RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.13e-9■■■■□ 21.5
ATXN2-201ENST00000377617 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
ATXN2-201ENST00000377617 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
ATXN2-201ENST00000377617 CHAF1AQ13111 956 aaPredicted RBP21.82■■□□□ 1.08
ATXN2-201ENST00000377617 P3H3Q8IVL6 736 aa21.81■■□□□ 1.08
ATXN2-201ENST00000377617 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
ATXN2-201ENST00000377617 ZRSR1Q15695 479 aaKnown RBP21.79■■□□□ 1.08
ATXN2-201ENST00000377617 HIRIP3Q9BW71 556 aaPredicted RBP21.77■■□□□ 1.08
ATXN2-201ENST00000377617 B4GALNT3Q6L9W6 998 aa21.75■■□□□ 1.07
ATXN2-201ENST00000377617 TSHZ2Q9NRE2 1034 aa21.75■■□□□ 1.07
ATXN2-201ENST00000377617 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.74■■□□□ 1.07
ATXN2-201ENST00000377617 NRDCO43847 1150 aa21.73■■□□□ 1.07
ATXN2-201ENST00000377617 ZNF777Q9ULD5 760 aaPredicted RBP21.71■■□□□ 1.07
ATXN2-201ENST00000377617 CASC1Q6TDU7 716 aa21.69■■□□□ 1.06
ATXN2-201ENST00000377617 GOLGA6L6A8MZA4 724 aa21.68■■□□□ 1.06
ATXN2-201ENST00000377617 RGS3P49796 1198 aa21.67■■□□□ 1.06
ATXN2-201ENST00000377617 RSPH6AQ9H0K4 717 aa21.67■■□□□ 1.06
ATXN2-201ENST00000377617 PLCB2Q00722 1185 aa21.65■■□□□ 1.06
ATXN2-201ENST00000377617 HSP90AB1P08238 724 aaKnown RBP21.64■■□□□ 1.05
ATXN2-201ENST00000377617 CCER2I3L3R5 266 aa21.64■■□□□ 1.05
ATXN2-201ENST00000377617 PTMSP20962 102 aa21.6■■□□□ 1.05
ATXN2-201ENST00000377617 HSP90AA2PQ14568 343 aaPredicted RBP21.6■■□□□ 1.05
ATXN2-201ENST00000377617 HSCBQ8IWL3 235 aa21.6■■□□□ 1.05
ATXN2-201ENST00000377617 USP35Q9P2H5 1018 aa21.59■■□□□ 1.05
ATXN2-201ENST00000377617 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.05
ATXN2-201ENST00000377617 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.04
ATXN2-201ENST00000377617 TNNT3P45378 269 aaPredicted RBP21.57■■□□□ 1.04
ATXN2-201ENST00000377617 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
ATXN2-201ENST00000377617 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
ATXN2-201ENST00000377617 ARID3CA6NKF2 412 aa21.55■■□□□ 1.04
ATXN2-201ENST00000377617 CHIC2Q9UKJ5 165 aa21.54■■□□□ 1.04
ATXN2-201ENST00000377617 CHMP4BQ9H444 224 aaKnown RBP21.54■■□□□ 1.04
ATXN2-201ENST00000377617 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
ATXN2-201ENST00000377617 KIAA2012Q0VF49 1180 aa21.53■■□□□ 1.04
ATXN2-201ENST00000377617 KDM2AQ9Y2K7 1162 aa21.53■■□□□ 1.04
ATXN2-201ENST00000377617 MS4A1P11836 297 aa21.53■■□□□ 1.04
ATXN2-201ENST00000377617 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
ATXN2-201ENST00000377617 GBP4Q96PP9 640 aa21.5■■□□□ 1.03
ATXN2-201ENST00000377617 CLIP1P30622 1438 aa21.49■■□□□ 1.03
ATXN2-201ENST00000377617 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
ATXN2-201ENST00000377617 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
ATXN2-201ENST00000377617 GOLGA6L3A6NEY3 463 aa21.48■■□□□ 1.03
ATXN2-201ENST00000377617 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
ATXN2-201ENST00000377617 TIMELESSQ9UNS1 1208 aa21.46■■□□□ 1.03
ATXN2-201ENST00000377617 CDCA8Q53HL2 280 aa21.45■■□□□ 1.02
ATXN2-201ENST00000377617 CFAP44Q96MT7 982 aa21.45■■□□□ 1.02
ATXN2-201ENST00000377617 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
ATXN2-201ENST00000377617 GOLGA6L4A6NEF3 574 aa21.42■■□□□ 1.02
ATXN2-201ENST00000377617 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
ATXN2-201ENST00000377617 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
ATXN2-201ENST00000377617 KNSTRNQ9Y448 316 aa21.41■■□□□ 1.02
ATXN2-201ENST00000377617 TPRNQ4KMQ1 711 aa21.41■■□□□ 1.02
ATXN2-201ENST00000377617 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
ATXN2-201ENST00000377617 FBLN2P98095 1184 aa21.39■■□□□ 1.01
ATXN2-201ENST00000377617 DRC7Q8IY82 874 aa21.36■■□□□ 1.01
ATXN2-201ENST00000377617 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
ATXN2-201ENST00000377617 FRAT1Q92837 279 aaPredicted RBP21.36■■□□□ 1.01
ATXN2-201ENST00000377617 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
ATXN2-201ENST00000377617 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
ATXN2-201ENST00000377617 GZF1Q9H116 711 aaPredicted RBP21.34■■□□□ 1.01
ATXN2-201ENST00000377617 EEA1Q15075 1411 aa21.34■■□□□ 1.01
ATXN2-201ENST00000377617 ARID3AQ99856 593 aa21.34■■□□□ 1.01
ATXN2-201ENST00000377617 STAG3Q9UJ98 1225 aa21.33■■□□□ 1
ATXN2-201ENST00000377617 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
ATXN2-201ENST00000377617 SYAP1Q96A49 352 aaPredicted RBP21.31■■□□□ 1
ATXN2-201ENST00000377617 SLKQ9H2G2 1235 aaPredicted RBP21.31■■□□□ 1
ATXN2-201ENST00000377617 GSE1Q14687 1217 aa21.31■■□□□ 1
ATXN2-201ENST00000377617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 13e-7■■□□□ 13.5
ATXN2-201ENST00000377617 SPRYD3Q8NCJ5 442 aa21.27■■□□□ 1
ATXN2-201ENST00000377617 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
ATXN2-201ENST00000377617 MCCP23508 829 aa21.27■■□□□ 1
ATXN2-201ENST00000377617 RRP7BPQ9NSQ0 103 aa21.27■■□□□ 1
ATXN2-201ENST00000377617 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
ATXN2-201ENST00000377617 NUDCQ9Y266 331 aa21.24■□□□□ 0.99
ATXN2-201ENST00000377617 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
ATXN2-201ENST00000377617 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
ATXN2-201ENST00000377617 SIN3AQ96ST3 1273 aa21.22■□□□□ 0.99
ATXN2-201ENST00000377617 FGD1P98174 961 aa21.22■□□□□ 0.99
ATXN2-201ENST00000377617 CALD1Q05682 793 aaKnown RBP21.21■□□□□ 0.99
ATXN2-201ENST00000377617 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
ATXN2-201ENST00000377617 RCAN3Q9UKA8 241 aa21.2■□□□□ 0.98
ATXN2-201ENST00000377617 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
ATXN2-201ENST00000377617 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
ATXN2-201ENST00000377617 KCNJ4P48050 445 aa21.18■□□□□ 0.98
ATXN2-201ENST00000377617 GOLGA6L1Q8N7Z2 621 aa21.16■□□□□ 0.98
ATXN2-201ENST00000377617 DDX11L8A8MPP1 907 aa21.15■□□□□ 0.98
ATXN2-201ENST00000377617 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
ATXN2-201ENST00000377617 ZBTB7CA1YPR0 619 aa21.12■□□□□ 0.97
ATXN2-201ENST00000377617 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
ATXN2-201ENST00000377617 PKNOX2Q96KN3 472 aa21.09■□□□□ 0.97
ATXN2-201ENST00000377617 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
ATXN2-201ENST00000377617 PHF14O94880 888 aa21.08■□□□□ 0.97
ATXN2-201ENST00000377617 SKOR2Q2VWA4 1001 aaPredicted RBP21.08■□□□□ 0.96
ATXN2-201ENST00000377617 HAP1P54257 671 aaPredicted RBP21.06■□□□□ 0.96
ATXN2-201ENST00000377617 PMFBP1Q8TBY8 1022 aa21.06■□□□□ 0.96
ATXN2-201ENST00000377617 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
ATXN2-201ENST00000377617 MAP7D2Q96T17 732 aa21.05■□□□□ 0.96
ATXN2-201ENST00000377617 SETQ01105 290 aaPredicted RBP21.04■□□□□ 0.96
ATXN2-201ENST00000377617 IPO8O15397 1037 aaKnown RBP21.04■□□□□ 0.96
ATXN2-201ENST00000377617 CSPP1Q1MSJ5 1256 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms