RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
PPP1R3F-202ENST00000376188 CFAP43Q8NDM7 1665 aa28.2■■■□□ 2.1
PPP1R3F-202ENST00000376188 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
PPP1R3F-202ENST00000376188 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
PPP1R3F-202ENST00000376188 CCNB3Q8WWL7 1395 aa28.16■■■□□ 2.1
PPP1R3F-202ENST00000376188 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
PPP1R3F-202ENST00000376188 LRRC9Q6ZRR7 1453 aa28.13■■■□□ 2.09
PPP1R3F-202ENST00000376188 AQRO60306 1485 aaKnown RBP eCLIP28.11■■■□□ 2.09
PPP1R3F-202ENST00000376188 FYCO1Q9BQS8 1478 aa28.11■■■□□ 2.09
PPP1R3F-202ENST00000376188 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
PPP1R3F-202ENST00000376188 CLSPNQ9HAW4 1339 aa28.06■■■□□ 2.08
PPP1R3F-202ENST00000376188 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
PPP1R3F-202ENST00000376188 CASKIN1Q8WXD9 1431 aa28.06■■■□□ 2.08
PPP1R3F-202ENST00000376188 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
PPP1R3F-202ENST00000376188 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
PPP1R3F-202ENST00000376188 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
PPP1R3F-202ENST00000376188 FMN1Q68DA7 1419 aa28.03■■■□□ 2.08
PPP1R3F-202ENST00000376188 DHX57Q6P158 1386 aaKnown RBP27.98■■■□□ 2.07
PPP1R3F-202ENST00000376188 DIEXFQ68CQ4 756 aaKnown RBP27.94■■■□□ 2.06
PPP1R3F-202ENST00000376188 ZNF316A6NFI3 1004 aaPredicted RBP27.93■■■□□ 2.06
PPP1R3F-202ENST00000376188 SNAPC4Q5SXM2 1469 aa27.93■■■□□ 2.06
PPP1R3F-202ENST00000376188 PHLDB1Q86UU1 1377 aa27.92■■■□□ 2.06
PPP1R3F-202ENST00000376188 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
PPP1R3F-202ENST00000376188 WDR62O43379 1518 aa27.89■■■□□ 2.05
PPP1R3F-202ENST00000376188 ATP1B4Q9UN42 357 aaPredicted RBP27.88■■■□□ 2.05
PPP1R3F-202ENST00000376188 THOC2Q8NI27 1593 aaKnown RBP27.87■■■□□ 2.05
PPP1R3F-202ENST00000376188 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
PPP1R3F-202ENST00000376188 GRIN2BQ13224 1484 aa27.84■■■□□ 2.05
PPP1R3F-202ENST00000376188 ITGAEP38570 1179 aa27.8■■■□□ 2.04
PPP1R3F-202ENST00000376188 LRRIQ1Q96JM4 1722 aa27.8■■■□□ 2.04
PPP1R3F-202ENST00000376188 IQGAP2Q13576 1575 aa27.79■■■□□ 2.04
PPP1R3F-202ENST00000376188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.79■■■□□ 2.04
PPP1R3F-202ENST00000376188 RAB3GAP2Q9H2M9 1393 aa27.76■■■□□ 2.03
PPP1R3F-202ENST00000376188 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
PPP1R3F-202ENST00000376188 FAM50AQ14320 339 aaKnown RBP27.72■■■□□ 2.03
PPP1R3F-202ENST00000376188 MTUS2Q5JR59 1369 aa27.72■■■□□ 2.03
PPP1R3F-202ENST00000376188 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
PPP1R3F-202ENST00000376188 EHBP1L1Q8N3D4 1523 aa27.68■■■□□ 2.02
PPP1R3F-202ENST00000376188 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
PPP1R3F-202ENST00000376188 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
PPP1R3F-202ENST00000376188 FGD6Q6ZV73 1430 aa27.67■■■□□ 2.02
PPP1R3F-202ENST00000376188 HECW1Q76N89 1606 aa27.66■■■□□ 2.02
PPP1R3F-202ENST00000376188 ERCC6Q03468 1493 aa27.65■■■□□ 2.02
PPP1R3F-202ENST00000376188 UGGT2Q9NYU1 1516 aa27.64■■■□□ 2.02
PPP1R3F-202ENST00000376188 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.02
PPP1R3F-202ENST00000376188 MAPKBP1O60336 1514 aa27.61■■■□□ 2.01
PPP1R3F-202ENST00000376188 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
PPP1R3F-202ENST00000376188 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
PPP1R3F-202ENST00000376188 KIAA0586Q9BVV6 1533 aa27.56■■■□□ 2
PPP1R3F-202ENST00000376188 ARHGEF11O15085 1522 aa27.54■■■□□ 2
PPP1R3F-202ENST00000376188 GRIN2AQ12879 1464 aa27.53■■■□□ 2
PPP1R3F-202ENST00000376188 EPRSP07814 1512 aaKnown RBP27.51■■□□□ 1.99
PPP1R3F-202ENST00000376188 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
PPP1R3F-202ENST00000376188 MAGI3Q5TCQ9 1506 aa27.51■■□□□ 1.99
PPP1R3F-202ENST00000376188 KIAA0556O60303 1618 aa27.5■■□□□ 1.99
PPP1R3F-202ENST00000376188 PTPN23Q9H3S7 1636 aa27.47■■□□□ 1.99
PPP1R3F-202ENST00000376188 DISP1Q96F81 1524 aa27.44■■□□□ 1.98
PPP1R3F-202ENST00000376188 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
PPP1R3F-202ENST00000376188 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
PPP1R3F-202ENST00000376188 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
PPP1R3F-202ENST00000376188 CDK13Q14004 1512 aaKnown RBP27.4■■□□□ 1.98
PPP1R3F-202ENST00000376188 TCOF1Q13428 1488 aaKnown RBP27.4■■□□□ 1.98
PPP1R3F-202ENST00000376188 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
PPP1R3F-202ENST00000376188 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
PPP1R3F-202ENST00000376188 RAPGEF6Q8TEU7 1601 aa27.35■■□□□ 1.97
PPP1R3F-202ENST00000376188 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
PPP1R3F-202ENST00000376188 MIER1Q8N108 512 aa27.33■■□□□ 1.97
PPP1R3F-202ENST00000376188 TIMELESSQ9UNS1 1208 aa27.33■■□□□ 1.97
PPP1R3F-202ENST00000376188 MIA2Q96PC5 1412 aa27.33■■□□□ 1.97
PPP1R3F-202ENST00000376188 SCAF1Q9H7N4 1312 aaKnown RBP27.33■■□□□ 1.96
PPP1R3F-202ENST00000376188 NAIPQ13075 1403 aa27.31■■□□□ 1.96
PPP1R3F-202ENST00000376188 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
PPP1R3F-202ENST00000376188 UACAQ9BZF9 1416 aa27.31■■□□□ 1.96
PPP1R3F-202ENST00000376188 NEUROD1Q13562 356 aa27.29■■□□□ 1.96
PPP1R3F-202ENST00000376188 GCC2Q8IWJ2 1684 aa27.28■■□□□ 1.96
PPP1R3F-202ENST00000376188 NUP153P49790 1475 aaKnown RBP27.28■■□□□ 1.96
PPP1R3F-202ENST00000376188 NUP160Q12769 1436 aa27.26■■□□□ 1.95
PPP1R3F-202ENST00000376188 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
PPP1R3F-202ENST00000376188 SIN3AQ96ST3 1273 aa27.24■■□□□ 1.95
PPP1R3F-202ENST00000376188 CARMIL2Q6F5E8 1435 aa27.19■■□□□ 1.94
PPP1R3F-202ENST00000376188 CDK11AQ9UQ88 783 aaPredicted RBP27.19■■□□□ 1.94
PPP1R3F-202ENST00000376188 ARID3CA6NKF2 412 aa27.17■■□□□ 1.94
PPP1R3F-202ENST00000376188 FBLN2P98095 1184 aa27.15■■□□□ 1.94
PPP1R3F-202ENST00000376188 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
PPP1R3F-202ENST00000376188 TROQ12816 1431 aaPredicted RBP27.1■■□□□ 1.93
PPP1R3F-202ENST00000376188 JPH4Q96JJ6 628 aa27.1■■□□□ 1.93
PPP1R3F-202ENST00000376188 ADCY10Q96PN6 1610 aa27.1■■□□□ 1.93
PPP1R3F-202ENST00000376188 ITSN2Q9NZM3 1697 aa27.09■■□□□ 1.93
PPP1R3F-202ENST00000376188 PLB1Q6P1J6 1458 aa27.09■■□□□ 1.93
PPP1R3F-202ENST00000376188 PPP1R15AO75807 674 aaPredicted RBP27.08■■□□□ 1.93
PPP1R3F-202ENST00000376188 TONSLQ96HA7 1378 aa27.07■■□□□ 1.92
PPP1R3F-202ENST00000376188 RRP7BPQ9NSQ0 103 aa27.07■■□□□ 1.92
PPP1R3F-202ENST00000376188 YTHDC1Q96MU7 727 aaKnown RBP27.07■■□□□ 1.92
PPP1R3F-202ENST00000376188 CHIC2Q9UKJ5 165 aa27.06■■□□□ 1.92
PPP1R3F-202ENST00000376188 DAPK1P53355 1430 aa27.05■■□□□ 1.92
PPP1R3F-202ENST00000376188 ROCK1Q13464 1354 aa27.05■■□□□ 1.92
PPP1R3F-202ENST00000376188 PRG4Q92954 1404 aaPredicted RBP27.02■■□□□ 1.92
PPP1R3F-202ENST00000376188 KDM6BO15054 1643 aa27.02■■□□□ 1.92
PPP1R3F-202ENST00000376188 ABCA8O94911 1581 aa27.01■■□□□ 1.91
PPP1R3F-202ENST00000376188 ABCC5O15440 1437 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms