RNA–Protein interactions for RNA: ENST00000378680.6

DMD-208, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-208ENST00000378680 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
DMD-208ENST00000378680 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
DMD-208ENST00000378680 EFCAB5A4FU69 1503 aa29.46■■■□□ 2.31
DMD-208ENST00000378680 PCGF6Q9BYE7 350 aa29.45■■■□□ 2.31
DMD-208ENST00000378680 SYNJ2O15056 1496 aa29.43■■■□□ 2.3
DMD-208ENST00000378680 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
DMD-208ENST00000378680 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
DMD-208ENST00000378680 APLP2Q06481 763 aa29.41■■■□□ 2.3
DMD-208ENST00000378680 CHMP7Q8WUX9 453 aaPredicted RBP29.4■■■□□ 2.3
DMD-208ENST00000378680 IQGAP2Q13576 1575 aa29.36■■■□□ 2.29
DMD-208ENST00000378680 P3H3Q8IVL6 736 aa29.32■■■□□ 2.28
DMD-208ENST00000378680 FBLN2P98095 1184 aa29.31■■■□□ 2.28
DMD-208ENST00000378680 SAMD9Q5K651 1589 aa29.31■■■□□ 2.28
DMD-208ENST00000378680 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
DMD-208ENST00000378680 FHOD3Q2V2M9 1422 aa29.29■■■□□ 2.28
DMD-208ENST00000378680 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
DMD-208ENST00000378680 TTBK1Q5TCY1 1321 aaPredicted RBP29.22■■■□□ 2.27
DMD-208ENST00000378680 UGGT2Q9NYU1 1516 aa29.21■■■□□ 2.27
DMD-208ENST00000378680 FMN1Q68DA7 1419 aa29.2■■■□□ 2.27
DMD-208ENST00000378680 NUP160Q12769 1436 aa29.2■■■□□ 2.26
DMD-208ENST00000378680 PCF11O94913 1555 aaKnown RBP29.15■■■□□ 2.26
DMD-208ENST00000378680 FYCO1Q9BQS8 1478 aa29.12■■■□□ 2.25
DMD-208ENST00000378680 CHD1O14646 1710 aa29.12■■■□□ 2.25
DMD-208ENST00000378680 CASKIN1Q8WXD9 1431 aa29.11■■■□□ 2.25
DMD-208ENST00000378680 MAP3K1Q13233 1512 aa29.11■■■□□ 2.25
DMD-208ENST00000378680 ATP1B4Q9UN42 357 aaPredicted RBP29.06■■■□□ 2.24
DMD-208ENST00000378680 TIAM1Q13009 1591 aa29.06■■■□□ 2.24
DMD-208ENST00000378680 KIAA0556O60303 1618 aa29.06■■■□□ 2.24
DMD-208ENST00000378680 DISP1Q96F81 1524 aa29.03■■■□□ 2.24
DMD-208ENST00000378680 KANK4Q5T7N3 995 aaPredicted RBP29.02■■■□□ 2.24
DMD-208ENST00000378680 JPH4Q96JJ6 628 aa29.01■■■□□ 2.23
DMD-208ENST00000378680 CFAP43Q8NDM7 1665 aa29.01■■■□□ 2.23
DMD-208ENST00000378680 CARMIL2Q6F5E8 1435 aa28.97■■■□□ 2.23
DMD-208ENST00000378680 LRRC9Q6ZRR7 1453 aa28.93■■■□□ 2.22
DMD-208ENST00000378680 HECW1Q76N89 1606 aa28.9■■■□□ 2.22
DMD-208ENST00000378680 LRRIQ1Q96JM4 1722 aa28.85■■■□□ 2.21
DMD-208ENST00000378680 CCDC18Q5T9S5 1454 aa28.85■■■□□ 2.21
DMD-208ENST00000378680 PRG4Q92954 1404 aaPredicted RBP28.81■■■□□ 2.2
DMD-208ENST00000378680 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
DMD-208ENST00000378680 RAPGEF6Q8TEU7 1601 aa28.79■■■□□ 2.2
DMD-208ENST00000378680 EPRSP07814 1512 aaKnown RBP28.76■■■□□ 2.19
DMD-208ENST00000378680 MTUS2Q5JR59 1369 aa28.76■■■□□ 2.19
DMD-208ENST00000378680 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
DMD-208ENST00000378680 RRBP1Q9P2E9 1410 aaKnown RBP28.71■■■□□ 2.19
DMD-208ENST00000378680 EHBP1L1Q8N3D4 1523 aa28.7■■■□□ 2.18
DMD-208ENST00000378680 NUP153P49790 1475 aaKnown RBP28.68■■■□□ 2.18
DMD-208ENST00000378680 PLB1Q6P1J6 1458 aa28.67■■■□□ 2.18
DMD-208ENST00000378680 CDK13Q14004 1512 aaKnown RBP28.67■■■□□ 2.18
DMD-208ENST00000378680 PTPRGP23470 1445 aa28.66■■■□□ 2.18
DMD-208ENST00000378680 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
DMD-208ENST00000378680 PHLDB1Q86UU1 1377 aa28.64■■■□□ 2.18
DMD-208ENST00000378680 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
DMD-208ENST00000378680 ABCA8O94911 1581 aa28.62■■■□□ 2.17
DMD-208ENST00000378680 ARID3CA6NKF2 412 aa28.61■■■□□ 2.17
DMD-208ENST00000378680 MAGI3Q5TCQ9 1506 aa28.6■■■□□ 2.17
DMD-208ENST00000378680 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
DMD-208ENST00000378680 HRCP23327 699 aa28.58■■■□□ 2.17
DMD-208ENST00000378680 CDK11AQ9UQ88 783 aaPredicted RBP28.58■■■□□ 2.17
DMD-208ENST00000378680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.57■■■□□ 2.16
DMD-208ENST00000378680 NCOA2Q15596 1464 aa28.56■■■□□ 2.16
DMD-208ENST00000378680 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
DMD-208ENST00000378680 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
DMD-208ENST00000378680 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
DMD-208ENST00000378680 UACAQ9BZF9 1416 aa28.49■■■□□ 2.15
DMD-208ENST00000378680 MYOM3Q5VTT5 1437 aa28.47■■■□□ 2.15
DMD-208ENST00000378680 FGD6Q6ZV73 1430 aa28.46■■■□□ 2.15
DMD-208ENST00000378680 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
DMD-208ENST00000378680 ATP10BO94823 1461 aa28.44■■■□□ 2.14
DMD-208ENST00000378680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.44■■■□□ 2.14
DMD-208ENST00000378680 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
DMD-208ENST00000378680 ABCC2Q92887 1545 aa28.39■■■□□ 2.14
DMD-208ENST00000378680 PLEKHD1A6NEE1 506 aa28.38■■■□□ 2.13
DMD-208ENST00000378680 ITGAEP38570 1179 aa28.38■■■□□ 2.13
DMD-208ENST00000378680 ADCY10Q96PN6 1610 aa28.35■■■□□ 2.13
DMD-208ENST00000378680 ZEB1P37275 1124 aaPredicted RBP28.35■■■□□ 2.13
DMD-208ENST00000378680 CCER1Q8TC90 406 aaPredicted RBP28.34■■■□□ 2.13
DMD-208ENST00000378680 PTPN23Q9H3S7 1636 aa28.33■■■□□ 2.13
DMD-208ENST00000378680 MIA2Q96PC5 1412 aa28.32■■■□□ 2.12
DMD-208ENST00000378680 UHRF1BP1LA0JNW5 1464 aa28.32■■■□□ 2.12
DMD-208ENST00000378680 KIF14Q15058 1648 aa28.28■■■□□ 2.12
DMD-208ENST00000378680 TCOF1Q13428 1488 aaKnown RBP28.27■■■□□ 2.12
DMD-208ENST00000378680 ITSN2Q9NZM3 1697 aa28.24■■■□□ 2.11
DMD-208ENST00000378680 KDM5BQ9UGL1 1544 aa28.2■■■□□ 2.1
DMD-208ENST00000378680 ZCCHC11Q5TAX3 1644 aaKnown RBP28.2■■■□□ 2.1
DMD-208ENST00000378680 GPATCH8Q9UKJ3 1502 aaKnown RBP28.16■■■□□ 2.1
DMD-208ENST00000378680 ABCC10Q5T3U5 1492 aa28.16■■■□□ 2.1
DMD-208ENST00000378680 SETD5Q9C0A6 1442 aa28.15■■■□□ 2.1
DMD-208ENST00000378680 CFDP1Q9UEE9 299 aaPredicted RBP28.14■■■□□ 2.1
DMD-208ENST00000378680 CDC42BPAQ5VT25 1732 aa28.11■■■□□ 2.09
DMD-208ENST00000378680 PTPRKQ15262 1439 aa28.08■■■□□ 2.09
DMD-208ENST00000378680 RAB3GAP2Q9H2M9 1393 aa28.08■■■□□ 2.09
DMD-208ENST00000378680 CAMSAP2Q08AD1 1489 aa28.06■■■□□ 2.08
DMD-208ENST00000378680 ZNF644Q9H582 1327 aaPredicted RBP28.03■■■□□ 2.08
DMD-208ENST00000378680 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
DMD-208ENST00000378680 ZNF777Q9ULD5 760 aaPredicted RBP28.02■■■□□ 2.08
DMD-208ENST00000378680 HFM1A2PYH4 1435 aa28.01■■■□□ 2.07
DMD-208ENST00000378680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.01■■■□□ 2.07
DMD-208ENST00000378680 DAPK1P53355 1430 aa28.01■■■□□ 2.07
DMD-208ENST00000378680 KCNH8Q96L42 1107 aa28■■■□□ 2.07
DMD-208ENST00000378680 PREX2Q70Z35 1606 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms