RNA–Protein interactions for RNA: ENST00000377891.6

SLC3A2-204, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2 BASIC

Gene SLC3A2, Length 2,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-204ENST00000377891 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
SLC3A2-204ENST00000377891 APLP2Q06481 763 aa24.48■■□□□ 1.51
SLC3A2-204ENST00000377891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
SLC3A2-204ENST00000377891 P3H3Q8IVL6 736 aa24.45■■□□□ 1.5
SLC3A2-204ENST00000377891 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
SLC3A2-204ENST00000377891 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
SLC3A2-204ENST00000377891 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
SLC3A2-204ENST00000377891 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
SLC3A2-204ENST00000377891 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
SLC3A2-204ENST00000377891 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
SLC3A2-204ENST00000377891 KANK4Q5T7N3 995 aaPredicted RBP24.37■■□□□ 1.49
SLC3A2-204ENST00000377891 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
SLC3A2-204ENST00000377891 PCF11O94913 1555 aaKnown RBP24.33■■□□□ 1.48
SLC3A2-204ENST00000377891 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.48
SLC3A2-204ENST00000377891 SAMD9Q5K651 1589 aa24.27■■□□□ 1.48
SLC3A2-204ENST00000377891 TIAM1Q13009 1591 aa24.24■■□□□ 1.47
SLC3A2-204ENST00000377891 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
SLC3A2-204ENST00000377891 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
SLC3A2-204ENST00000377891 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.47
SLC3A2-204ENST00000377891 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
SLC3A2-204ENST00000377891 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
SLC3A2-204ENST00000377891 CFAP43Q8NDM7 1665 aa24.17■■□□□ 1.46
SLC3A2-204ENST00000377891 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
SLC3A2-204ENST00000377891 CASKIN1Q8WXD9 1431 aa24.15■■□□□ 1.46
SLC3A2-204ENST00000377891 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
SLC3A2-204ENST00000377891 MAP3K1Q13233 1512 aa24.14■■□□□ 1.46
SLC3A2-204ENST00000377891 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
SLC3A2-204ENST00000377891 LRRC9Q6ZRR7 1453 aa24.12■■□□□ 1.45
SLC3A2-204ENST00000377891 SYNJ2O15056 1496 aa24.09■■□□□ 1.45
SLC3A2-204ENST00000377891 FBLN2P98095 1184 aa24.08■■□□□ 1.45
SLC3A2-204ENST00000377891 LRRIQ1Q96JM4 1722 aa24.07■■□□□ 1.44
SLC3A2-204ENST00000377891 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
SLC3A2-204ENST00000377891 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
SLC3A2-204ENST00000377891 KIAA0586Q9BVV6 1533 aa24.06■■□□□ 1.44
SLC3A2-204ENST00000377891 UGGT2Q9NYU1 1516 aa24.05■■□□□ 1.44
SLC3A2-204ENST00000377891 RRBP1Q9P2E9 1410 aaKnown RBP24.04■■□□□ 1.44
SLC3A2-204ENST00000377891 DIEXFQ68CQ4 756 aaKnown RBP24.02■■□□□ 1.44
SLC3A2-204ENST00000377891 PHLDB1Q86UU1 1377 aa24■■□□□ 1.43
SLC3A2-204ENST00000377891 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
SLC3A2-204ENST00000377891 KIAA0556O60303 1618 aa23.98■■□□□ 1.43
SLC3A2-204ENST00000377891 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
SLC3A2-204ENST00000377891 NUP160Q12769 1436 aa23.93■■□□□ 1.42
SLC3A2-204ENST00000377891 ACIN1Q9UKV3 1341 aaKnown RBP23.92■■□□□ 1.42
SLC3A2-204ENST00000377891 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
SLC3A2-204ENST00000377891 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
SLC3A2-204ENST00000377891 ARID3CA6NKF2 412 aa23.89■■□□□ 1.41
SLC3A2-204ENST00000377891 ITGAEP38570 1179 aa23.89■■□□□ 1.41
SLC3A2-204ENST00000377891 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
SLC3A2-204ENST00000377891 MAGI3Q5TCQ9 1506 aa23.87■■□□□ 1.41
SLC3A2-204ENST00000377891 CDK13Q14004 1512 aaKnown RBP23.86■■□□□ 1.41
SLC3A2-204ENST00000377891 CHD1O14646 1710 aa23.85■■□□□ 1.41
SLC3A2-204ENST00000377891 EPRSP07814 1512 aaKnown RBP23.83■■□□□ 1.41
SLC3A2-204ENST00000377891 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.4
SLC3A2-204ENST00000377891 FAM50AQ14320 339 aaKnown RBP23.8■■□□□ 1.4
SLC3A2-204ENST00000377891 EHBP1L1Q8N3D4 1523 aa23.8■■□□□ 1.4
SLC3A2-204ENST00000377891 ZNF316A6NFI3 1004 aaPredicted RBP23.8■■□□□ 1.4
SLC3A2-204ENST00000377891 JPH4Q96JJ6 628 aa23.8■■□□□ 1.4
SLC3A2-204ENST00000377891 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
SLC3A2-204ENST00000377891 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
SLC3A2-204ENST00000377891 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
SLC3A2-204ENST00000377891 SUPT6HQ7KZ85 1726 aaKnown RBP23.77■■□□□ 1.39
SLC3A2-204ENST00000377891 NUP153P49790 1475 aaKnown RBP23.76■■□□□ 1.39
SLC3A2-204ENST00000377891 FGD6Q6ZV73 1430 aa23.74■■□□□ 1.39
SLC3A2-204ENST00000377891 PLB1Q6P1J6 1458 aa23.74■■□□□ 1.39
SLC3A2-204ENST00000377891 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
SLC3A2-204ENST00000377891 CENPBP07199 599 aaPredicted RBP23.71■■□□□ 1.39
SLC3A2-204ENST00000377891 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
SLC3A2-204ENST00000377891 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
SLC3A2-204ENST00000377891 PRG4Q92954 1404 aaPredicted RBP23.66■■□□□ 1.38
SLC3A2-204ENST00000377891 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
SLC3A2-204ENST00000377891 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
SLC3A2-204ENST00000377891 RAB3GAP2Q9H2M9 1393 aa23.62■■□□□ 1.37
SLC3A2-204ENST00000377891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
SLC3A2-204ENST00000377891 PTPN23Q9H3S7 1636 aa23.6■■□□□ 1.37
SLC3A2-204ENST00000377891 ABCA8O94911 1581 aa23.58■■□□□ 1.37
SLC3A2-204ENST00000377891 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
SLC3A2-204ENST00000377891 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
SLC3A2-204ENST00000377891 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
SLC3A2-204ENST00000377891 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
SLC3A2-204ENST00000377891 PTPRGP23470 1445 aa23.51■■□□□ 1.35
SLC3A2-204ENST00000377891 MIER1Q8N108 512 aa23.5■■□□□ 1.35
SLC3A2-204ENST00000377891 KIF14Q15058 1648 aa23.49■■□□□ 1.35
SLC3A2-204ENST00000377891 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
SLC3A2-204ENST00000377891 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
SLC3A2-204ENST00000377891 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
SLC3A2-204ENST00000377891 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
SLC3A2-204ENST00000377891 ATP10BO94823 1461 aa23.46■■□□□ 1.35
SLC3A2-204ENST00000377891 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
SLC3A2-204ENST00000377891 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
SLC3A2-204ENST00000377891 MAPKBP1O60336 1514 aa23.42■■□□□ 1.34
SLC3A2-204ENST00000377891 ADCY10Q96PN6 1610 aa23.42■■□□□ 1.34
SLC3A2-204ENST00000377891 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
SLC3A2-204ENST00000377891 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
SLC3A2-204ENST00000377891 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
SLC3A2-204ENST00000377891 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
SLC3A2-204ENST00000377891 UACAQ9BZF9 1416 aa23.37■■□□□ 1.33
SLC3A2-204ENST00000377891 NAIPQ13075 1403 aa23.36■■□□□ 1.33
SLC3A2-204ENST00000377891 GPATCH8Q9UKJ3 1502 aaKnown RBP23.34■■□□□ 1.33
SLC3A2-204ENST00000377891 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
SLC3A2-204ENST00000377891 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms