RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
DMD-209ENST00000378702 KIF21BO75037 1637 aa14.2□□□□□ -0.14
DMD-209ENST00000378702 WASHC2CQ9Y4E1 1318 aa14.19□□□□□ -0.14
DMD-209ENST00000378702 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
DMD-209ENST00000378702 MAPKBP1O60336 1514 aa14.17□□□□□ -0.14
DMD-209ENST00000378702 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
DMD-209ENST00000378702 ANP32AP39687 249 aaKnown RBP14.16□□□□□ -0.14
DMD-209ENST00000378702 ZBTB47Q9UFB7 747 aaPredicted RBP14.15□□□□□ -0.14
DMD-209ENST00000378702 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
DMD-209ENST00000378702 USP35Q9P2H5 1018 aa14.14□□□□□ -0.15
DMD-209ENST00000378702 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
DMD-209ENST00000378702 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
DMD-209ENST00000378702 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
DMD-209ENST00000378702 RSPH6AQ9H0K4 717 aa14.07□□□□□ -0.16
DMD-209ENST00000378702 BRPF3Q9ULD4 1205 aa14.05□□□□□ -0.16
DMD-209ENST00000378702 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
DMD-209ENST00000378702 NEFMP07197 916 aa14.04□□□□□ -0.16
DMD-209ENST00000378702 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
DMD-209ENST00000378702 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.16
DMD-209ENST00000378702 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.17
DMD-209ENST00000378702 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
DMD-209ENST00000378702 GLIPR1L2Q4G1C9 344 aa14□□□□□ -0.17
DMD-209ENST00000378702 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
DMD-209ENST00000378702 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
DMD-209ENST00000378702 HIRIP3Q9BW71 556 aaPredicted RBP13.96□□□□□ -0.17
DMD-209ENST00000378702 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
DMD-209ENST00000378702 GSE1Q14687 1217 aa13.95□□□□□ -0.18
DMD-209ENST00000378702 KANK4Q5T7N3 995 aaPredicted RBP13.95□□□□□ -0.18
DMD-209ENST00000378702 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
DMD-209ENST00000378702 SLC24A1O60721 1099 aa13.94□□□□□ -0.18
DMD-209ENST00000378702 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
DMD-209ENST00000378702 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
DMD-209ENST00000378702 ZMYND15Q9H091 742 aa13.94□□□□□ -0.18
DMD-209ENST00000378702 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
DMD-209ENST00000378702 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
DMD-209ENST00000378702 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
DMD-209ENST00000378702 ARAP1Q96P48 1450 aa13.92□□□□□ -0.18
DMD-209ENST00000378702 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
DMD-209ENST00000378702 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
DMD-209ENST00000378702 SETD5Q9C0A6 1442 aa13.91□□□□□ -0.18
DMD-209ENST00000378702 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
DMD-209ENST00000378702 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
DMD-209ENST00000378702 RNF123Q5XPI4 1314 aa13.86□□□□□ -0.19
DMD-209ENST00000378702 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
DMD-209ENST00000378702 SMG6Q86US8 1419 aaKnown RBP13.83□□□□□ -0.2
DMD-209ENST00000378702 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
DMD-209ENST00000378702 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
DMD-209ENST00000378702 AKNAQ7Z591 1439 aa13.8□□□□□ -0.2
DMD-209ENST00000378702 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
DMD-209ENST00000378702 NFKBIBQ15653 356 aa13.8□□□□□ -0.2
DMD-209ENST00000378702 CCDC184Q52MB2 194 aa13.79□□□□□ -0.2
DMD-209ENST00000378702 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
DMD-209ENST00000378702 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
DMD-209ENST00000378702 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
DMD-209ENST00000378702 PDE4AP27815 886 aa13.77□□□□□ -0.21
DMD-209ENST00000378702 BACH2Q9BYV9 841 aa13.77□□□□□ -0.21
DMD-209ENST00000378702 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
DMD-209ENST00000378702 DDRGK1Q96HY6 314 aa13.76□□□□□ -0.21
DMD-209ENST00000378702 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
DMD-209ENST00000378702 RRP9O43818 475 aaKnown RBP13.75□□□□□ -0.21
DMD-209ENST00000378702 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
DMD-209ENST00000378702 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
DMD-209ENST00000378702 MS4A1P11836 297 aa13.74□□□□□ -0.21
DMD-209ENST00000378702 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
DMD-209ENST00000378702 SMARCA4P51532 1647 aa13.73□□□□□ -0.21
DMD-209ENST00000378702 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
DMD-209ENST00000378702 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
DMD-209ENST00000378702 MRS2Q9HD23 443 aa13.72□□□□□ -0.21
DMD-209ENST00000378702 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
DMD-209ENST00000378702 KDM5BQ9UGL1 1544 aa13.7□□□□□ -0.22
DMD-209ENST00000378702 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
DMD-209ENST00000378702 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
DMD-209ENST00000378702 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
DMD-209ENST00000378702 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
DMD-209ENST00000378702 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
DMD-209ENST00000378702 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
DMD-209ENST00000378702 PHLDB1Q86UU1 1377 aa13.62□□□□□ -0.23
DMD-209ENST00000378702 NAP1L5Q96NT1 182 aaPredicted RBP13.61□□□□□ -0.23
DMD-209ENST00000378702 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
DMD-209ENST00000378702 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
DMD-209ENST00000378702 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
DMD-209ENST00000378702 ABCA5Q8WWZ7 1642 aa13.59□□□□□ -0.23
DMD-209ENST00000378702 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
DMD-209ENST00000378702 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
DMD-209ENST00000378702 CLCN1P35523 988 aa13.58□□□□□ -0.24
DMD-209ENST00000378702 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
DMD-209ENST00000378702 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
DMD-209ENST00000378702 FAM50AQ14320 339 aaKnown RBP13.57□□□□□ -0.24
DMD-209ENST00000378702 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
DMD-209ENST00000378702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
DMD-209ENST00000378702 SLC4A3P48751 1232 aa13.56□□□□□ -0.24
DMD-209ENST00000378702 RRP1P56182 461 aaKnown RBP13.56□□□□□ -0.24
DMD-209ENST00000378702 L1TD1Q5T7N2 865 aaKnown RBP13.56□□□□□ -0.24
DMD-209ENST00000378702 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
DMD-209ENST00000378702 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
DMD-209ENST00000378702 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
DMD-209ENST00000378702 AAMPQ13685 434 aa13.55□□□□□ -0.24
DMD-209ENST00000378702 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
DMD-209ENST00000378702 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
DMD-209ENST00000378702 CFAP43Q8NDM7 1665 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms