKJ3 1502 aaKnown RBP26.23■■□□□ 1.79
LYSMD4-203ENST00000378904 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
LYSMD4-203ENST00000378904 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
LYSMD4-203ENST00000378904 SETD5Q9C0A6 1442 aa26.16■■□□□ 1.78
LYSMD4-203ENST00000378904 CFDP1Q9UEE9 299 aaPredicted RBP26.15■■□□□ 1.78
LYSMD4-203ENST00000378904 RAB3GAP2Q9H2M9 1393 aa26.14■■□□□ 1.77
LYSMD4-203ENST00000378904 ZNF644Q9H582 1327 aaPredicted RBP26.12■■□□□ 1.77
LYSMD4-203ENST00000378904 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
LYSMD4-203ENST00000378904 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
LYSMD4-203ENST00000378904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.1■■□□□ 1.77
LYSMD4-203ENST00000378904 TTC37Q6PGP7 1564 aa26.1■■□□□ 1.77
LYSMD4-203ENST00000378904 PREX2Q70Z35 1606 aa26.09■■□□□ 1.77
LYSMD4-203ENST00000378904 CDC42BPBQ9Y5S2 1711 aa26.08■■□□□ 1.76
LYSMD4-203ENST00000378904 DAPK1P53355 1430 aa26.06■■□□□ 1.76
LYSMD4-203ENST00000378904 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms