RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 ERCC6L2Q5T890 1561 aa34.47■■■■□ 3.11
TRIM13-203ENST00000378183 KIAA0586Q9BVV6 1533 aa34.46■■■■□ 3.11
TRIM13-203ENST00000378183 PRXQ9BXM0 1461 aa34.45■■■■□ 3.1
TRIM13-203ENST00000378183 CYB5RLQ6IPT4 315 aa34.42■■■■□ 3.1
TRIM13-203ENST00000378183 JPH4Q96JJ6 628 aa34.42■■■■□ 3.1
TRIM13-203ENST00000378183 EEA1Q15075 1411 aa34.41■■■■□ 3.1
TRIM13-203ENST00000378183 CSRNP3Q8WYN3 585 aa34.4■■■■□ 3.1
TRIM13-203ENST00000378183 PRG4Q92954 1404 aaPredicted RBP34.36■■■■□ 3.09
TRIM13-203ENST00000378183 FAM9AQ8IZU1 332 aaPredicted RBP34.32■■■■□ 3.08
TRIM13-203ENST00000378183 IQGAP2Q13576 1575 aa34.29■■■■□ 3.08
TRIM13-203ENST00000378183 CTTNBP2Q8WZ74 1663 aa34.25■■■■□ 3.07
TRIM13-203ENST00000378183 KIF21BO75037 1637 aa34.12■■■■□ 3.05
TRIM13-203ENST00000378183 UGGT2Q9NYU1 1516 aa34.12■■■■□ 3.05
TRIM13-203ENST00000378183 DISP1Q96F81 1524 aa34.08■■■■□ 3.05
TRIM13-203ENST00000378183 CARMIL2Q6F5E8 1435 aa34.04■■■■□ 3.04
TRIM13-203ENST00000378183 KIAA0556O60303 1618 aa33.98■■■■□ 3.03
TRIM13-203ENST00000378183 TNIKQ9UKE5 1360 aa33.97■■■■□ 3.03
TRIM13-203ENST00000378183 PTPRGP23470 1445 aa33.94■■■■□ 3.02
TRIM13-203ENST00000378183 GOLGA3Q08378 1498 aa33.88■■■■□ 3.01
TRIM13-203ENST00000378183 TTBK1Q5TCY1 1321 aaPredicted RBP33.88■■■■□ 3.01
TRIM13-203ENST00000378183 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
TRIM13-203ENST00000378183 ADCY10Q96PN6 1610 aa33.87■■■■□ 3.01
TRIM13-203ENST00000378183 SAMD9Q5K651 1589 aa33.8■■■■□ 3
TRIM13-203ENST00000378183 UBTFP17480 764 aaKnown RBP33.77■■■■□ 3
TRIM13-203ENST00000378183 UACAQ9BZF9 1416 aa33.72■■■□□ 2.99
TRIM13-203ENST00000378183 RANGAP1P46060 587 aaPredicted RBP33.72■■■□□ 2.99
TRIM13-203ENST00000378183 P3H3Q8IVL6 736 aa33.72■■■□□ 2.99
TRIM13-203ENST00000378183 UHRF1BP1LA0JNW5 1464 aa33.7■■■□□ 2.99
TRIM13-203ENST00000378183 ABCC2Q92887 1545 aa33.68■■■□□ 2.98
TRIM13-203ENST00000378183 TRHP20396 242 aaPredicted RBP33.65■■■□□ 2.98
TRIM13-203ENST00000378183 PLB1Q6P1J6 1458 aa33.64■■■□□ 2.98
TRIM13-203ENST00000378183 NPM1P06748 294 aaKnown RBP eCLIP33.64■■■□□ 2.98
TRIM13-203ENST00000378183 ABCA8O94911 1581 aa33.62■■■□□ 2.97
TRIM13-203ENST00000378183 EFCAB5A4FU69 1503 aa33.61■■■□□ 2.97
TRIM13-203ENST00000378183 MAPKBP1O60336 1514 aa33.6■■■□□ 2.97
TRIM13-203ENST00000378183 FHOD3Q2V2M9 1422 aa33.58■■■□□ 2.97
TRIM13-203ENST00000378183 KDM5BQ9UGL1 1544 aa33.55■■■□□ 2.96
TRIM13-203ENST00000378183 ZCCHC11Q5TAX3 1644 aaKnown RBP33.51■■■□□ 2.96
TRIM13-203ENST00000378183 KIF13AQ9H1H9 1805 aa33.51■■■□□ 2.95
TRIM13-203ENST00000378183 ARHGAP35Q9NRY4 1499 aa33.5■■■□□ 2.95
TRIM13-203ENST00000378183 RAPGEF6Q8TEU7 1601 aa33.45■■■□□ 2.95
TRIM13-203ENST00000378183 ABCC10Q5T3U5 1492 aa33.44■■■□□ 2.94
TRIM13-203ENST00000378183 ASXL2Q76L83 1435 aa33.42■■■□□ 2.94
TRIM13-203ENST00000378183 DIP2BQ9P265 1576 aa33.41■■■□□ 2.94
TRIM13-203ENST00000378183 ATP10BO94823 1461 aa33.34■■■□□ 2.93
TRIM13-203ENST00000378183 FAM69CQ0P6D2 419 aa33.34■■■□□ 2.93
TRIM13-203ENST00000378183 NUP153P49790 1475 aaKnown RBP33.32■■■□□ 2.92
TRIM13-203ENST00000378183 LOC105371045A0A1W2PR82 267 aa33.32■■■□□ 2.92
TRIM13-203ENST00000378183 ARID3CA6NKF2 412 aa33.32■■■□□ 2.92
TRIM13-203ENST00000378183 CLIP1P30622 1438 aa33.28■■■□□ 2.92
TRIM13-203ENST00000378183 FMN1Q68DA7 1419 aa33.28■■■□□ 2.92
TRIM13-203ENST00000378183 WDR7Q9Y4E6 1490 aa33.25■■■□□ 2.91
TRIM13-203ENST00000378183 EPRSP07814 1512 aaKnown RBP33.24■■■□□ 2.91
TRIM13-203ENST00000378183 GLI2P10070 1586 aa33.24■■■□□ 2.91
TRIM13-203ENST00000378183 TSPOAP1O95153 1857 aa33.17■■■□□ 2.9
TRIM13-203ENST00000378183 CEP162Q5TB80 1403 aa33.16■■■□□ 2.9
TRIM13-203ENST00000378183 HECW1Q76N89 1606 aa33.14■■■□□ 2.9
TRIM13-203ENST00000378183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.12■■■□□ 2.89
TRIM13-203ENST00000378183 HNRNPUL2Q1KMD3 747 aaKnown RBP33.12■■■□□ 2.89
TRIM13-203ENST00000378183 MAP3K4Q9Y6R4 1608 aa33.11■■■□□ 2.89
TRIM13-203ENST00000378183 KCNH8Q96L42 1107 aa33.11■■■□□ 2.89
TRIM13-203ENST00000378183 CDK13Q14004 1512 aaKnown RBP33.11■■■□□ 2.89
TRIM13-203ENST00000378183 LRRIQ1Q96JM4 1722 aa33.1■■■□□ 2.89
TRIM13-203ENST00000378183 PPRC1Q5VV67 1664 aaKnown RBP33.09■■■□□ 2.89
TRIM13-203ENST00000378183 PCF11O94913 1555 aaKnown RBP33.09■■■□□ 2.89
TRIM13-203ENST00000378183 ATP1B4Q9UN42 357 aaPredicted RBP33.08■■■□□ 2.89
TRIM13-203ENST00000378183 CASKIN1Q8WXD9 1431 aa33.06■■■□□ 2.88
TRIM13-203ENST00000378183 CFAP43Q8NDM7 1665 aa33.01■■■□□ 2.88
TRIM13-203ENST00000378183 PLEKHD1A6NEE1 506 aa32.99■■■□□ 2.87
TRIM13-203ENST00000378183 FYCO1Q9BQS8 1478 aa32.97■■■□□ 2.87
TRIM13-203ENST00000378183 ABCA9Q8IUA7 1624 aa32.95■■■□□ 2.87
TRIM13-203ENST00000378183 CD109Q6YHK3 1445 aa32.94■■■□□ 2.86
TRIM13-203ENST00000378183 CCDC18Q5T9S5 1454 aa32.89■■■□□ 2.86
TRIM13-203ENST00000378183 MAGI3Q5TCQ9 1506 aa32.88■■■□□ 2.85
TRIM13-203ENST00000378183 TEX14Q8IWB6 1497 aa32.86■■■□□ 2.85
TRIM13-203ENST00000378183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.84■■■□□ 2.85
TRIM13-203ENST00000378183 CDK11AQ9UQ88 783 aaPredicted RBP32.83■■■□□ 2.85
TRIM13-203ENST00000378183 KDM6BO15054 1643 aa32.83■■■□□ 2.85
TRIM13-203ENST00000378183 TTC37Q6PGP7 1564 aa32.8■■■□□ 2.84
TRIM13-203ENST00000378183 TROQ12816 1431 aaPredicted RBP32.8■■■□□ 2.84
TRIM13-203ENST00000378183 KIF14Q15058 1648 aa32.78■■■□□ 2.84
TRIM13-203ENST00000378183 COL17A1Q9UMD9 1497 aaPredicted RBP32.75■■■□□ 2.83
TRIM13-203ENST00000378183 VPS8Q8N3P4 1428 aa32.75■■■□□ 2.83
TRIM13-203ENST00000378183 MYO5CQ9NQX4 1742 aa32.63■■■□□ 2.81
TRIM13-203ENST00000378183 NEO1Q92859 1461 aa32.63■■■□□ 2.81
TRIM13-203ENST00000378183 PLCH2O75038 1416 aa32.61■■■□□ 2.81
TRIM13-203ENST00000378183 ARAP3Q8WWN8 1544 aa32.61■■■□□ 2.81
TRIM13-203ENST00000378183 PHLDB1Q86UU1 1377 aa32.59■■■□□ 2.81
TRIM13-203ENST00000378183 FANCAO15360 1455 aa32.58■■■□□ 2.81
TRIM13-203ENST00000378183 TIAM1Q13009 1591 aa32.57■■■□□ 2.8
TRIM13-203ENST00000378183 CFAP74Q9C0B2 1584 aa32.56■■■□□ 2.8
TRIM13-203ENST00000378183 MTUS2Q5JR59 1369 aa32.55■■■□□ 2.8
TRIM13-203ENST00000378183 CDC42BPBQ9Y5S2 1711 aa32.54■■■□□ 2.8
TRIM13-203ENST00000378183 AKNAQ7Z591 1439 aa32.53■■■□□ 2.8
TRIM13-203ENST00000378183 EHBP1L1Q8N3D4 1523 aa32.52■■■□□ 2.8
TRIM13-203ENST00000378183 CDC42BPAQ5VT25 1732 aa32.51■■■□□ 2.8
TRIM13-203ENST00000378183 PREX2Q70Z35 1606 aa32.5■■■□□ 2.79
TRIM13-203ENST00000378183 MAP3K1Q13233 1512 aa32.47■■■□□ 2.79
TRIM13-203ENST00000378183 ARHGAP5Q13017 1502 aa32.46■■■□□ 2.79
TRIM13-203ENST00000378183 EFCAB2Q5VUJ9 269 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms