RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
CCL19-202ENST00000378800 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
CCL19-202ENST00000378800 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
CCL19-202ENST00000378800 SHROOM2Q13796 1616 aa22.33■■□□□ 1.17
CCL19-202ENST00000378800 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
CCL19-202ENST00000378800 CSRNP3Q8WYN3 585 aa22.29■■□□□ 1.16
CCL19-202ENST00000378800 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
CCL19-202ENST00000378800 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
CCL19-202ENST00000378800 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
CCL19-202ENST00000378800 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.14
CCL19-202ENST00000378800 EEA1Q15075 1411 aa22.14■■□□□ 1.13
CCL19-202ENST00000378800 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
CCL19-202ENST00000378800 PTPRGP23470 1445 aa22.12■■□□□ 1.13
CCL19-202ENST00000378800 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
CCL19-202ENST00000378800 TNIKQ9UKE5 1360 aa22.09■■□□□ 1.13
CCL19-202ENST00000378800 DISP1Q96F81 1524 aa22.08■■□□□ 1.13
CCL19-202ENST00000378800 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
CCL19-202ENST00000378800 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCL19-202ENST00000378800 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
CCL19-202ENST00000378800 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
CCL19-202ENST00000378800 ADCY10Q96PN6 1610 aa21.95■■□□□ 1.1
CCL19-202ENST00000378800 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
CCL19-202ENST00000378800 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
CCL19-202ENST00000378800 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
CCL19-202ENST00000378800 GOLGA3Q08378 1498 aa21.91■■□□□ 1.1
CCL19-202ENST00000378800 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
CCL19-202ENST00000378800 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
CCL19-202ENST00000378800 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
CCL19-202ENST00000378800 FAM69CQ0P6D2 419 aa21.86■■□□□ 1.09
CCL19-202ENST00000378800 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
CCL19-202ENST00000378800 KIF21BO75037 1637 aa21.85■■□□□ 1.09
CCL19-202ENST00000378800 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
CCL19-202ENST00000378800 MAPKBP1O60336 1514 aa21.81■■□□□ 1.08
CCL19-202ENST00000378800 ABCC10Q5T3U5 1492 aa21.8■■□□□ 1.08
CCL19-202ENST00000378800 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
CCL19-202ENST00000378800 ASXL2Q76L83 1435 aa21.77■■□□□ 1.08
CCL19-202ENST00000378800 ABCA8O94911 1581 aa21.74■■□□□ 1.07
CCL19-202ENST00000378800 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
CCL19-202ENST00000378800 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
CCL19-202ENST00000378800 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
CCL19-202ENST00000378800 DIP2BQ9P265 1576 aa21.67■■□□□ 1.06
CCL19-202ENST00000378800 ATP10BO94823 1461 aa21.65■■□□□ 1.06
CCL19-202ENST00000378800 KIF13AQ9H1H9 1805 aa21.64■■□□□ 1.06
CCL19-202ENST00000378800 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
CCL19-202ENST00000378800 ZCCHC11Q5TAX3 1644 aaKnown RBP21.64■■□□□ 1.05
CCL19-202ENST00000378800 EFCAB5A4FU69 1503 aa21.61■■□□□ 1.05
CCL19-202ENST00000378800 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
CCL19-202ENST00000378800 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
CCL19-202ENST00000378800 WDR7Q9Y4E6 1490 aa21.59■■□□□ 1.05
CCL19-202ENST00000378800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
CCL19-202ENST00000378800 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
CCL19-202ENST00000378800 NUP153P49790 1475 aaKnown RBP21.57■■□□□ 1.04
CCL19-202ENST00000378800 GLI2P10070 1586 aa21.56■■□□□ 1.04
CCL19-202ENST00000378800 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
CCL19-202ENST00000378800 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
CCL19-202ENST00000378800 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
CCL19-202ENST00000378800 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
CCL19-202ENST00000378800 PLEKHD1A6NEE1 506 aa21.48■■□□□ 1.03
CCL19-202ENST00000378800 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
CCL19-202ENST00000378800 CLIP1P30622 1438 aa21.45■■□□□ 1.02
CCL19-202ENST00000378800 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
CCL19-202ENST00000378800 MAP3K4Q9Y6R4 1608 aa21.41■■□□□ 1.02
CCL19-202ENST00000378800 COL17A1Q9UMD9 1497 aaPredicted RBP21.4■■□□□ 1.02
CCL19-202ENST00000378800 PPRC1Q5VV67 1664 aaKnown RBP21.4■■□□□ 1.02
CCL19-202ENST00000378800 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.02
CCL19-202ENST00000378800 MAGI3Q5TCQ9 1506 aa21.37■■□□□ 1.01
CCL19-202ENST00000378800 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
CCL19-202ENST00000378800 KDM6BO15054 1643 aa21.34■■□□□ 1.01
CCL19-202ENST00000378800 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
CCL19-202ENST00000378800 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1.01
CCL19-202ENST00000378800 CEP162Q5TB80 1403 aa21.32■■□□□ 1
CCL19-202ENST00000378800 HECW1Q76N89 1606 aa21.29■■□□□ 1
CCL19-202ENST00000378800 CFAP43Q8NDM7 1665 aa21.29■■□□□ 1
CCL19-202ENST00000378800 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
CCL19-202ENST00000378800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCL19-202ENST00000378800 PCF11O94913 1555 aaKnown RBP21.24■□□□□ 0.99
CCL19-202ENST00000378800 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
CCL19-202ENST00000378800 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
CCL19-202ENST00000378800 RAPGEF3O95398 923 aa21.22■□□□□ 0.99
CCL19-202ENST00000378800 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
CCL19-202ENST00000378800 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
CCL19-202ENST00000378800 CCDC18Q5T9S5 1454 aa21.19■□□□□ 0.98
CCL19-202ENST00000378800 NEO1Q92859 1461 aa21.19■□□□□ 0.98
CCL19-202ENST00000378800 PLCH2O75038 1416 aa21.18■□□□□ 0.98
CCL19-202ENST00000378800 LRRIQ1Q96JM4 1722 aa21.16■□□□□ 0.98
CCL19-202ENST00000378800 TTC37Q6PGP7 1564 aa21.16■□□□□ 0.98
CCL19-202ENST00000378800 AKNAQ7Z591 1439 aa21.15■□□□□ 0.98
CCL19-202ENST00000378800 FANCAO15360 1455 aa21.14■□□□□ 0.98
CCL19-202ENST00000378800 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.97
CCL19-202ENST00000378800 KDM4FA0A1W2PPD8 638 aa21.13■□□□□ 0.97
CCL19-202ENST00000378800 KIF14Q15058 1648 aa21.11■□□□□ 0.97
CCL19-202ENST00000378800 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
CCL19-202ENST00000378800 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
CCL19-202ENST00000378800 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
CCL19-202ENST00000378800 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
CCL19-202ENST00000378800 VPS8Q8N3P4 1428 aa21.05■□□□□ 0.96
CCL19-202ENST00000378800 ADGRL1O94910 1474 aa21.01■□□□□ 0.95
CCL19-202ENST00000378800 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
CCL19-202ENST00000378800 FRMPD1Q5SYB0 1578 aa21■□□□□ 0.95
CCL19-202ENST00000378800 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms