RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 ZNF777Q9ULD5 760 aaPredicted RBP20.43■□□□□ 0.86
UBQLN1-202ENST00000376395 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
UBQLN1-202ENST00000376395 MRS2Q9HD23 443 aa20.39■□□□□ 0.86
UBQLN1-202ENST00000376395 FBLN2P98095 1184 aa20.38■□□□□ 0.85
UBQLN1-202ENST00000376395 CUX2O14529 1486 aa20.37■□□□□ 0.85
UBQLN1-202ENST00000376395 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
UBQLN1-202ENST00000376395 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
UBQLN1-202ENST00000376395 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
UBQLN1-202ENST00000376395 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
UBQLN1-202ENST00000376395 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.85
UBQLN1-202ENST00000376395 RBM19Q9Y4C8 960 aaKnown RBP20.33■□□□□ 0.84
UBQLN1-202ENST00000376395 KIF21BO75037 1637 aa20.31■□□□□ 0.84
UBQLN1-202ENST00000376395 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
UBQLN1-202ENST00000376395 NBR1Q14596 966 aa20.3■□□□□ 0.84
UBQLN1-202ENST00000376395 FOXD1Q16676 465 aa20.3■□□□□ 0.84
UBQLN1-202ENST00000376395 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
UBQLN1-202ENST00000376395 EIF4G2P78344 907 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBQLN1-202ENST00000376395 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
UBQLN1-202ENST00000376395 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
UBQLN1-202ENST00000376395 B4GALNT3Q6L9W6 998 aa20.24■□□□□ 0.83
UBQLN1-202ENST00000376395 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
UBQLN1-202ENST00000376395 ARAP1Q96P48 1450 aa20.19■□□□□ 0.82
UBQLN1-202ENST00000376395 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
UBQLN1-202ENST00000376395 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
UBQLN1-202ENST00000376395 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
UBQLN1-202ENST00000376395 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
UBQLN1-202ENST00000376395 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
UBQLN1-202ENST00000376395 CCER2I3L3R5 266 aa20.13■□□□□ 0.81
UBQLN1-202ENST00000376395 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
UBQLN1-202ENST00000376395 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
UBQLN1-202ENST00000376395 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
UBQLN1-202ENST00000376395 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
UBQLN1-202ENST00000376395 BCL11AQ9H165 835 aa20.06■□□□□ 0.8
UBQLN1-202ENST00000376395 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
UBQLN1-202ENST00000376395 IGF1RP08069 1367 aa20.05■□□□□ 0.8
UBQLN1-202ENST00000376395 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
UBQLN1-202ENST00000376395 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.79
UBQLN1-202ENST00000376395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.798e-9■□□□□ 9.7
UBQLN1-202ENST00000376395 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
UBQLN1-202ENST00000376395 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
UBQLN1-202ENST00000376395 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
UBQLN1-202ENST00000376395 RRBP1Q9P2E9 1410 aaKnown RBP19.97■□□□□ 0.79
UBQLN1-202ENST00000376395 PRXQ9BXM0 1461 aa19.96■□□□□ 0.79
UBQLN1-202ENST00000376395 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
UBQLN1-202ENST00000376395 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
UBQLN1-202ENST00000376395 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
UBQLN1-202ENST00000376395 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
UBQLN1-202ENST00000376395 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
UBQLN1-202ENST00000376395 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
UBQLN1-202ENST00000376395 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
UBQLN1-202ENST00000376395 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
UBQLN1-202ENST00000376395 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
UBQLN1-202ENST00000376395 TSPY4P0CV99 314 aa19.84■□□□□ 0.77
UBQLN1-202ENST00000376395 TSPY10P0CW01 314 aa19.84■□□□□ 0.77
UBQLN1-202ENST00000376395 CUX1P39880 1505 aa19.83■□□□□ 0.77
UBQLN1-202ENST00000376395 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
UBQLN1-202ENST00000376395 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
UBQLN1-202ENST00000376395 CCDC18Q5T9S5 1454 aa19.82■□□□□ 0.76
UBQLN1-202ENST00000376395 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
UBQLN1-202ENST00000376395 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
UBQLN1-202ENST00000376395 WASHC2AQ641Q2 1341 aa19.8■□□□□ 0.76
UBQLN1-202ENST00000376395 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
UBQLN1-202ENST00000376395 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
UBQLN1-202ENST00000376395 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
UBQLN1-202ENST00000376395 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
UBQLN1-202ENST00000376395 FMN1Q68DA7 1419 aa19.79■□□□□ 0.76
UBQLN1-202ENST00000376395 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
UBQLN1-202ENST00000376395 DEKP35659 375 aaKnown RBP19.77■□□□□ 0.76
UBQLN1-202ENST00000376395 PKD2Q13563 968 aa19.77■□□□□ 0.76
UBQLN1-202ENST00000376395 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
UBQLN1-202ENST00000376395 RTN4Q9NQC3 1192 aaKnown RBP19.76■□□□□ 0.75
UBQLN1-202ENST00000376395 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
UBQLN1-202ENST00000376395 FGD6Q6ZV73 1430 aa19.74■□□□□ 0.75
UBQLN1-202ENST00000376395 ZNF644Q9H582 1327 aaPredicted RBP19.73■□□□□ 0.75
UBQLN1-202ENST00000376395 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
UBQLN1-202ENST00000376395 PLEKHD1A6NEE1 506 aa19.69■□□□□ 0.74
UBQLN1-202ENST00000376395 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
UBQLN1-202ENST00000376395 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
UBQLN1-202ENST00000376395 MSH5O43196 834 aa19.66■□□□□ 0.74
UBQLN1-202ENST00000376395 CFTRP13569 1480 aa19.66■□□□□ 0.74
UBQLN1-202ENST00000376395 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
UBQLN1-202ENST00000376395 TIAM1Q13009 1591 aa19.65■□□□□ 0.74
UBQLN1-202ENST00000376395 ARXQ96QS3 562 aa19.65■□□□□ 0.74
UBQLN1-202ENST00000376395 UACAQ9BZF9 1416 aa19.64■□□□□ 0.73
UBQLN1-202ENST00000376395 C11orf95C9JLR9 678 aaPredicted RBP19.64■□□□□ 0.73
UBQLN1-202ENST00000376395 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
UBQLN1-202ENST00000376395 WDR43Q15061 677 aaKnown RBP eCLIP19.63■□□□□ 0.73
UBQLN1-202ENST00000376395 NBPF8Q3BBV2 869 aa19.62■□□□□ 0.73
UBQLN1-202ENST00000376395 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
UBQLN1-202ENST00000376395 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
UBQLN1-202ENST00000376395 NEFMP07197 916 aa19.61■□□□□ 0.73
UBQLN1-202ENST00000376395 MAPKBP1O60336 1514 aa19.6■□□□□ 0.73
UBQLN1-202ENST00000376395 EIF5BO60841 1220 aaKnown RBP19.6■□□□□ 0.73
UBQLN1-202ENST00000376395 RGS3P49796 1198 aa19.6■□□□□ 0.73
UBQLN1-202ENST00000376395 ST20-MTHFSA0A0A6YYL1 179 aa19.59■□□□□ 0.73
UBQLN1-202ENST00000376395 ZBED9Q6R2W3 1325 aa19.58■□□□□ 0.72
UBQLN1-202ENST00000376395 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
UBQLN1-202ENST00000376395 MYOM3Q5VTT5 1437 aa19.57■□□□□ 0.72
UBQLN1-202ENST00000376395 PLIN1O60240 522 aa19.57■□□□□ 0.72
UBQLN1-202ENST00000376395 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms