RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
SMARCE1-203ENST00000377808 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
SMARCE1-203ENST00000377808 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
SMARCE1-203ENST00000377808 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
SMARCE1-203ENST00000377808 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
SMARCE1-203ENST00000377808 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.73
SMARCE1-203ENST00000377808 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
SMARCE1-203ENST00000377808 TTBK1Q5TCY1 1321 aaPredicted RBP19.49■□□□□ 0.71
SMARCE1-203ENST00000377808 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
SMARCE1-203ENST00000377808 CARMIL2Q6F5E8 1435 aa19.43■□□□□ 0.7
SMARCE1-203ENST00000377808 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
SMARCE1-203ENST00000377808 PTPRGP23470 1445 aa19.38■□□□□ 0.69
SMARCE1-203ENST00000377808 NPM1P06748 294 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMARCE1-203ENST00000377808 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
SMARCE1-203ENST00000377808 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
SMARCE1-203ENST00000377808 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
SMARCE1-203ENST00000377808 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
SMARCE1-203ENST00000377808 ADCY10Q96PN6 1610 aa19.34■□□□□ 0.69
SMARCE1-203ENST00000377808 DISP1Q96F81 1524 aa19.33■□□□□ 0.69
SMARCE1-203ENST00000377808 UGGT2Q9NYU1 1516 aa19.33■□□□□ 0.69
SMARCE1-203ENST00000377808 EEA1Q15075 1411 aa19.33■□□□□ 0.68
SMARCE1-203ENST00000377808 KIAA0556O60303 1618 aa19.3■□□□□ 0.68
SMARCE1-203ENST00000377808 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
SMARCE1-203ENST00000377808 UACAQ9BZF9 1416 aa19.23■□□□□ 0.67
SMARCE1-203ENST00000377808 MAPKBP1O60336 1514 aa19.23■□□□□ 0.67
SMARCE1-203ENST00000377808 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
SMARCE1-203ENST00000377808 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
SMARCE1-203ENST00000377808 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
SMARCE1-203ENST00000377808 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
SMARCE1-203ENST00000377808 KIF13AQ9H1H9 1805 aa19.2■□□□□ 0.66
SMARCE1-203ENST00000377808 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
SMARCE1-203ENST00000377808 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
SMARCE1-203ENST00000377808 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
SMARCE1-203ENST00000377808 DIP2BQ9P265 1576 aa19.16■□□□□ 0.66
SMARCE1-203ENST00000377808 KIF21BO75037 1637 aa19.15■□□□□ 0.66
SMARCE1-203ENST00000377808 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.65
SMARCE1-203ENST00000377808 ASXL2Q76L83 1435 aa19.13■□□□□ 0.65
SMARCE1-203ENST00000377808 ZCCHC11Q5TAX3 1644 aaKnown RBP19.1■□□□□ 0.65
SMARCE1-203ENST00000377808 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
SMARCE1-203ENST00000377808 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
SMARCE1-203ENST00000377808 SAMD9Q5K651 1589 aa19.08■□□□□ 0.65
SMARCE1-203ENST00000377808 ABCA8O94911 1581 aa19.07■□□□□ 0.64
SMARCE1-203ENST00000377808 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
SMARCE1-203ENST00000377808 TSPOAP1O95153 1857 aa19.06■□□□□ 0.64
SMARCE1-203ENST00000377808 FHOD3Q2V2M9 1422 aa19.04■□□□□ 0.64
SMARCE1-203ENST00000377808 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
SMARCE1-203ENST00000377808 WDR7Q9Y4E6 1490 aa19■□□□□ 0.63
SMARCE1-203ENST00000377808 GLI2P10070 1586 aa18.98■□□□□ 0.63
SMARCE1-203ENST00000377808 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
SMARCE1-203ENST00000377808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
SMARCE1-203ENST00000377808 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
SMARCE1-203ENST00000377808 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
SMARCE1-203ENST00000377808 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
SMARCE1-203ENST00000377808 KDM6BO15054 1643 aa18.94■□□□□ 0.62
SMARCE1-203ENST00000377808 ATP10BO94823 1461 aa18.92■□□□□ 0.62
SMARCE1-203ENST00000377808 MAP3K4Q9Y6R4 1608 aa18.91■□□□□ 0.62
SMARCE1-203ENST00000377808 PPRC1Q5VV67 1664 aaKnown RBP18.9■□□□□ 0.62
SMARCE1-203ENST00000377808 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
SMARCE1-203ENST00000377808 TEX14Q8IWB6 1497 aa18.87■□□□□ 0.61
SMARCE1-203ENST00000377808 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
SMARCE1-203ENST00000377808 ARHGAP35Q9NRY4 1499 aa18.86■□□□□ 0.61
SMARCE1-203ENST00000377808 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
SMARCE1-203ENST00000377808 CFAP43Q8NDM7 1665 aa18.83■□□□□ 0.61
SMARCE1-203ENST00000377808 FMN1Q68DA7 1419 aa18.82■□□□□ 0.6
SMARCE1-203ENST00000377808 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
SMARCE1-203ENST00000377808 CDK13Q14004 1512 aaKnown RBP18.78■□□□□ 0.6
SMARCE1-203ENST00000377808 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
SMARCE1-203ENST00000377808 HECW1Q76N89 1606 aa18.77■□□□□ 0.6
SMARCE1-203ENST00000377808 ABCA9Q8IUA7 1624 aa18.75■□□□□ 0.59
SMARCE1-203ENST00000377808 COL17A1Q9UMD9 1497 aaPredicted RBP18.74■□□□□ 0.59
SMARCE1-203ENST00000377808 CLIP1P30622 1438 aa18.73■□□□□ 0.59
SMARCE1-203ENST00000377808 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
SMARCE1-203ENST00000377808 PCF11O94913 1555 aaKnown RBP18.67■□□□□ 0.58
SMARCE1-203ENST00000377808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMARCE1-203ENST00000377808 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.57
SMARCE1-203ENST00000377808 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.57
SMARCE1-203ENST00000377808 LRRIQ1Q96JM4 1722 aa18.62■□□□□ 0.57
SMARCE1-203ENST00000377808 NEO1Q92859 1461 aa18.62■□□□□ 0.57
SMARCE1-203ENST00000377808 ARAP3Q8WWN8 1544 aa18.61■□□□□ 0.57
SMARCE1-203ENST00000377808 CCDC18Q5T9S5 1454 aa18.61■□□□□ 0.57
SMARCE1-203ENST00000377808 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
SMARCE1-203ENST00000377808 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
SMARCE1-203ENST00000377808 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
SMARCE1-203ENST00000377808 FANCAO15360 1455 aa18.59■□□□□ 0.57
SMARCE1-203ENST00000377808 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
SMARCE1-203ENST00000377808 KIF14Q15058 1648 aa18.59■□□□□ 0.57
SMARCE1-203ENST00000377808 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.57
SMARCE1-203ENST00000377808 RAPGEF3O95398 923 aa18.58■□□□□ 0.57
SMARCE1-203ENST00000377808 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
SMARCE1-203ENST00000377808 AKNAQ7Z591 1439 aa18.56■□□□□ 0.56
SMARCE1-203ENST00000377808 KDM4FA0A1W2PPD8 638 aa18.56■□□□□ 0.56
SMARCE1-203ENST00000377808 ADGRL1O94910 1474 aa18.53■□□□□ 0.56
SMARCE1-203ENST00000377808 PLCH2O75038 1416 aa18.53■□□□□ 0.56
SMARCE1-203ENST00000377808 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
SMARCE1-203ENST00000377808 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.56
SMARCE1-203ENST00000377808 ARHGAP5Q13017 1502 aa18.5■□□□□ 0.55
SMARCE1-203ENST00000377808 FRMPD1Q5SYB0 1578 aa18.5■□□□□ 0.55
SMARCE1-203ENST00000377808 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
SMARCE1-203ENST00000377808 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
SMARCE1-203ENST00000377808 RICTORQ6R327 1708 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms