RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 TSPY10P0CW01 314 aa7.97□□□□□ -1.13
CUBN-202ENST00000377833 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
CUBN-202ENST00000377833 BECN1Q14457 450 aa7.97□□□□□ -1.13
CUBN-202ENST00000377833 CASC1Q6TDU7 716 aa7.96□□□□□ -1.13
CUBN-202ENST00000377833 GOLGA6L22H0YM25 854 aa7.96□□□□□ -1.14
CUBN-202ENST00000377833 DDRGK1Q96HY6 314 aa7.95□□□□□ -1.14
CUBN-202ENST00000377833 ANO8Q9HCE9 1232 aaPredicted RBP7.94□□□□□ -1.14
CUBN-202ENST00000377833 VPS8Q8N3P4 1428 aa7.94□□□□□ -1.14
CUBN-202ENST00000377833 CDK11BP21127 795 aaKnown RBP7.94□□□□□ -1.14
CUBN-202ENST00000377833 ROCK2O75116 1388 aaKnown RBP7.93□□□□□ -1.14
CUBN-202ENST00000377833 PNNQ9H307 717 aaKnown RBP7.93□□□□□ -1.14
CUBN-202ENST00000377833 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
CUBN-202ENST00000377833 PHLDB1Q86UU1 1377 aa7.93□□□□□ -1.14
CUBN-202ENST00000377833 UACAQ9BZF9 1416 aa7.92□□□□□ -1.14
CUBN-202ENST00000377833 SCAPERQ9BY12 1400 aa7.92□□□□□ -1.14
CUBN-202ENST00000377833 ZNF326Q5BKZ1 582 aaKnown RBP7.92□□□□□ -1.14
CUBN-202ENST00000377833 ERICH3Q5RHP9 1530 aa7.92□□□□□ -1.14
CUBN-202ENST00000377833 HMGXB3Q12766 1538 aa7.91□□□□□ -1.14
CUBN-202ENST00000377833 FBLN2P98095 1184 aa7.91□□□□□ -1.14
CUBN-202ENST00000377833 PTMSP20962 102 aa7.91□□□□□ -1.14
CUBN-202ENST00000377833 ERICH6BQ5W0A0 696 aa7.91□□□□□ -1.14
CUBN-202ENST00000377833 GOLGA6L6A8MZA4 724 aa7.91□□□□□ -1.14
CUBN-202ENST00000377833 PRDM2Q13029 1718 aa7.91□□□□□ -1.14
CUBN-202ENST00000377833 KIF21BO75037 1637 aa7.9□□□□□ -1.14
CUBN-202ENST00000377833 WDR43Q15061 677 aaKnown RBP eCLIP7.9□□□□□ -1.14
CUBN-202ENST00000377833 STAG3Q9UJ98 1225 aa7.9□□□□□ -1.14
CUBN-202ENST00000377833 NRDCO43847 1150 aa7.9□□□□□ -1.14
CUBN-202ENST00000377833 CCNB3Q8WWL7 1395 aa7.89□□□□□ -1.15
CUBN-202ENST00000377833 EFCAB5A4FU69 1503 aa7.89□□□□□ -1.15
CUBN-202ENST00000377833 HDGFP51858 240 aaKnown RBP7.89□□□□□ -1.15
CUBN-202ENST00000377833 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.15
CUBN-202ENST00000377833 KIF21AQ7Z4S6 1674 aa7.89□□□□□ -1.15
CUBN-202ENST00000377833 CHMP7Q8WUX9 453 aaPredicted RBP7.88□□□□□ -1.15
CUBN-202ENST00000377833 NPM2Q86SE8 214 aaKnown RBP7.88□□□□□ -1.15
CUBN-202ENST00000377833 EIF4G2P78344 907 aaKnown RBP eCLIP7.88□□□□□ -1.15
CUBN-202ENST00000377833 CUL7Q14999 1698 aa7.86□□□□□ -1.15
CUBN-202ENST00000377833 L1TD1Q5T7N2 865 aaKnown RBP7.86□□□□□ -1.15
CUBN-202ENST00000377833 PLEKHD1A6NEE1 506 aa7.86□□□□□ -1.15
CUBN-202ENST00000377833 HDAC5Q9UQL6 1122 aa7.86□□□□□ -1.15
CUBN-202ENST00000377833 ZRSR1Q15695 479 aaKnown RBP7.85□□□□□ -1.15
CUBN-202ENST00000377833 NCLP19338 710 aaKnown RBP7.85□□□□□ -1.15
CUBN-202ENST00000377833 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
CUBN-202ENST00000377833 CALD1Q05682 793 aaKnown RBP7.84□□□□□ -1.15
CUBN-202ENST00000377833 BCANQ96GW7 911 aa7.84□□□□□ -1.15
CUBN-202ENST00000377833 LOC105371045A0A1W2PR82 267 aa7.84□□□□□ -1.15
CUBN-202ENST00000377833 RSPH4AQ5TD94 716 aa7.84□□□□□ -1.16
CUBN-202ENST00000377833 TRIM44Q96DX7 344 aaPredicted RBP7.83□□□□□ -1.16
CUBN-202ENST00000377833 KNSTRNQ9Y448 316 aa7.83□□□□□ -1.16
CUBN-202ENST00000377833 SCAF1Q9H7N4 1312 aaKnown RBP7.83□□□□□ -1.16
CUBN-202ENST00000377833 HECW1Q76N89 1606 aa7.83□□□□□ -1.16
CUBN-202ENST00000377833 CCDC136Q96JN2 1154 aa7.82□□□□□ -1.16
CUBN-202ENST00000377833 SUPT6HQ7KZ85 1726 aaKnown RBP7.82□□□□□ -1.16
CUBN-202ENST00000377833 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
CUBN-202ENST00000377833 TNNT2P45379 298 aaPredicted RBP7.81□□□□□ -1.16
CUBN-202ENST00000377833 NUDCQ9Y266 331 aa7.81□□□□□ -1.16
CUBN-202ENST00000377833 EIF4G1Q04637 1599 aaKnown RBP7.81□□□□□ -1.16
CUBN-202ENST00000377833 RAPGEF2Q9Y4G8 1499 aa7.8□□□□□ -1.16
CUBN-202ENST00000377833 CUX2O14529 1486 aa7.8□□□□□ -1.16
CUBN-202ENST00000377833 PPP1R15AO75807 674 aaPredicted RBP7.8□□□□□ -1.16
CUBN-202ENST00000377833 WIZO95785 1651 aa7.8□□□□□ -1.16
CUBN-202ENST00000377833 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
CUBN-202ENST00000377833 NGEFQ8N5V2 710 aa7.8□□□□□ -1.16
CUBN-202ENST00000377833 ZNF777Q9ULD5 760 aaPredicted RBP7.8□□□□□ -1.16
CUBN-202ENST00000377833 KTN1Q86UP2 1357 aaKnown RBP7.8□□□□□ -1.16
CUBN-202ENST00000377833 CFDP1Q9UEE9 299 aaPredicted RBP7.79□□□□□ -1.16
CUBN-202ENST00000377833 SETD5Q9C0A6 1442 aa7.79□□□□□ -1.16
CUBN-202ENST00000377833 STAC3Q96MF2 364 aa7.79□□□□□ -1.16
CUBN-202ENST00000377833 WWC1Q8IX03 1113 aa7.79□□□□□ -1.16
CUBN-202ENST00000377833 CHMP4CQ96CF2 233 aa7.79□□□□□ -1.16
CUBN-202ENST00000377833 ANKRD30AQ9BXX3 1397 aa7.78□□□□□ -1.16
CUBN-202ENST00000377833 CC2D2AQ9P2K1 1620 aa7.78□□□□□ -1.16
CUBN-202ENST00000377833 MRS2Q9HD23 443 aa7.78□□□□□ -1.16
CUBN-202ENST00000377833 CCDC34Q96HJ3 373 aa7.78□□□□□ -1.16
CUBN-202ENST00000377833 HNRNPUQ00839 825 aaKnown RBP eCLIP7.77□□□□□ -1.16
CUBN-202ENST00000377833 PPARGC1BQ86YN6 1023 aaKnown RBP7.77□□□□□ -1.17
CUBN-202ENST00000377833 FYCO1Q9BQS8 1478 aa7.77□□□□□ -1.17
CUBN-202ENST00000377833 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
CUBN-202ENST00000377833 MAPK8IP3Q9UPT6 1336 aa7.76□□□□□ -1.17
CUBN-202ENST00000377833 PLEKHH2Q8IVE3 1493 aa7.76□□□□□ -1.17
CUBN-202ENST00000377833 CARMIL1Q5VZK9 1371 aa7.76□□□□□ -1.17
CUBN-202ENST00000377833 ITSN2Q9NZM3 1697 aa7.76□□□□□ -1.17
CUBN-202ENST00000377833 CHAF1AQ13111 956 aaPredicted RBP7.76□□□□□ -1.17
CUBN-202ENST00000377833 THOC2Q8NI27 1593 aaKnown RBP7.76□□□□□ -1.17
CUBN-202ENST00000377833 EHBP1L1Q8N3D4 1523 aa7.75□□□□□ -1.17
CUBN-202ENST00000377833 AAMPQ13685 434 aa7.75□□□□□ -1.17
CUBN-202ENST00000377833 FTSJ3Q8IY81 847 aaKnown RBP7.75□□□□□ -1.17
CUBN-202ENST00000377833 CCDC88BA6NC98 1476 aa7.74□□□□□ -1.17
CUBN-202ENST00000377833 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
CUBN-202ENST00000377833 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
CUBN-202ENST00000377833 MCCP23508 829 aa7.73□□□□□ -1.17
CUBN-202ENST00000377833 MROH2BQ7Z745 1585 aa7.73□□□□□ -1.17
CUBN-202ENST00000377833 CCER2I3L3R5 266 aa7.73□□□□□ -1.17
CUBN-202ENST00000377833 HMGB2P26583 209 aaKnown RBP7.71□□□□□ -1.17
CUBN-202ENST00000377833 RALBP1Q15311 655 aa7.71□□□□□ -1.18
CUBN-202ENST00000377833 SYAP1Q96A49 352 aaPredicted RBP7.7□□□□□ -1.18
CUBN-202ENST00000377833 CADPSQ9ULU8 1353 aa7.7□□□□□ -1.18
CUBN-202ENST00000377833 AEBP2Q6ZN18 517 aaPredicted RBP7.7□□□□□ -1.18
CUBN-202ENST00000377833 KIF3AQ9Y496 699 aa7.7□□□□□ -1.18
CUBN-202ENST00000377833 IPO8O15397 1037 aaKnown RBP7.69□□□□□ -1.18
CUBN-202ENST00000377833 WDR97A6NE52 1622 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms