RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 RAPGEF2Q9Y4G8 1499 aa38.81■■■■□ 3.8
RPP38-201ENST00000378197 ERCC6L2Q5T890 1561 aa38.8■■■■□ 3.8
RPP38-201ENST00000378197 KIAA0586Q9BVV6 1533 aa38.79■■■■□ 3.8
RPP38-201ENST00000378197 JPH4Q96JJ6 628 aa38.77■■■■□ 3.8
RPP38-201ENST00000378197 PRG4Q92954 1404 aaPredicted RBP38.71■■■■□ 3.79
RPP38-201ENST00000378197 PRXQ9BXM0 1461 aa38.67■■■■□ 3.78
RPP38-201ENST00000378197 EEA1Q15075 1411 aa38.65■■■■□ 3.78
RPP38-201ENST00000378197 CSRNP3Q8WYN3 585 aa38.62■■■■□ 3.77
RPP38-201ENST00000378197 IQGAP2Q13576 1575 aa38.58■■■■□ 3.77
RPP38-201ENST00000378197 FAM9AQ8IZU1 332 aaPredicted RBP38.52■■■■□ 3.76
RPP38-201ENST00000378197 CTTNBP2Q8WZ74 1663 aa38.45■■■■□ 3.75
RPP38-201ENST00000378197 CARMIL2Q6F5E8 1435 aa38.38■■■■□ 3.73
RPP38-201ENST00000378197 UGGT2Q9NYU1 1516 aa38.37■■■■□ 3.73
RPP38-201ENST00000378197 DISP1Q96F81 1524 aa38.32■■■■□ 3.72
RPP38-201ENST00000378197 KIF21BO75037 1637 aa38.27■■■■□ 3.72
RPP38-201ENST00000378197 TNIKQ9UKE5 1360 aa38.27■■■■□ 3.72
RPP38-201ENST00000378197 PTPRGP23470 1445 aa38.24■■■■□ 3.71
RPP38-201ENST00000378197 KIAA0556O60303 1618 aa38.22■■■■□ 3.71
RPP38-201ENST00000378197 TTBK1Q5TCY1 1321 aaPredicted RBP38.2■■■■□ 3.71
RPP38-201ENST00000378197 GOLGA3Q08378 1498 aa38.14■■■■□ 3.7
RPP38-201ENST00000378197 ADCY10Q96PN6 1610 aa38.14■■■■□ 3.7
RPP38-201ENST00000378197 TRHP20396 242 aaPredicted RBP38.1■■■■□ 3.69
RPP38-201ENST00000378197 EHMT2Q96KQ7 1210 aa38.04■■■■□ 3.68
RPP38-201ENST00000378197 NPM1P06748 294 aaKnown RBP eCLIP38.01■■■■□ 3.67
RPP38-201ENST00000378197 UACAQ9BZF9 1416 aa37.99■■■■□ 3.67
RPP38-201ENST00000378197 SAMD9Q5K651 1589 aa37.95■■■■□ 3.67
RPP38-201ENST00000378197 UBTFP17480 764 aaKnown RBP37.95■■■■□ 3.67
RPP38-201ENST00000378197 UHRF1BP1LA0JNW5 1464 aa37.94■■■■□ 3.66
RPP38-201ENST00000378197 RANGAP1P46060 587 aaPredicted RBP37.92■■■■□ 3.66
RPP38-201ENST00000378197 P3H3Q8IVL6 736 aa37.92■■■■□ 3.66
RPP38-201ENST00000378197 ABCC2Q92887 1545 aa37.92■■■■□ 3.66
RPP38-201ENST00000378197 MAPKBP1O60336 1514 aa37.88■■■■□ 3.66
RPP38-201ENST00000378197 PLB1Q6P1J6 1458 aa37.85■■■■□ 3.65
RPP38-201ENST00000378197 ABCA8O94911 1581 aa37.8■■■■□ 3.64
RPP38-201ENST00000378197 EFCAB5A4FU69 1503 aa37.78■■■■□ 3.64
RPP38-201ENST00000378197 KDM5BQ9UGL1 1544 aa37.77■■■■□ 3.64
RPP38-201ENST00000378197 FHOD3Q2V2M9 1422 aa37.74■■■■□ 3.63
RPP38-201ENST00000378197 KIF13AQ9H1H9 1805 aa37.73■■■■□ 3.63
RPP38-201ENST00000378197 ABCC10Q5T3U5 1492 aa37.72■■■■□ 3.63
RPP38-201ENST00000378197 ZCCHC11Q5TAX3 1644 aaKnown RBP37.71■■■■□ 3.63
RPP38-201ENST00000378197 DIP2BQ9P265 1576 aa37.68■■■■□ 3.62
RPP38-201ENST00000378197 ASXL2Q76L83 1435 aa37.67■■■■□ 3.62
RPP38-201ENST00000378197 FAM69CQ0P6D2 419 aa37.64■■■■□ 3.62
RPP38-201ENST00000378197 RAPGEF6Q8TEU7 1601 aa37.6■■■■□ 3.61
RPP38-201ENST00000378197 ARHGAP35Q9NRY4 1499 aa37.59■■■■□ 3.61
RPP38-201ENST00000378197 ARID3CA6NKF2 412 aa37.51■■■■□ 3.59
RPP38-201ENST00000378197 ATP10BO94823 1461 aa37.49■■■■□ 3.59
RPP38-201ENST00000378197 WDR7Q9Y4E6 1490 aa37.47■■■■□ 3.59
RPP38-201ENST00000378197 NUP153P49790 1475 aaKnown RBP37.46■■■■□ 3.59
RPP38-201ENST00000378197 EPRSP07814 1512 aaKnown RBP37.46■■■■□ 3.59
RPP38-201ENST00000378197 GLI2P10070 1586 aa37.44■■■■□ 3.58
RPP38-201ENST00000378197 FMN1Q68DA7 1419 aa37.42■■■■□ 3.58
RPP38-201ENST00000378197 TSPOAP1O95153 1857 aa37.36■■■■□ 3.57
RPP38-201ENST00000378197 CLIP1P30622 1438 aa37.36■■■■□ 3.57
RPP38-201ENST00000378197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.34■■■■□ 3.57
RPP38-201ENST00000378197 HNRNPUL2Q1KMD3 747 aaKnown RBP37.34■■■■□ 3.57
RPP38-201ENST00000378197 KCNH8Q96L42 1107 aa37.31■■■■□ 3.56
RPP38-201ENST00000378197 MAP3K4Q9Y6R4 1608 aa37.28■■■■□ 3.56
RPP38-201ENST00000378197 LOC105371045A0A1W2PR82 267 aa37.26■■■■□ 3.56
RPP38-201ENST00000378197 HECW1Q76N89 1606 aa37.26■■■■□ 3.56
RPP38-201ENST00000378197 ATP1B4Q9UN42 357 aaPredicted RBP37.24■■■■□ 3.55
RPP38-201ENST00000378197 PPRC1Q5VV67 1664 aaKnown RBP37.24■■■■□ 3.55
RPP38-201ENST00000378197 CDK13Q14004 1512 aaKnown RBP37.21■■■■□ 3.55
RPP38-201ENST00000378197 CEP162Q5TB80 1403 aa37.19■■■■□ 3.54
RPP38-201ENST00000378197 CFAP43Q8NDM7 1665 aa37.17■■■■□ 3.54
RPP38-201ENST00000378197 PCF11O94913 1555 aaKnown RBP37.16■■■■□ 3.54
RPP38-201ENST00000378197 PLEKHD1A6NEE1 506 aa37.15■■■■□ 3.54
RPP38-201ENST00000378197 CD109Q6YHK3 1445 aa37.13■■■■□ 3.53
RPP38-201ENST00000378197 CASKIN1Q8WXD9 1431 aa37.13■■■■□ 3.53
RPP38-201ENST00000378197 TEX14Q8IWB6 1497 aa37.1■■■■□ 3.53
RPP38-201ENST00000378197 ABCA9Q8IUA7 1624 aa37.09■■■■□ 3.53
RPP38-201ENST00000378197 LRRIQ1Q96JM4 1722 aa37.08■■■■□ 3.53
RPP38-201ENST00000378197 KDM6BO15054 1643 aa37.08■■■■□ 3.53
RPP38-201ENST00000378197 MAGI3Q5TCQ9 1506 aa37.05■■■■□ 3.52
RPP38-201ENST00000378197 FYCO1Q9BQS8 1478 aa37.04■■■■□ 3.52
RPP38-201ENST00000378197 CDK11AQ9UQ88 783 aaPredicted RBP36.98■■■■□ 3.51
RPP38-201ENST00000378197 CCDC18Q5T9S5 1454 aa36.98■■■■□ 3.51
RPP38-201ENST00000378197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.94■■■■□ 3.5
RPP38-201ENST00000378197 COL17A1Q9UMD9 1497 aaPredicted RBP36.9■■■■□ 3.5
RPP38-201ENST00000378197 TROQ12816 1431 aaPredicted RBP36.89■■■■□ 3.5
RPP38-201ENST00000378197 TTC37Q6PGP7 1564 aa36.88■■■■□ 3.5
RPP38-201ENST00000378197 KIF14Q15058 1648 aa36.83■■■■□ 3.49
RPP38-201ENST00000378197 NEO1Q92859 1461 aa36.77■■■■□ 3.48
RPP38-201ENST00000378197 PHLDB1Q86UU1 1377 aa36.75■■■■□ 3.47
RPP38-201ENST00000378197 VPS8Q8N3P4 1428 aa36.74■■■■□ 3.47
RPP38-201ENST00000378197 ARAP3Q8WWN8 1544 aa36.73■■■■□ 3.47
RPP38-201ENST00000378197 FANCAO15360 1455 aa36.71■■■■□ 3.47
RPP38-201ENST00000378197 PLCH2O75038 1416 aa36.7■■■■□ 3.47
RPP38-201ENST00000378197 MYO5CQ9NQX4 1742 aa36.69■■■■□ 3.46
RPP38-201ENST00000378197 CFAP74Q9C0B2 1584 aa36.68■■■■□ 3.46
RPP38-201ENST00000378197 AKNAQ7Z591 1439 aa36.64■■■■□ 3.46
RPP38-201ENST00000378197 MTUS2Q5JR59 1369 aa36.61■■■■□ 3.45
RPP38-201ENST00000378197 RAPGEF3O95398 923 aa36.56■■■■□ 3.44
RPP38-201ENST00000378197 EFCAB2Q5VUJ9 269 aa36.56■■■■□ 3.44
RPP38-201ENST00000378197 ARHGAP5Q13017 1502 aa36.55■■■■□ 3.44
RPP38-201ENST00000378197 EHBP1L1Q8N3D4 1523 aa36.54■■■■□ 3.44
RPP38-201ENST00000378197 TIAM1Q13009 1591 aa36.53■■■■□ 3.44
RPP38-201ENST00000378197 PREX2Q70Z35 1606 aa36.53■■■■□ 3.44
RPP38-201ENST00000378197 DENND4BO75064 1496 aaPredicted RBP36.52■■■■□ 3.44
RPP38-201ENST00000378197 FRMPD1Q5SYB0 1578 aa36.52■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms