RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
OPTN-204ENST00000378752 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
OPTN-204ENST00000378752 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
OPTN-204ENST00000378752 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
OPTN-204ENST00000378752 NBR1Q14596 966 aa12.81□□□□□ -0.36
OPTN-204ENST00000378752 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
OPTN-204ENST00000378752 ZNF326Q5BKZ1 582 aaKnown RBP12.79□□□□□ -0.36
OPTN-204ENST00000378752 RRP7BPQ9NSQ0 103 aa12.77□□□□□ -0.36
OPTN-204ENST00000378752 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.37
OPTN-204ENST00000378752 KIF27Q86VH2 1401 aa12.75□□□□□ -0.37
OPTN-204ENST00000378752 SETD5Q9C0A6 1442 aa12.75□□□□□ -0.37
OPTN-204ENST00000378752 PPP1R15AO75807 674 aaPredicted RBP12.72□□□□□ -0.37
OPTN-204ENST00000378752 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
OPTN-204ENST00000378752 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
OPTN-204ENST00000378752 FOXD1Q16676 465 aa12.71□□□□□ -0.37
OPTN-204ENST00000378752 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
OPTN-204ENST00000378752 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
OPTN-204ENST00000378752 MRS2Q9HD23 443 aa12.71□□□□□ -0.37
OPTN-204ENST00000378752 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
OPTN-204ENST00000378752 CUX2O14529 1486 aa12.69□□□□□ -0.38
OPTN-204ENST00000378752 MSH5O43196 834 aa12.68□□□□□ -0.38
OPTN-204ENST00000378752 PHLDB1Q86UU1 1377 aa12.68□□□□□ -0.38
OPTN-204ENST00000378752 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
OPTN-204ENST00000378752 MTUS2Q5JR59 1369 aa12.65□□□□□ -0.38
OPTN-204ENST00000378752 ARHGAP35Q9NRY4 1499 aa12.65□□□□□ -0.38
OPTN-204ENST00000378752 CC2D2AQ9P2K1 1620 aa12.65□□□□□ -0.38
OPTN-204ENST00000378752 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
OPTN-204ENST00000378752 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
OPTN-204ENST00000378752 HSPA5P11021 654 aaKnown RBP12.64□□□□□ -0.39
OPTN-204ENST00000378752 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
OPTN-204ENST00000378752 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
OPTN-204ENST00000378752 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
OPTN-204ENST00000378752 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
OPTN-204ENST00000378752 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
OPTN-204ENST00000378752 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
OPTN-204ENST00000378752 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.39
OPTN-204ENST00000378752 MAPKBP1O60336 1514 aa12.57□□□□□ -0.4
OPTN-204ENST00000378752 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
OPTN-204ENST00000378752 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
OPTN-204ENST00000378752 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
OPTN-204ENST00000378752 ZNF777Q9ULD5 760 aaPredicted RBP12.55□□□□□ -0.4
OPTN-204ENST00000378752 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
OPTN-204ENST00000378752 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
OPTN-204ENST00000378752 IGF1RP08069 1367 aa12.54□□□□□ -0.4
OPTN-204ENST00000378752 CUX1P39880 1505 aa12.53□□□□□ -0.4
OPTN-204ENST00000378752 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
OPTN-204ENST00000378752 LRRC9Q6ZRR7 1453 aa12.52□□□□□ -0.4
OPTN-204ENST00000378752 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
OPTN-204ENST00000378752 L3MBTL2Q969R5 705 aa12.51□□□□□ -0.41
OPTN-204ENST00000378752 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
OPTN-204ENST00000378752 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
OPTN-204ENST00000378752 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
OPTN-204ENST00000378752 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
OPTN-204ENST00000378752 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
OPTN-204ENST00000378752 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
OPTN-204ENST00000378752 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
OPTN-204ENST00000378752 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
OPTN-204ENST00000378752 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
OPTN-204ENST00000378752 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
OPTN-204ENST00000378752 CCDC18Q5T9S5 1454 aa12.48□□□□□ -0.41
OPTN-204ENST00000378752 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
OPTN-204ENST00000378752 C11orf95C9JLR9 678 aaPredicted RBP12.46□□□□□ -0.41
OPTN-204ENST00000378752 TIAM1Q13009 1591 aa12.46□□□□□ -0.41
OPTN-204ENST00000378752 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
OPTN-204ENST00000378752 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
OPTN-204ENST00000378752 MPHOSPH9Q99550 1183 aa12.43□□□□□ -0.42
OPTN-204ENST00000378752 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
OPTN-204ENST00000378752 RAD54L2Q9Y4B4 1467 aa12.42□□□□□ -0.42
OPTN-204ENST00000378752 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
OPTN-204ENST00000378752 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.43
OPTN-204ENST00000378752 FBLN2P98095 1184 aa12.39□□□□□ -0.43
OPTN-204ENST00000378752 AKNAQ7Z591 1439 aa12.39□□□□□ -0.43
OPTN-204ENST00000378752 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
OPTN-204ENST00000378752 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
OPTN-204ENST00000378752 PCF11O94913 1555 aaKnown RBP12.37□□□□□ -0.43
OPTN-204ENST00000378752 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
OPTN-204ENST00000378752 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
OPTN-204ENST00000378752 FMN1Q68DA7 1419 aa12.36□□□□□ -0.43
OPTN-204ENST00000378752 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.433e-7■■□□□ 11.5
OPTN-204ENST00000378752 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
OPTN-204ENST00000378752 UACAQ9BZF9 1416 aa12.35□□□□□ -0.43
OPTN-204ENST00000378752 ZNF644Q9H582 1327 aaPredicted RBP12.35□□□□□ -0.43
OPTN-204ENST00000378752 SKAP1Q86WV1 359 aa12.34□□□□□ -0.43
OPTN-204ENST00000378752 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
OPTN-204ENST00000378752 NEFMP07197 916 aa12.34□□□□□ -0.43
OPTN-204ENST00000378752 RGL3Q3MIN7 710 aa12.34□□□□□ -0.43
OPTN-204ENST00000378752 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
OPTN-204ENST00000378752 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
OPTN-204ENST00000378752 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
OPTN-204ENST00000378752 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
OPTN-204ENST00000378752 PLIN1O60240 522 aa12.32□□□□□ -0.44
OPTN-204ENST00000378752 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
OPTN-204ENST00000378752 CFTRP13569 1480 aa12.32□□□□□ -0.44
OPTN-204ENST00000378752 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
OPTN-204ENST00000378752 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
OPTN-204ENST00000378752 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
OPTN-204ENST00000378752 CNTLNQ9NXG0 1405 aa12.3□□□□□ -0.44
OPTN-204ENST00000378752 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
OPTN-204ENST00000378752 IPO9Q96P70 1041 aaKnown RBP12.3□□□□□ -0.44
OPTN-204ENST00000378752 ARXQ96QS3 562 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms