RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
GPC5-201ENST00000377067 HNRNPUQ00839 825 aaKnown RBP eCLIP26.66■■□□□ 1.86
GPC5-201ENST00000377067 MYT1LQ9UL68 1186 aa26.63■■□□□ 1.85
GPC5-201ENST00000377067 SETD5Q9C0A6 1442 aa26.59■■□□□ 1.85
GPC5-201ENST00000377067 NBR1Q14596 966 aa26.58■■□□□ 1.85
GPC5-201ENST00000377067 ANO8Q9HCE9 1232 aaPredicted RBP26.55■■□□□ 1.84
GPC5-201ENST00000377067 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
GPC5-201ENST00000377067 UNC13AQ9UPW8 1703 aa26.5■■□□□ 1.83
GPC5-201ENST00000377067 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
GPC5-201ENST00000377067 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
GPC5-201ENST00000377067 PPP4R2Q9NY27 417 aa26.48■■□□□ 1.83
GPC5-201ENST00000377067 B4GALNT3Q6L9W6 998 aa26.47■■□□□ 1.83
GPC5-201ENST00000377067 PAK3O75914 559 aaPredicted RBP26.46■■□□□ 1.83
GPC5-201ENST00000377067 NOP58Q9Y2X3 529 aaKnown RBP26.45■■□□□ 1.82
GPC5-201ENST00000377067 ARHGAP35Q9NRY4 1499 aa26.42■■□□□ 1.82
GPC5-201ENST00000377067 TIMELESSQ9UNS1 1208 aa26.42■■□□□ 1.82
GPC5-201ENST00000377067 TOP2BQ02880 1626 aa26.39■■□□□ 1.82
GPC5-201ENST00000377067 PHLDB1Q86UU1 1377 aa26.36■■□□□ 1.81
GPC5-201ENST00000377067 ERICH6BQ5W0A0 696 aa26.34■■□□□ 1.81
GPC5-201ENST00000377067 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
GPC5-201ENST00000377067 TONSLQ96HA7 1378 aa26.31■■□□□ 1.8
GPC5-201ENST00000377067 CCDC184Q52MB2 194 aa26.28■■□□□ 1.8
GPC5-201ENST00000377067 TIAM1Q13009 1591 aa26.25■■□□□ 1.79
GPC5-201ENST00000377067 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
GPC5-201ENST00000377067 BICRAQ9NZM4 1560 aa26.22■■□□□ 1.79
GPC5-201ENST00000377067 IL27Q8NEV9 243 aa26.21■■□□□ 1.79
GPC5-201ENST00000377067 CCDC136Q96JN2 1154 aa26.21■■□□□ 1.79
GPC5-201ENST00000377067 LRRC9Q6ZRR7 1453 aa26.21■■□□□ 1.79
GPC5-201ENST00000377067 FAM9BQ8IZU0 186 aa26.2■■□□□ 1.79
GPC5-201ENST00000377067 RTL5Q5HYW3 569 aaPredicted RBP26.2■■□□□ 1.78
GPC5-201ENST00000377067 RTN4Q9NQC3 1192 aaKnown RBP26.2■■□□□ 1.78
GPC5-201ENST00000377067 BIVM-ERCC5R4GMW8 1640 aa26.19■■□□□ 1.78
GPC5-201ENST00000377067 ATP1B4Q9UN42 357 aaPredicted RBP26.18■■□□□ 1.78
GPC5-201ENST00000377067 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
GPC5-201ENST00000377067 ATAD2BQ9ULI0 1458 aa26.16■■□□□ 1.78
GPC5-201ENST00000377067 WASHC2AQ641Q2 1341 aa26.15■■□□□ 1.78
GPC5-201ENST00000377067 ANP32AP39687 249 aaKnown RBP26.12■■□□□ 1.77
GPC5-201ENST00000377067 IPO9Q96P70 1041 aaKnown RBP26.11■■□□□ 1.77
GPC5-201ENST00000377067 HSPA5P11021 654 aaKnown RBP26.09■■□□□ 1.77
GPC5-201ENST00000377067 ZBTB47Q9UFB7 747 aaPredicted RBP26.09■■□□□ 1.77
GPC5-201ENST00000377067 MAP3K1Q13233 1512 aa26.08■■□□□ 1.77
GPC5-201ENST00000377067 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
GPC5-201ENST00000377067 MRS2Q9HD23 443 aa26.06■■□□□ 1.76
GPC5-201ENST00000377067 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.05■■□□□ 1.76
GPC5-201ENST00000377067 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
GPC5-201ENST00000377067 CUX1P39880 1505 aa26.04■■□□□ 1.76
GPC5-201ENST00000377067 ZBED9Q6R2W3 1325 aa26.03■■□□□ 1.76
GPC5-201ENST00000377067 PRKRIP1Q9H875 184 aaPredicted RBP25.98■■□□□ 1.75
GPC5-201ENST00000377067 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
GPC5-201ENST00000377067 AKNAQ7Z591 1439 aa25.96■■□□□ 1.75
GPC5-201ENST00000377067 CNTLNQ9NXG0 1405 aa25.95■■□□□ 1.74
GPC5-201ENST00000377067 KDM5BQ9UGL1 1544 aa25.93■■□□□ 1.74
GPC5-201ENST00000377067 C11orf95C9JLR9 678 aaPredicted RBP25.92■■□□□ 1.74
GPC5-201ENST00000377067 NPM2Q86SE8 214 aaKnown RBP25.92■■□□□ 1.74
GPC5-201ENST00000377067 SENP3-EIF4A1A0A087X0R7 540 aa25.92■■□□□ 1.74
GPC5-201ENST00000377067 UACAQ9BZF9 1416 aa25.91■■□□□ 1.74
GPC5-201ENST00000377067 EIF4G2P78344 907 aaKnown RBP eCLIP25.91■■□□□ 1.743e-11■■■■■ 41.2
GPC5-201ENST00000377067 LAS1LQ9Y4W2 734 aaKnown RBP25.91■■□□□ 1.74
GPC5-201ENST00000377067 PCF11O94913 1555 aaKnown RBP25.88■■□□□ 1.73
GPC5-201ENST00000377067 CNGB1Q14028 1251 aaPredicted RBP25.88■■□□□ 1.73
GPC5-201ENST00000377067 AQRO60306 1485 aaKnown RBP eCLIP25.88■■□□□ 1.73
GPC5-201ENST00000377067 IGF1RP08069 1367 aa25.87■■□□□ 1.73
GPC5-201ENST00000377067 NCOA2Q15596 1464 aa25.87■■□□□ 1.73
GPC5-201ENST00000377067 PTPRKQ15262 1439 aa25.86■■□□□ 1.73
GPC5-201ENST00000377067 CFAP43Q8NDM7 1665 aa25.85■■□□□ 1.73
GPC5-201ENST00000377067 NEFMP07197 916 aa25.84■■□□□ 1.73
GPC5-201ENST00000377067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.72
GPC5-201ENST00000377067 HFM1A2PYH4 1435 aa25.8■■□□□ 1.72
GPC5-201ENST00000377067 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
GPC5-201ENST00000377067 FGD6Q6ZV73 1430 aa25.8■■□□□ 1.72
GPC5-201ENST00000377067 CARMIL1Q5VZK9 1371 aa25.8■■□□□ 1.72
GPC5-201ENST00000377067 FHOD3Q2V2M9 1422 aa25.78■■□□□ 1.72
GPC5-201ENST00000377067 SMG6Q86US8 1419 aaKnown RBP25.78■■□□□ 1.72
GPC5-201ENST00000377067 NUDCQ9Y266 331 aa25.78■■□□□ 1.72
GPC5-201ENST00000377067 PTPN23Q9H3S7 1636 aa25.77■■□□□ 1.72
GPC5-201ENST00000377067 NAIPQ13075 1403 aa25.75■■□□□ 1.71
GPC5-201ENST00000377067 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
GPC5-201ENST00000377067 NCOA1Q15788 1441 aa25.72■■□□□ 1.71
GPC5-201ENST00000377067 RNF123Q5XPI4 1314 aa25.72■■□□□ 1.71
GPC5-201ENST00000377067 BRPF3Q9ULD4 1205 aa25.7■■□□□ 1.7
GPC5-201ENST00000377067 L3MBTL2Q969R5 705 aa25.69■■□□□ 1.7
GPC5-201ENST00000377067 RRP7BPQ9NSQ0 103 aa25.69■■□□□ 1.7
GPC5-201ENST00000377067 FMN1Q68DA7 1419 aa25.66■■□□□ 1.7
GPC5-201ENST00000377067 UBE2Q2Q8WVN8 375 aa25.66■■□□□ 1.7
GPC5-201ENST00000377067 KIF7Q2M1P5 1343 aa25.66■■□□□ 1.7
GPC5-201ENST00000377067 WASHC2CQ9Y4E1 1318 aa25.66■■□□□ 1.7
GPC5-201ENST00000377067 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
GPC5-201ENST00000377067 USP35Q9P2H5 1018 aa25.65■■□□□ 1.7
GPC5-201ENST00000377067 FOXD1Q16676 465 aa25.64■■□□□ 1.7
GPC5-201ENST00000377067 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
GPC5-201ENST00000377067 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
GPC5-201ENST00000377067 PDE4AP27815 886 aa25.62■■□□□ 1.69
GPC5-201ENST00000377067 EIF5BO60841 1220 aaKnown RBP25.62■■□□□ 1.69
GPC5-201ENST00000377067 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
GPC5-201ENST00000377067 POLR3GLQ9BT43 218 aa25.6■■□□□ 1.69
GPC5-201ENST00000377067 NBPF8Q3BBV2 869 aa25.59■■□□□ 1.69
GPC5-201ENST00000377067 DENND4BO75064 1496 aaPredicted RBP25.58■■□□□ 1.69
GPC5-201ENST00000377067 EXOC6Q8TAG9 804 aa25.57■■□□□ 1.68
GPC5-201ENST00000377067 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
GPC5-201ENST00000377067 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms